Clupea harengus (Atlantic herring): 105901262
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Entry
105901262 CDS
T09045
Symbol
si:ch211-166a6.5
Name
(RefSeq) clustered mitochondria protein homolog
KO
K03255
protein TIF31
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
char03012
]
105901262 (si:ch211-166a6.5)
Translation factors [BR:
char03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
105901262 (si:ch211-166a6.5)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLU
eIF3_p135
TPR_10
TPR_12
TPR_NPHP3
CLU_N
TPR_4
GSKIP_dom
ANAPC3
Motif
Other DBs
NCBI-GeneID:
105901262
NCBI-ProteinID:
XP_031426563
Ensembl:
ENSCHAG00000026669
UniProt:
A0A6P8FDK2
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Position
7:17432009..17449907
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AA seq
1312 aa
AA seq
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MELQQVKGLKPGAALRLVEDPYSPRSARAHLARVQDLLRAEGPHDSLRDGRSPSILNTLT
HTHTTDAPPAGHSSKSLKRSASNTKTDQPGQETPPPEYILPGATELPPLATLLPADPHSE
VPTCLLDLSLSCWNPPPGPRKLQGDFLYISVHTREGRHFDITSCPRGFFLNRSTAEVFDP
RPAPSSAVCHCLSDLLSQISPEFKQNLTALRNRKQRSSEEALASLYRVLSWLGPASATHS
HRHTHSSPLAIQQHISPETPDWNEELQAARDLPHKTLEERLQRDRAIQQVNSAFVWAATQ
GAETVIDGCVEPINSAMDDPAFLWSGVFLSQGGAAGTLLGGERGKRAAQRLELRAVQTYS
QLEGELQGLHTLPTAVVDYRGVRLSAQALAPGLQGSEAGAPRGLLYGYTAGPMENPHRRK
LLELLAQSAKGLSLQRHAVVGPAGHQVPLFTSVDAQGLLGADGRYYVLDVFRTMPADANY
QRAEEEKSEEGKAEGMGQVEGEEAVVNSDLKETPGFPHGLCRLRLELVKAFIQNKNTQFT
QRVRERMEENGGVEECVKDGDPRGAEAVRGACRDVGSISDIIFEMRLNPNVFTPGVEFPS
SETAVIQHQKTLLREAGSFILTHQIPALLEDCLHCREMPIDGAALCHVLHERGINLRYLG
QLTTAISQSEDKNRLRHITRLAYSEIVLRSAKRIFNNFLQPVEVSSLSAAVSHFLCCLLV
PHHNPASPGEEPKKRSRRRGRGGGGASDSMAWSVFSGNELWSLIGQDAKVTYGLTEGLGT
SADHLVEHYGVQKMSLLREFCLKTGIQLRLRDYILDNRNKAPIGPDDVYNILPVVKHLTM
TTQDASRMFHAAQGYLQKGQLDRAYEQLKEAAYLFGRVCDDLHPKACSCLSLLAKAAYLQ
GRPAEARSVQLRVVVISERVLGFDHPNTIKQYALLAIYLYAGGETALAQRCLYRARLLLL
LVHGEDHPYIATLDSSLGLVLQGKQSIQFLQNALKINTFFRGPMDVKTALNHHLLAQKMC
VAEDYRGAMAQEREALTVFQNKCGEDHPQTKCSAEFLKAITQQAVRVERSLRQGGAELSD
SAALETLAPSADTTLEQLALVNGILKTSYSEKLLQLKEKLREQKASEEATDTKPETPETA
NGEQAEEQTTNEGEVAEGETTPTDGAAQEMTDQIAEGHVEETPSPEEKANGQLSTTAKAE
SPILNGNCSASDTDEEGGAGRNEDQSKLTNGEVSPTANGNQSDDAEPKVNGVSGSHDEED
NTKDGALTAVSKSGSKVGVSTETDTQSEATMINGGNNIMTNGEVAPARQDSE
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcagcaggtgaagggcctcaaaccaggggccgcactacgccttgtggaggac
ccctactctccacgttctgctcgtgctcatctggcaagggtgcaggacctcctgagagca
gaaggacctcatgactccctcagagatggcagatcccccagcattctcaacacactcaca
cacacacacaccacagatgccccccctgctggccactcctctaagagtctaaagcgctcg
gccagcaacaccaagacagaccagcccggccaggagaccccccctccagagtacatccta
cctggagctacagagctcccccctctggccactctgctgcccgcagacccacacagcgag
gttccgacctgtctgttggacctgtcactcagctgttggaacccgccccccggccccagg
aaacttcagggtgacttcctgtacatcagtgtgcacacgcgggaggggcggcactttgac
atcacctcctgtccccgtggcttcttccttaacaggtctacagctgaggtgtttgaccct
cgccccgccccctccagtgctgtctgccactgcctctctgacctgctgagtcaaatcagc
ccggagttcaaacagaacctcactgcactgagaaacagaaagcagcgttcatctgaagag
gcgttggcctctctgtaccgggtgttgagctggctgggacctgcctctgctacacactcc
cacagacatacccacagcagcccactggctatacagcaacacatcagcccagagactcca
gactggaatgaggaactgcaggcagccagagatctgccacacaagaccctggaggagaga
ctgcagagagacagagccattcaacaggtcaacagcgcctttgtatgggcagccacacag
ggggcggagactgtgattgatggctgtgtggagccaatcaatagtgctatggatgaccca
gccttcttgtggagtggtgtgtttctgagccagggcggagcagccggtactctcctgggc
ggggagagaggcaagagggctgcccagcgtctggagctcagggctgttcagacctacagc
cagctggagggggagctccagggtctccacacgctccccaccgcggttgtggactaccgc
ggggtgcgtctctccgcgcaggcccttgcccccggcctgcagggctcagaggccggggcc
ccccgtggcctcctgtacggctacaccgcggggcccatggagaacccgcaccgcaggaag
ctgctggagctcctggctcagtcggccaagggcctatccctgcagaggcacgctgtggtg
ggccccgccggccatcaggtgcccctcttcacctctgtggatgcccaggggcttctgggt
gcggacgggcgctactatgtgctggatgtcttccgtaccatgcccgcagatgccaactac
cagcgtgcggaggaggagaagagtgaagaaggcaaggccgagggcatggggcaggtggag
ggggaggaggcagtggtgaactctgaccttaaggagacacccgggttccctcacggactc
tgccgcctgcgcctcgagctggtcaaggccttcatacagaacaaaaacacccagttcaca
cagcgagtcagagaaaggatggaagagaacggtggggtggaagagtgtgtgaaagacggt
gatccacgaggggcagaggcagtgagaggggcatgtagagatgtgggctccatcagtgac
atcatctttgagatgcgcttgaaccccaatgttttcaccccaggagtcgagttccctagc
tctgaaactgcagtgatccagcaccagaagacattactgagggaagcaggctcattcatt
ctgacacaccaaataccagcactgttggaagactgtttgcactgccgagagatgcccata
gatggcgccgctctctgccatgtcctgcatgaaagaggaatcaacctgcggtacctgggt
cagctgaccacagccatcagccaatcagaagacaagaatcgtcttcggcacataacaaga
ttggcatacagcgagattgtattgcgttcagccaaaagaatcttcaacaacttcttacag
ccagtagaggtgtctagtctgtctgcagctgtcagtcatttcctctgctgtctactggtg
cctcaccataaccccgcctctcctggggaggagccaaagaaacgttccaggagacgtggg
cgtggagggggaggggcttccgacagcatggcctggagcgtgttcagcgggaacgagctg
tggagcctgattggtcaggatgccaaagtgacctacggtctcacagaaggactgggtacc
agcgctgaccacctggtggagcactatggagtgcagaagatgtctctactgagggagttt
tgtctaaagactggcatacagctcagactgagagactacatcctcgacaaccgtaacaag
gcgcccatcgggcccgacgacgtgtacaacatcctacctgtggtgaagcacctcaccatg
actacccaggatgcctcacggatgttccatgcggcccagggttacctgcagaagggccag
ttggacagggcttatgagcagctgaaggaggcggcctatctgtttggacgtgtgtgtgat
gaccttcaccccaaagcatgtagctgcctcagccttctggccaaagcagcctacctacag
ggccgtcctgcagaggctcgtagtgttcagctgagggtggtggtgatcagtgagagagtg
ctgggcttcgaccaccccaacaccatcaagcagtatgctctgttggctatatatctgtac
gctggcggtgagacggctctggcccagcggtgtctgtatcgcgcgcgtctcctcctgtta
ctggtgcacggagaggatcacccctacatcgccaccctggatagttcccttgggttagtg
ttacaggggaagcagtccatccagttcctgcagaatgccctcaaaatcaataccttcttc
agaggacctatggacgtcaagactgccctcaatcaccacctattggcccagaagatgtgt
gtagcagaagactatagaggagccatggcccaggagagagaagccctaacagtgttccag
aacaagtgtggtgaggaccacccgcagaccaaatgcagtgctgagtttctgaaagcaatt
acccagcaggctgtgcgcgtggaacgttcccttcgtcagggaggggccgagctttctgac
tctgccgcactcgagaccttggcgccctctgcagacactacattggaacagctggctctg
gtcaatggcatcctaaagacctcctacagtgagaaattgcttcagctcaaagaaaaactg
agagaacagaaagcatcagaagaagccacagacacaaaacctgaaaccccagaaacagcc
aatggagagcaagctgaagaacaaacaaccaatgagggagaggttgcagagggtgaaacc
acacccactgatggagcagcccaggagatgaccgatcaaattgcagagggccatgtggag
gaaactccttcacctgaggagaaagctaacggtcagttgagcactaccgctaaagctgag
tcgcccatcctcaatggaaactgctcagcaagtgacacagacgaagagggaggagctgga
agaaatgaggaccaatcaaaattaaccaatggagaagtaagccccacagcaaatggtaac
caatcagatgatgcagagccaaaagttaacggggtgtctgggtctcacgacgaagaagac
aacactaaagatggagcactgactgctgtgagcaaatcaggatcaaaggtgggtgtctcc
acagagacggatacccaatcagaagctaccatgatcaatggaggaaacaacatcatgacc
aatggtgaagtggcccctgcacggcaagactccgagtga
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