Clupea harengus (Atlantic herring): 105901391
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Entry
105901391 CDS
T09045
Symbol
limk1a
Name
(RefSeq) LIM domain kinase 1a isoform X1
KO
K05743
LIM domain kinase 1 [EC:
2.7.11.1
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
105901391 (limk1a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
char01001
]
105901391 (limk1a)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
105901391 (limk1a)
Protein kinases [BR:
char01001
]
Serine/threonine kinases: TKL group
LISK family [OT]
105901391 (limk1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
LIM
PDZ
Kdo
PDZ_6
RIO1
ABC1
PDZ_2
Haspin_kinase
APH
Motif
Other DBs
NCBI-GeneID:
105901391
NCBI-ProteinID:
XP_012684287
Ensembl:
ENSCHAG00000018308
UniProt:
A0A6P3VYL2
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All DBs
Position
9:11136708..11177419
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AA seq
658 aa
AA seq
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MRLMLLCCTWKDERMGEQEAGGSLPVCAGCRQRIYDEQYLQALNTDWHTVCFRCCECSTS
LSHWYYEKDGRLFCKKDYWAKFGELCHGCTEPISTGLIMVAGEQKYHPECFTCLNCRSFI
GDGDTYALVERSKLYCGHCYYQTIVTPVTLPDSPCSKIPHTVTLVSIPASTDGKRGFSVA
IDQSSIPNSFGPDHIPTVRVSEVDRELISPDVKNAIHVGDRILEINGTPIRNVPLDEIDL
LIQETSRLLQLTIEHDPHDHGGSQDHLDGPSPLSQVSSPVSPITSPPNLDVNNLRSRVIT
RSYSIDKSPCSSNTASPMSQRKDIGRSESLRVVSNHTHRIFRPSDLIHGEVLGVGCFGQA
IKVTHKETGEVMVMKELIRFDDETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFIA
EYIKGGTLREIIKKMDSNFPWNQRVSFAKDIASGMTYLHSMNIIHRDLNSHNCLVRDNNS
VVVADFGLARLMVEDKNQGKLPLGNPQGLKKPDRRKRYTVVGNPYWMAPEMIHGKSYDEK
VDIFSFGIMLCEIIGRVNADPDYLPRAMDFGLNVKGFLEHFCPPGCPPPFFPIAALCCDL
DAEKRPAFTKLEEWLENLKLHLEIRLPLVSELEQLSRDFWQKHPPSENGLHPHPEQPE
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgaggttgatgcttctctgttgtacctggaaggacgaacgcatgggagagcaggaagct
ggtgggagcttgcctgtgtgtgcgggatgccgacagcgcatctacgatgagcagtacctc
caggccctgaacacagactggcacaccgtttgcttcaggtgttgtgaatgcagcacctcc
ctgtcccactggtactatgagaaggatggtcggctcttctgcaagaaggactactgggcc
aagttcggcgagctgtgccacggctgcacggagcccatcagcacaggtctcatcatggtc
gcgggagagcagaagtatcaccccgagtgtttcacctgcctgaactgtcggagcttcatc
ggagatggcgacacgtacgcccttgtggagaggtccaagctctactgtggccattgctac
taccagaccatcgtcaccccggtgacgctccctgactccccgtgttcaaagatcccccac
actgtgaccctcgtgtccatcccggcgtccaccgatggcaagcgcggcttctccgtcgcc
atcgatcagagctccattcccaacagcttcggccccgaccacatccccacagtgagagtt
tcagaagtggaccgagaactcataagtcctgatgtgaagaacgccatacatgttggtgac
aggatcctcgagattaatggaaccccaatccggaatgttcctctcgatgagattgacctg
ctgatccaggagacgagtcgtctgctgcagctgaccattgagcacgacccccatgaccat
ggcgggtcacaggaccatctggacgggccgagccccctgtctcaggtgtccagtcccgtg
tcccccatcacttctccccccaacctcgatgtcaacaacctccgctcccgcgtcatcacg
cgcagctacagcattgacaaatccccctgctccagcaacacggcctcgcccatgtcccag
cggaaggacatcgggcgctcagagtccctgcgcgtggtgtccaatcacacgcacagaatc
tttcgaccctctgacctcatacacggagaggttctgggggtgggctgctttggtcaggct
atcaaggtgacccacaaggagacgggggaggtgatggtgatgaaggagctgatccgcttt
gatgacgagacccagaggaccttcctcaaggaggtgaaggtgatgcgctgcctggaacac
cccaacgtgctcaagttcatcggcgtgctctacaaagacaagcggctcaacttcatcgca
gagtacatcaaaggaggaaccctgagggagatcattaagaaaatggatagcaactttcca
tggaaccagcgagtgagttttgcaaaggacattgcttcaggcatgacctacctgcattcc
atgaacataatccaccgagacctgaactctcacaactgcctcgttcgagacaataacagt
gtagtggtggcagactttgggctcgccaggctcatggtggaggacaagaaccagggcaag
ctgccgctgggcaacccccagggtctgaagaaacctgaccgcaggaagaggtacacggtc
gtgggcaacccctactggatggcaccagagatgatccatgggaagagttacgacgagaaa
gtcgacatcttctctttcgggattatgctttgtgagatcatcgggcgggtcaacgcagat
ccagactatcttccccgagcgatggacttcgggctgaacgtgaaaggcttcctggaacac
ttctgccctccggggtgcccgcctcctttcttccctattgctgctttgtgctgcgacctg
gatgcagagaaaaggccagcctttactaagttggaggagtggctggagaacctgaagttg
cacctggaaatccgcctgccgctcgtctcggagctggagcagctcagccgggacttctgg
cagaagcacccgccctccgagaacgggctgcacccccacccagagcagcccgagtag
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