Clupea harengus (Atlantic herring): 105901367 Help Entry 105901367         CDS       T09045                                  Name (RefSeq) integrin alpha-V-like isoform X1   KO K06487   integrin alpha V Organism char  Clupea harengus (Atlantic herring) Pathway char04081   Hormone signaling char04145   Phagosome char04148   Efferocytosis char04510   Focal adhesion char04512   ECM-receptor interaction char04514   Cell adhesion molecules char04810   Regulation of actin cytoskeleton char04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:char00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04081 Hormone signaling     105901367    04512 ECM-receptor interaction     105901367    04514 Cell adhesion molecules     105901367  09140 Cellular Processes   09141 Transport and catabolism    04145 Phagosome     105901367    04148 Efferocytosis     105901367   09144 Cellular community - eukaryotes    04510 Focal adhesion     105901367   09142 Cell motility    04820 Cytoskeleton in muscle cells     105901367    04810 Regulation of actin cytoskeleton     105901367  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04131 Membrane trafficking [BR:char04131]     105901367   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:char04147]     105901367    04515 Cell adhesion molecules [BR:char04515]     105901367    04090 CD molecules [BR:char04090]     105901367 Membrane trafficking [BR:char04131]  Endocytosis   Phagocytosis    Integrins (complement receptors)     105901367 Exosome [BR:char04147]  Exosomal proteins   Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)    105901367   Exosomal proteins of epithelial cells    105901367 Cell adhesion molecules [BR:char04515]  Integrins   Integrin alpha subunits    105901367 CD molecules [BR:char04090]  Proteins   105901367 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Integrin_A_Ig_3 Integrin_A_Ig_2 Integrin_A_Ig_1 FG-GAP FG-GAP_3 ITGAX-like_Ig_3 Integrin_alpha PAG Motif Other DBs NCBI-GeneID:  105901367 NCBI-ProteinID:  XP_031429192 Ensembl:  ENSCHAG00000017384 UniProt:  A0A6P8G158 LinkDB All DBs Position 9:complement(11014249..11026951) Genome browser AA seq 1044 aa AA seqDB search MGTLFVYLHTFLALLFQCLQSSAFNLDISNPLVHSGPPDSYFGFSVDFFRPDNQFNLLVG APKSNTSVSAAVVERGAVYSCPWQIATKCQQIEFDNTDDRNNSLGMEFKSRQWFGATVRS DGEHILACAPLYQWSTPEFSDRETVGTCYLKKGGKIVEYSPCRRKSHKPSGQGFCQAGFS ANFVKNEKNRVVVGGPGSFYWQGQLISDDISEVLSRVNNLYITPYGNQLSTTEGSPLFDD SYLGYSLAVGDFDGDGQDDYLTGVPRGHKVVGYVTIFNGRNMESMANFTGTQMAAYFGHS VATADINNDGHLDVFAGAPLFMSRTSDDKLRELGQVSVYLGLAGFSFQQPVHLNGFEAYA RFGSAIASLGDLDLDGYNDIAISAPYGGADEKGLVYVYNGQASGIGLVASQVLQGQWAST STLSPSFGYSLQGATDIDQNGYPDLIVGVFGADKAVLYRARPVISTNLTLEINPQVLNLE DKTCQLPGTTTAVTCFKVKYCVQAKARYIKGLVELNVQVDVQLDWLKHKGTKRAQFLLNK TSKHTSNITVLLTNEPNCQQLEAFVIDDSNFRDKITPLSVFLDYRIDYDSAEDSTGLIPV LTQLSPTNASRQAHILLNCGDDNICKPDLRLTVKSDKKQMNIGDEHPLTLDVVAENLGEG AYEAELHVYIPPQADFIGTVRKEGQPRLSCAYRRENQTREVVCDLGNPMKSGTSLSTSLR FGVHHLSDQDTQVKFDLQIHSSNEFNGSSDLVSSITKLAVLARMEIRSASVPTQVILPIA NWKPKDPPVTEDDIGPMVQHIYELRNNGPSVISKAVIDIHWPSSFSNGSLLYITAFDHEG NIQCRANTQINPLNLTSPRVESNDTVPGGGDNRGEARTRTRRDVTDKSADAAALRVILDC DTALCLQIKCEVGRLERGQRAIVLIKSRLAVSTFLKTETQNGLYSVVSSASFNVTEMPYK QLVTELPYNSTTTSTIVESLLTGQQLPVPAWIIALAILAGLLALALLIFIMYKCGFFKRS RPPQEDHEKEQLQPPESGEGNAET NT seq 3135 nt NT seq  +upstreamnt  +downstreamnt atgggaacactttttgtttatttgcacacgttcctggctttactatttcagtgtttacaa agtagtgcatttaacttggacatttccaaccctttagtgcattcggggccacctgatagc tactttggattttcagtggatttcttcagaccggataaccagtttaacctccttgttgga gccccgaaatctaatacatctgtatcagctgctgtggtggagcgtggagctgtgtacagc tgcccttggcaaattgcaacaaagtgccagcagattgaatttgacaacacagatgatcgt aacaattctctggggatggagtttaagtcccgtcagtggtttggtgctaccgtgcgttcg gatggcgaacacatactggcctgtgctcctctgtatcagtggtctacccccgagttctct gaccgtgagactgttggaacctgttatctcaagaaagggggaaagattgttgagtactcg ccttgtcgcagaaagtcgcataaacctagtggtcaaggattctgccaggctggcttcagc gcaaactttgtgaaaaatgagaagaacagagtggtggttggaggaccaggtagcttctac tggcaagggcagctgatctctgatgacatttcagaagtccttagtagggtcaataacctg tacatcacaccatatgggaaccagctttccacaacagagggtagtccccttttcgacgac agttaccttggatattctcttgcagttggtgatttcgatggtgatggacaagatgactac cttaccggggtgcccagaggacacaaagttgttggctatgtcaccatatttaatggaaga aatatggagtccatggcaaacttcactggaacacagatggcagcctactttggccattcc gtggcaacggctgatataaacaatgatggacacctggacgttttcgcaggagctcccctc tttatgagtcgaacctctgacgataaactccgggagcttggacaggtgtctgtatatttg ggccttgccggattttctttccagcaaccggtccacctaaatggcttcgaagcatatgca cgcttcggcagcgccattgcctcacttggtgatcttgacctcgatggatacaatgacata gccatctctgctccttatggaggtgctgatgagaagggtttggtgtatgtgtataacggg caagccagtggcataggcttggtagcctctcaggtcctgcagggccagtgggcttcaaca tccacactttcaccaagcttcggctactcgctgcaaggagcaactgacattgaccaaaat ggctacccagatttgatagttggagtctttggagctgataaagcagtgttgtacagagct cgccccgtcatttccacaaatctaactttggagatcaatcctcaagtcctaaacttagag gacaagacctgccagcttcctggtacaactacagctgtcacctgtttcaaggtcaagtac tgtgtgcaggccaaggccaggtatataaaggggcttgtagaattaaatgtgcaggttgat gtgcagctcgattggctcaaacataaggggacaaagagagctcagtttctgctcaacaaa acatccaagcacacaagtaatatcaccgtgctcctcaccaacgaacctaactgtcagcaa ctggaggcctttgtcattgatgattcaaacttccgggataagatcacgcccctctcagtc tttttggattataggatagattatgacagtgcggaagactcaacaggactcatacctgtc cttacccagctcagcccaaccaatgcatccagacaggctcatattttactgaactgtgga gatgataacatttgtaaaccagatctacggttgactgtgaaaagtgacaagaagcagatg aatataggtgatgagcaccctctgactctggatgtcgtagctgagaacctgggtgaaggg gcgtacgaagcagagcttcacgtctacatcccccctcaggcagactttattggaacagtc cgaaaggagggccagcctcgtctgtcttgtgcctacagacgggaaaaccagaccagggag gtggtgtgtgatctcgggaaccccatgaaatcaggaacttctctgtcaaccagcctgcgg tttggtgtccatcatctgtctgatcaggacactcaagtgaagtttgatctgcagatccac agctccaatgagttcaatggcagcagtgacttggtctccagcatcaccaaactggctgtt ttagctaggatggaaatacgcagtgcatcagtacccactcaggtcattcttcccattgca aactggaaacctaaagacccaccagtaacagaagatgacattggtccaatggtacaacat atatatgagttgcgtaacaatggcccaagtgtgatcagtaaggctgtgatagatatacac tggccttctagcttcagcaatggaagcctgctctacatcaccgcatttgaccatgagggg aacatacagtgccgtgcaaatacccagattaaccctctgaacctcacaagtcctcgtgtg gagagtaatgatacagtcccaggtggtggagacaaccggggagaggcacggacgcggact cgccgtgatgtcacagacaaatcagcagatgccgcagcactccgggtgattttggattgt gacacagcattgtgtttacaaataaaatgtgaggtgggtcgtctggaaagaggacagcgt gccattgtattaattaaatcacgactcgctgtctccaccttcctcaagacagaaactcaa aatgggttgtatagtgttgtttcatctgcctccttcaacgtaacagagatgccatataaa cagctggtgactgagctaccatacaactcgaccactacaagcactattgtggagtcactg ttgactggtcagcagttgccagttcctgcatggataatcgcgctggctattctggcagga cttctagcgctggctctgctcatcttcatcatgtacaagtgtggtttcttcaagcgaagc cgtcccccacaggaagaccatgagaaagagcagctccagccgccagagagtggagaaggc aatgcagagacctga

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