Clupea harengus (Atlantic herring): 105901363
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Entry
105901363 CDS
T09045
Symbol
trpc2a
Name
(RefSeq) short transient receptor potential channel 2
KO
K04965
transient receptor potential cation channel subfamily C member 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105901363 (trpc2a)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
105901363 (trpc2a)
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GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Motif
Other DBs
NCBI-GeneID:
105901363
NCBI-ProteinID:
XP_031430022
UniProt:
A0A6P8G3F0
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Position
9:complement(10185438..10190620)
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AA seq
853 aa
AA seq
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MENITADQWKVIVNKKLHFPPELIAAIHEGNVVLVSKLLSTGDGIIRQLDDSEDRLWREA
LNLSIRLGKENMMTTLFLGVKFDFRQIHEALLVAVDTNQPRVVKLLLDRLDQEKGNKMDV
RSFSTAIFDSSIDDSQFAPGVTPLTLACQKDLYDIVAMLTQRGHDIPLPHSISCICLECR
NARQYDLLKFSLSRINTYRGIASRAYLSVTAEDSMLSAFHLSRELRRLSKKEPEFKPQYL
HLEGLCQEFAVELLAMCRNQSEVTTILNNCESDSDDDVDDRTFDEGIPNLSRLRLAVNYN
QKQFVTHPICQQVLSSIWCGNLSWWRGSKTAWKLLVSLGIFLTMPFLCLVYWLAPKSKFG
KNMKIPVIKFLLHSASYMWFLITLLGESIFMEIYRDDFASRNQNFLHNSLHMVWVVGFFW
FECKEVWLEGLRSYFLDFWNILDMMVLSMYLASFALRVVIMLRGYIVCQDSNAVEECFYF
TESVRHDWRQEDPQFLSEILFAVTSMLSFTRLAYILPAHESLGTLQISIGKMIDDMMRFM
FLLMIIGTAFLCGLNNIYVPYVICPHLGKFNETINFLFWTMFGVANQDYVDMPAYVLAEF
MGRILYGVFTLVIVIVLLNMLIAMITNSFQKIEDDADVEWKFARSKLYLSYFREGLTMPV
PFNIIPSPKALFYAVRGTFRMLCCCCRVKSNPEYPPIASMSNSTLNNGGGQGESRLPYRV
QVMKALVQRYIETARREFEETKRKDVGNRITELSMVVGRVHAEMKNLHQTLASGLESQGI
TTNTEGSNVLSKYIMGAKNNFRGFDNKAAWQSGSSPLEVAVHIEDEQEQEEKKDEETRQE
KKDEGAKEGKTDE
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatcacggcagatcagtggaaagtgattgtgaacaaaaagttgcattttcct
cctgagctgattgctgccatccatgagggaaatgttgtgcttgttagcaagctgctgtcc
actggggacggcatcattcgccagctggatgactctgaagacagactatggagggaggcc
ctcaacctctccatccgcctgggcaaagaaaacatgatgaccaccctgtttctgggggtc
aagtttgacttccgtcagatccatgaagccctccttgtcgcagtggataccaaccagcca
cgggtcgtgaagctactgctagaccggcttgaccaggagaaaggcaacaagatggacgtg
cgctccttctcgacagccatctttgatagctcgattgacgactctcagtttgccccaggg
gtcactccgctaacgctagcctgccagaaagacctgtatgacattgttgccatgctgacc
cagaggggccacgacatccccctgccccattccatctcctgcatctgcctggagtgccgc
aacgctcgacagtacgacctgctcaagttctccctctcccgcatcaacacctacagagga
attgccagccgtgcctacttgtccgtcactgcagaggactccatgctcagtgccttccac
ctcagccgtgagctccgcaggctttccaagaaagagccagagtttaagccccagtacctg
catctggaggggttgtgtcaagagtttgctgtggagctccttgccatgtgccggaaccag
agtgaggtcaccaccatcctgaacaactgtgaaagtgatagcgatgacgacgtagatgac
cgaacgttcgatgaaggaatccccaacttatcccgcctgcgtctagccgtcaactacaat
caaaaacagtttgtgactcaccccatctgccagcaagttctctcctccatttggtgcggg
aatctctcctggtggagaggaagtaaaacggcatggaaacttctggtgtctctcggcatc
ttcctcaccatgcccttcctgtgtctcgtctactggttggcccccaagtccaagtttggg
aagaacatgaagatccctgtgattaaattcttgctccattctgcatcttacatgtggttc
ctaatcactctcctgggcgagtccatcttcatggagatttatcgagatgactttgcttca
cgcaaccagaacttccttcacaactctctacacatggtttgggtggttggtttcttctgg
tttgaatgtaaagaggtctggcttgaagggctcagaagctacttcctggacttctggaac
attctggacatgatggtgctcagcatgtacctggcctctttcgcactgcgagttgtcatc
atgttgaggggatacattgtgtgtcaggattcaaatgctgttgaagaatgtttttacttc
acagaatcagtgcgacacgactggcgacaggaggacccacagttcctctccgagatcctg
tttgccgtcaccagcatgctcagcttcacccgccttgcctacatcctgcctgcccatgag
tccctggggaccctgcagatctccatcggaaagatgattgatgacatgatgaggttcatg
ttcttgctgatgataattggaaccgcattcctctgtggactcaacaatatatatgtgcct
tatgttatctgtccacaccttgggaagtttaatgaaacaataaacttcctgttctggacc
atgtttggagtggccaaccaggattatgtggatatgccagcatatgtattagccgaattt
atgggaagaattctttatggggtattcactttggtaatagtcatcgtgcttctcaatatg
cttatagctatgattaccaattccttccaaaagattgaggatgatgctgatgttgaatgg
aaatttgctcgttctaaactgtacctgagctacttcagagagggcctcaccatgcccgtg
cccttcaacatcattccttcacccaaggccctgttctatgccgtgaggggcacctttcga
atgctttgctgttgttgcagagtcaagagcaatccagaatatcctccaatagcatcaatg
tccaacagcacactgaacaacggtgggggacaaggggagagccggttgccatatcgcgtg
caggttatgaaggccctggtccagcgttacattgagacggcacggcgtgagttcgaggag
accaagcgcaaagatgtggggaacaggatcacagagctgagtatggttgtgggaagagtg
cacgcggagatgaagaacctccaccagacccttgcaagtggtctggaaagccagggcata
accaccaacactgagggcagcaacgtcctcagcaaatacatcatgggagccaaaaacaac
ttccggggcttcgacaacaaggcggcgtggcaaagcggctcctcacctctggaggtggct
gtgcacatagaggatgagcaggaacaggaggaaaagaaggatgaagagacaaggcaggaa
aagaaagatgaaggggcaaaagagggaaagacagatgaa
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