Clupea harengus (Atlantic herring): 105901451
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Entry
105901451 CDS
T09045
Symbol
rnf115b
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105901451 (rnf115b)
04121 Ubiquitin system [BR:
char04121
]
105901451 (rnf115b)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
105901451 (rnf115b)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
105901451 (rnf115b)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
105901451 (rnf115b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-RING_2
zf-C3HC4_2
zf-RING_11
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
Zn_ribbon_19
zf-C3HC4_3
VPS18_RING_C
zf-Nse
HypA
Rad50_zn_hook
Motif
Other DBs
NCBI-GeneID:
105901451
NCBI-ProteinID:
XP_012684363
Ensembl:
ENSCHAG00000013044
UniProt:
A0A6P3VY11
LinkDB
All DBs
Position
19
Genome browser
AA seq
291 aa
AA seq
DB search
MAEAAMVPQHRFYCHCCKGEIDPKLPEFVCPTCESGFIEEVAEGSSLLATGDTTAANDDV
GSQFTELWQLLFMERSALLDDPTSAAPLPSSDRADRRTQVETLPSAPSEPEPPAQQDAQQ
RTRARPDRGPAMEGIVQQFLAGLFGNNGNPGSVPSSWSLHSNPGDYAWGQGGLDSVITQL
LGQLENTGPPPAEKEMISSLPTVAVSQEQAACRLECPVCREEYAAEESVRQLPCQHYFHS
DCIVPWLQLHDTCPVCRKSLNGEDYSLQPEPYAQVLEPSPVTAETQGGTAL
NT seq
876 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggctgcaatggttccccaacaccgcttttactgtcactgctgtaaaggtgaa
atcgatccaaaactcccggagtttgtttgccccacatgtgagtctggatttatcgaggaa
gtggcagaagggtcaagtcttttggcaactggggacaccactgcagccaacgatgatgtt
ggctcccagtttacagagctgtggcagctgctcttcatggagcgctcggccctcctcgac
gaccccaccagcgctgcgcctctccccagcagtgacagagccgaccggaggacccaggta
gagacactgccctctgcaccctcagagccagaacctccagctcagcaggatgcccagcaa
aggacacgggccagaccggaccgggggccggcgatggaagggattgtacagcagtttctg
gctggtttgtttggcaacaacggaaacccaggttctgtgccatcctcatggtctctgcac
tcaaacccaggggactatgcatggggccagggtggcttagattctgtcattacacagttg
ttgggtcaattagagaacaccggccctccccctgccgagaaagagatgatctcatcgctc
cctactgtagccgtttctcaggaacaggctgcgtgtagacttgagtgcccagtttgtcgg
gaggaatacgcagcagaggagagtgtccggcagctgccctgccaacattatttccatagc
gactgcattgtgccatggttacagctgcacgacacgtgtccagtgtgccggaagagtctg
aacggggaagactacagtttacagccggagccctatgcccaggttctagagcccagccca
gtgactgcggagacccagggaggaacagccctttga
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