Clupea harengus (Atlantic herring): 105901343
Help
Entry
105901343 CDS
T09045
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105901343
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105901343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
bHLH_INO2
bHLH_NCOA
bHLH_NPAS4
PAS_8
Motif
Other DBs
NCBI-GeneID:
105901343
NCBI-ProteinID:
XP_031413768
Ensembl:
ENSCHAG00000001171
UniProt:
A0A6P8ED14
LinkDB
All DBs
Position
20:22171638..22193677
Genome browser
AA seq
631 aa
AA seq
DB search
MNICDDLMADQRMDISSTMSDFMSPGNPDLISSSIGAAGLDYTRKRKGSTTDYQFDGFSF
DDSMETDNDNQLCSTDQQGRIKNAREAHSQIEKRRRDKMNCFIDELAALVPTCNAMSRKL
DKLTVLRMAVQHMKTLRGAANPYTEANYKPAFLSDDELKQLILKATDGFLFVVGCDRGKI
LFVSESVYKILNYSQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVR
TDVAPGPSRLCAGARRSFFCRMKCNRPLIKMEDKDFSSTCSKKKADRKSFCTIHSTGYLK
SWPPTKMGVEEEEPDSEGCNLSCLVAIGRLHPHIQLPPAHTHIRVKPTEYVSRHAIDGKF
VFVDQRATAILAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKITTNCYKLKIKD
GSFITLRSRWFSFMNPWTKEVEYIVSTNTVVSVTVAEGGDPSYPQLSASPQSMDSMLTPG
DGRRALQTVPGIPGGTRAGAGKIGRMIAEEVMEIQRIRGSSPSSCGSSPLNMTNSTPPPD
THSPGGKKIQNGGTPDTPSAGLVSGPDSIGYPYSNNSLLSDSSHVGIDIMDEPGSSSPSN
DEAAMAVIMSLLEADAGLGGPVDFSDLPWPL
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atgaatatctgtgacgacctgatggctgaccagagaatggacatctcctccaccatgagt
gacttcatgtctccaggcaaccctgacctcatcagcagttccataggagccgctggcctc
gactacactcgcaagaggaaagggagcaccacagactaccaatttgatggcttttctttt
gatgacagtatggagacagacaatgacaatcagctgtgcagtactgatcaacaaggccgc
atcaagaatgcaagggaggcccatagtcagattgagaagcggcgccgtgataagatgaac
tgcttcatagacgagctggcggctctggtgcccacctgcaatgccatgagccgcaagctg
gacaaactcaccgtgctccgcatggctgtgcagcacatgaagacactacgaggtgctgct
aacccttacactgaggccaactacaaacctgcgttcctgtctgatgacgagttgaagcaa
ctcatactgaaggcaacggacggctttctcttcgttgtggggtgtgatcgggggaagatt
cttttcgtctcggaatctgtttataaaatcctcaactacagccagaatgatctgattggc
cagagcctgtttgattacctgcaccctaaagacattgccaaagtgaaggagcagctctca
tcctccgacaccgcccctcgggagcgactcattgatgccaagactggtctccctgtgagg
accgatgtggctccgggtccgtcccgactgtgtgccggagcacggcgctccttcttctgc
aggatgaagtgtaacagacccctcatcaagatggaggacaaggacttcagctccacctgc
tccaagaagaaagcggaccgcaagagcttctgcaccatccacagcacaggctacctgaag
agctggccgcccacgaagatgggcgtggaggaggaggagccggacagcgagggctgcaac
ctgagctgcctggtggccatcggacgcctgcacccgcacatccagctcccgcccgcacac
acacacatccgcgtcaagcccaccgagtacgtctcgcgccacgccatcgacgggaagttc
gtcttcgtagaccagagggccactgccatcctggcctacctgcctcaggagctgctgggc
acctccttttacgagtatttccaccaggacgacatcggacacctggccgagtgccacagg
caagtgctacagatgcgtgagaagatcaccaccaactgctacaagttgaagatcaaagat
ggctccttcatcacgctgcgcagtcgctggttcagcttcatgaacccctggacaaaagag
gtggagtacatcgtctccaccaacaccgtcgtctcggttactgtggcagagggaggggac
ccaagctacccccagctatcagcctcgccccagagcatggacagcatgctgacaccagga
gacggtaggcgggcactgcagacggtacccggtatccccggtggcacacgggcgggagct
gggaagatcggccgcatgatcgcagaggaagtcatggagatccagaggatccgaggctcc
tccccctccagctgtgggtccagccccctgaacatgaccaacagcacaccaccccccgac
acacactcacctgggggaaagaagatccaaaatggcggcactcctgacactccatctgca
ggtctcgtttcagggccagactccataggatacccctactccaacaactccctcctgagt
gacagctctcacgtgggtattgacatcatggacgagccgggctccagtagccccagtaac
gacgaggcagctatggccgtcatcatgagcttactggaggctgacgcaggactcggagga
ccagtggacttcagcgacctgccttggcctctctga
DBGET
integrated database retrieval system
