Clupea harengus (Atlantic herring): 105901410
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Entry
105901410 CDS
T09045
Symbol
slc6a4a
Name
(RefSeq) solute carrier family 6 member 4a
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105901410 (slc6a4a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105901410 (slc6a4a)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105901410 (slc6a4a)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
105901410
NCBI-ProteinID:
XP_012684313
Ensembl:
ENSCHAG00000023738
UniProt:
A0A6P8FM19
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Position
9:11515038..11528624
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AA seq
645 aa
AA seq
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MEMKQSMMSTENEGEKDKPEGSQENGLLMGDNAAEKGQKVNSGPGQGSNGYPSTSPQSPR
EGVTGEGSWGSGPGPLRTLVVQQTSLDPPRETWNKKMDFLLSVIGYAVDLGNVWRFPYIC
YQNGGGAFLLPYLLMAVFGGVPLFYMELALGQFHRSGCISIWRHVCPIFKGIGYAICIIA
LYIAFYYNTIMAWALYYLLSSFRSTLPWTSCTNSWNTVNCTQYLSTDMNVSWTNASISPA
EEFYTRHVLQVHRSPGLHDLGSVNWQLALCLLFIFTIVYFSIWKGVKTSGKVVWVTATFP
YLVLLILLVRGATLPGAWRGVVFYLKPNWEKLLTTTVWIDAAAQIFFSLGPGFGVLLAFA
SYNPFHNNCYKDALVTSSVNCLTSFLSGFVIFTVLGYMAEMRKQGVETVAKDAGPSLLFI
IYAEAIANMPAATFFAIIFFLMIIMLGLDSTFAGLEGVITAMLDEFPHLLVKRREWFVLG
LVCVCYLGAISTLTYGGAFVVKLFEEYATGPAVITVVFLEVIAVSWFYGTSRFCSDVQLM
LGFAPGWFWRVCWAVICPCFLLFIIGSFLVFPPDVKLFHYNYPFWTTVLGYCIGVSSFIC
VPAYMVYLLLTTKGTFKQRLLKSITPEVREVDGGPHRDIIITNAV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggagatgaaacagtcgatgatgagcacagaaaacgagggagaaaaggacaaacctgag
ggatcgcaggagaacggactacttatgggagacaatgccgcggagaaaggtcagaaggtc
aactccggtcccgggcagggctccaatgggtacccaagcacctcgcctcagagcccgagg
gagggggtcacgggcgaggggagctggggaagcggcccagggcctctcagaaccctggtg
gtccagcagaccagtctggacccgccccgcgagacgtggaacaagaagatggattttctg
ctgtccgtgattggatatgccgtggacctgggcaacgtctggcgttttccatacatctgt
taccagaatggaggaggtgcgttcctcctgccctacctgctgatggcggtgttcgggggc
gtgccgctcttctacatggagctggcgctgggacagttccaccgcagcggctgcatctcc
atctggaggcacgtatgccccatcttcaagggcataggctatgccatctgcatcattgcc
ttgtacattgccttttactacaacaccatcatggcttgggctctgtactacctcctgtcc
tccttccgctccaccctgccgtggaccagctgcaccaacagctggaacaccgtcaactgc
acccagtacctgtccaccgacatgaacgtgtcctggaccaacgcctccatctctcctgcc
gaggagttctatacgaggcatgttctgcaggtgcaccgttctccgggtctgcatgatttg
ggttcggtgaattggcagctggccctatgcctgctcttcatcttcaccatcgtctacttc
agcatctggaagggcgtcaagacctcaggcaaggttgtgtgggtgacggcgaccttcccg
tacctggttctgctcatcctgctggttagaggagccactctccctggtgcgtggaggggt
gtcgtcttctacctgaagcctaactgggagaagcttctcaccaccacggtatggatagac
gcagctgcgcaaatcttcttctctttgggcccagggtttggtgtgcttttggcctttgcc
agctacaacccatttcacaacaactgttacaaagatgctctggtgacgagctcagtgaac
tgtctgacgagcttcctctcaggctttgtgatcttcaccgttctcggctacatggctgag
atgcgcaaacagggcgtggaaactgttgctaaggacgcaggcccgagtcttttgttcatc
atatatgccgaggccattgcgaatatgccggctgccactttcttcgcaattatcttcttc
ctcatgatcatcatgctaggcttggacagcacgtttgctggcctggaaggggtgattact
gccatgctggatgagttccctcacctcctggtcaagaggagagagtggtttgttctgggc
cttgtgtgtgtttgctacctgggagcaatctccacactaacctatggaggggcattcgtg
gtgaagctgtttgaggagtatgcaactggcccggccgtcataactgtggtcttcctggag
gtcattgctgtttcttggttttatgggacatcgcgtttttgcagtgacgtgcagctgatg
ctgggctttgccccaggctggttttggagagtgtgctgggcggtcatctgtccctgcttc
ttgctgttcatcatcggtagttttttagtcttccctcctgatgtgaagttgttccactat
aactaccccttctggaccactgttcttggctactgcattggcgtctcctcattcatctgt
gtgcccgcatacatggtttacctcctgcttaccaccaaagggaccttcaagcagaggctc
ctgaagagcatcacaccggaggtcagagaagtggacggcggccctcacagagacatcatc
atcaccaacgccgtgtga
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