Clupea harengus (Atlantic herring): 105901221
Help
Entry
105901221 CDS
T09045
Symbol
mef2cb
Name
(RefSeq) myocyte enhancer factor 2cb isoform X3
KO
K04454
MADS-box transcription enhancer factor 2C
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
105901221 (mef2cb)
04371 Apelin signaling pathway
105901221 (mef2cb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105901221 (mef2cb)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, MEF-2
105901221 (mef2cb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
HJURP_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
105901221
NCBI-ProteinID:
XP_012684097
Ensembl:
ENSCHAG00000014511
UniProt:
A0A6P3VZN5
LinkDB
All DBs
Position
7:15128142..15201307
Genome browser
AA seq
521 aa
AA seq
DB search
MGRKKIQITRIMDERNRQVTFTKRKFGLMKKAYELSVLCDCEIALIIFNSTNKLFQYAST
DMDKVLLKYTEYNEPHESRTNTDIMETLRKKGLNGCDSPDADVEDSLGHSPESEDKYRKI
NEDIDLMISRQRLCAVPPSNYEMPVSIPVSNQNSLLYSHPGASLGNHNLLPLAHHSLQRN
NMSPGVTHRPPSAGGLMGTDLTTGAGTSAGKDGTPSYYRNGYGNHRNSPGLLVSSGGMNK
GMQAKSPPPMNLGMNNRKQDLRVLIPPGAKNNMPSINQRINNSQSAQSLATPVVSVATPT
LPGQGMGGYPSTISTSYGTEYSLSSADLSSISGFNSANSIHLGSMSGWQQQHLQNMQHSA
LSQLGNCTSSHLCQSTNLSLPSAQNLHIKSEPVSPPRDRAGSITPGGYAPPLPLQHPNQQ
HHHHQGQQQHQQQQQQQQHQGSSQAPPGRQDSGRSPVDSLSSCGSSHDGSDRDDHRNDFH
SPLGMTRAGVNGANGGGGGGGLDERHSPSLKRVRLSEGWAA
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaaaaagatccagatcacgcggattatggacgaacgcaacagacaggtgacg
ttcacaaagcgtaagtttggcctgatgaagaaagcctacgagctgagcgtgctgtgcgac
tgcgagatcgccctgatcatcttcaacagcaccaacaagctgttccagtacgccagcacc
gacatggacaaggtgctgctcaagtacaccgagtacaacgagccgcacgagagcaggacc
aacacagacattatggagacgttgagaaagaagggcctaaatgggtgtgacagccccgac
gccgatgttgaggactcgttgggtcacagcccggagtccgaggacaagtacaggaaaata
aacgaggacattgacctgatgatcagcagacagagactgtgtgctgttccgccctcaaac
tacgagatgccggtgtccatccccgtgagcaatcagaacagcctcctctacagccaccct
ggagcttccctggggaaccacaacctgctgccactggcacaccacagcctacagaggaac
aacatgtcccccggagtcacacacagacctcctagtgcaggtggcctgatgggcactgac
ctcaccactggcgcgggcaccagtgctggtaaggatggcacgccctcctactacagaaat
ggatatggtaaccaccgtaactctccgggcctgctggtgtcctccggcgggatgaacaaa
ggcatgcaggccaagtctcctccacccatgaacctgggcatgaacaaccgcaaacaagac
ctgcgcgtgctcatcccccctggagccaagaacaacatgccctctatcaaccagagaata
aacaactcacaatctgcacagtcgctggccacccccgttgtttccgtagcgacacccacc
ttacccgggcaagggatgggtggctacccatcgaccatctccacttcatatggcactgaa
tattctctgagcagtgcagacctctcctctatatcaggctttaacagcgccaacagtatt
cacctgggatcgatgagtggctggcagcagcagcacctgcagaatatgcagcattcagcc
ctcagtcagctaggaaattgcactagcagtcacttatgtcagagtaccaatctctccctg
cccagtgctcagaacctgcacatcaagtccgaacctgtttctcctcctagagatcgcgcc
ggcagcatcacccccgggggctacgctccccctctccccctccagcaccccaaccagcag
caccaccaccaccaggggcagcagcagcaccagcagcagcagcagcagcagcagcaccag
ggctcgtctcaggccccgccggggcgccaggactcgggccgctcgccggtggacagcctg
agcagctgcggcagctcgcacgatggcagcgaccgcgacgaccaccgcaacgacttccac
tcgccgctggggatgacgcgggcgggcgtcaacggggccaacgggggaggcggaggagga
gggctcgacgagcgccacagcccctcgctcaagcgcgtgaggctgtccgagggctgggcc
gcttga
DBGET
integrated database retrieval system
