Clupea harengus (Atlantic herring): 105901400
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Entry
105901400 CDS
T09045
Name
(RefSeq) F-box only protein 39
KO
K10314
F-box protein 39
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105901400
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
105901400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
F-box_5
Motif
Other DBs
NCBI-GeneID:
105901400
NCBI-ProteinID:
XP_012684299
Ensembl:
ENSCHAG00000023493
UniProt:
A0A6P3VXY3
LinkDB
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Position
9:complement(11422369..11424955)
Genome browser
AA seq
488 aa
AA seq
DB search
MEYLEEVQESLSEDEGCDTDGHQDGGEDEIDKMRKEKLEEDKECGHQSVWAHLPDTCLRE
VFLYLRDRDRVRAALVCHHWHHVVRSPSLWRVRTFNFSGRASRAHRSEMDTAVSFAKTYG
GFLEDLEIRFSHPINSLVTRRFQQTMRAFLSALRKTRGRLRSLTIKHMDLDRTAWCRSVR
SSLVRSLTFYLRRDGSYLNYLNFRGARFNLQQGLEVLEAVAAAQQHMHLGRRPGIAGLNM
EDFFSQSLPVYSSPGFAEVMHRFKGLGSLTINYSCLSDQLLEALAVACRGLDNSGSLRTL
TVRCHIQEPHSQGIWGSSWSNLAKCCPDLHVNMSVERILSPEGLSRILLNEIPVRDLHLS
SWYFSEQEWSAKPALTQVVPWYRYSLQKLSLDLNNSHEKVDEELMELILMCKKLAYLKVW
AFLDINFLERLLQNRMEKKSMLKTIKVRIYTNKYETQEEDEQLDEILLRYSTLIDSELNY
FAISYPML
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atggagtatcttgaagaagtccaggaaagtctttcagaggatgaaggctgcgacactgat
ggacatcaggatgggggagaggatgaaattgacaaaatgaggaaagagaagttagaggag
gataaagaatgtggacatcagtctgtgtgggcccatctcccggacacgtgcctgagagag
gtgtttctgtatctccgggaccgtgaccgggtgcgtgctgctctggtgtgtcatcactgg
caccacgtggtgcgctctccctccctctggcgggtgcgcaccttcaacttctcgggccgt
gcgtcgcgagcccaccgctctgagatggacactgccgtcagcttcgcgaagacgtacggc
ggcttcttggaggacctggagatccgcttctcgcacccgattaactctcttgtgacgcgg
cgcttccagcagaccatgcgggcgttcctgtccgccctgcgcaaaacacggggtcgcctg
cgctccctcaccatcaaacacatggacctggaccgcacggcttggtgccgcagtgtgcgc
agcagcctagtacggagtctgaccttttacctgcgcagggacggctcctacctgaactac
ttgaacttcagaggggccaggttcaacctgcagcagggcctggaggtcctcgaggcagtc
gccgcagcccagcagcacatgcaccttggtcgacgtcctggaatcgcaggcctgaacatg
gaggactttttctcccagtccctccctgtatacagcagccctggctttgcagaggtcatg
cacaggtttaagggactaggttccctcacgattaactatagctgcctgtcagaccagcta
ctggaggctttggcggtggcttgcagaggtttggacaacagcggatcgctgcgtactctc
acggtgcgctgtcacatccaagagccccacagccaggggatctgggggagctcctggtcc
aacttggctaagtgctgccctgatctccacgtaaacatgtccgtggagcgcatcctgagc
ccggaaggtctgagccgcatcctgctgaatgagatccctgtgcgagacctgcatctctcc
agctggtacttcagtgagcaggagtggagcgccaaacctgctctgacccaggtggtgccc
tggtatcgatatagcttacagaagctgagtctagacttgaacaacagtcatgaaaaggtt
gacgaggaactaatggagttgattttgatgtgcaaaaagttagcctacttaaaggtctgg
gccttcctggacatcaacttcctggagaggctcctccagaaccgcatggaaaagaaaagc
atgctcaaaaccataaaggtgcgaatctacacaaacaagtatgagacccaggaagaggat
gaacagctggatgagattctcctgcgctacagtacactcatagactcagagctcaactac
tttgccatctcctacccaatgctctaa
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