Clupea harengus (Atlantic herring): 105901518
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Entry
105901518 CDS
T09045
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105901518 (npas1)
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
105901518 (npas1)
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Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_4
PAS_9
HLH
Adeno_terminal
Motif
Other DBs
NCBI-GeneID:
105901518
NCBI-ProteinID:
XP_031429826
UniProt:
A0A6P8G259
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Position
9:complement(25983319..26041052)
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AA seq
840 aa
AA seq
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MATMPFVSEGKCVSVEWDFLQGLLAKPPTLPCLQNLRKEKSRNAARSRRGKENFEFFELA
KMLPLPGAITSQLDKASVIRLTISYLHMRHFANQGDPPWIPLMEGENHCAKVRRTINSLA
MDIFELHHGAHLLQSLDGFVFVVSQEGRFLYISETVSIYLGLSQVELTGSSVFDYIHPAD
HVEMAERLGIKPHLRAEAGCHMTNESASSSASTPSLAGTPEPAPSSPFTPADELRDRGFF
IRMKSTLTKRGLHIKSSGYKVIHVTGRIRCRPALVHGSGRSLYRPLGLVALAHTLPPSTL
NEVRMEAQMFVFRVNMDLQVTYCENRITEYMDLSPAEVVGKTCYHFIHVEDLESLRQSHE
DLLRKGQVVTNYYRWLQRRGGYLWVQSCATVSINHKAPHERNIIWVNYVISRTEMPDVAL
DLLQLPEGLRAERLERASSSPHTISPKASGAGVSLAVKGSKLEPELKHREVYSHPPASQS
EDRRKRARRQSSSPDGAPPGARRRVQEFRPREESPAASSEPGSESDAEDEEDEEEEEERG
NAWGGHHEGGRGKKRKSEDQGAAMKTTAGVGGNRIHNGRAVIRQLRGAAPLPSSPGGIKT
ERDSSSSSSSISSGGSVGAGGPGSTGGRWSTHTQPSSHTPTPGSLAEDRSPPAPATDPAD
APPKSLYPPPPPSVSPPGLSPPSRDDRGVLGSHGVGGGSCGGGGGRVADFELLQRLTAAA
TGGGASGRVLFHPLALGPQGPQSLYAPSTIRYAPPELPPSHPPSSSAASQSLRSDHHPAK
PPHHPSHHPHPHHAAAFFPHFQRIAALPPFSGFSASEAAFSAGLPFCMNGLRGATGPEED
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atggccaccatgcccttcgtcagcgagggcaagtgtgtgagcgtggagtgggacttcctg
cagggcctgctggccaaacctcccacgctgccctgcctgcaaaacctgcggaaggagaag
tctcgtaacgcagcacgctctcgccgggggaaggagaacttcgagttcttcgagctggcc
aagatgcttccgttgccgggggccatcaccagccagctggacaaggcgtcggtgatccgg
ctgaccatcagctacctccacatgaggcacttcgccaaccaaggggacccgccctggatc
cccctcatggagggagagaaccactgcgccaaagtgcggcggacaatcaactctctggct
atggacatatttgagctgcaccacggcgcccacctgttacagtccctggatggcttcgtg
tttgtggtgagccaggaggggagattcctgtacatctcagagaccgtgtccatatacctg
ggtctgtcgcaggtggagttgacaggcagtagtgtgtttgactacatccaccctgctgac
cacgtggagatggcggagcggctgggcattaagccacacctacgggcggaggctgggtgc
cacatgaccaatgagagtgcttccagctcagcctccacaccctcattggctgggaccccc
gaaccagccccctccagtccattcacccctgccgatgagctccgggatcgaggctttttc
atccgcatgaagtccaccctcaccaagcgcggccttcacatcaagtcctctggctacaag
gtgatccacgtgacgggtcggattcgctgtcgcccggcgctggtgcacggatcgggccgc
tcgctataccggccgctgggattggtggcgctggcccacacactccccccctccaccctc
aacgaggtgcgcatggaggcccagatgttcgtcttccgcgtcaacatggacctgcaggtc
acctactgtgagaacaggatcactgagtacatggacctgagcccagctgaagtggtggga
aaaacctgctaccatttcatccacgtggaggacctggagagcctcaggcagagccacgaa
gacttgctgcgtaagggccaggtggtgacgaattactaccgctggctgcagaggagaggg
ggctacctgtgggttcagtcgtgtgccaccgtctccatcaaccacaaggccccccacgag
cgcaacatcatctgggttaactacgtcatcagtcgcactgagatgcctgacgtggcgctg
gatttactacaactcccagaaggcctcagggcagaacgactggagcgtgccagctcctcc
cctcataccatctccccaaaggcttcaggtgctggtgtctctctggctgtgaagggcagc
aaactcgagcctgagctgaaacacagggaagtctactcccacccgcccgctagccaatca
gaggacaggagaaaaagagcccggcggcagagctcctcccccgacggcgcccctcccgga
gcgcggaggcgcgtgcaggagttccgcccgcgcgaggagagcccagcagcctcctccgaa
cccgggagcgagagcgacgccgaggacgaagaggacgaggaagaggaggaggagagaggg
aacgcctggggaggacaccacgagggagggagggggaagaagaggaagagcgaggaccag
ggggccgcgatgaagacgacagcaggggtcgggggtaatagaatccataacgggcgcgcg
gtcatcaggcagctgaggggtgccgcccccttacccagctcccccggggggataaagaca
gagagggactccagcagcagcagcagcagcatcagcagcggtggcagcgtaggtgcaggt
gggccggggtccacaggggggcgctggtcgacacacacgcagccctcctcacacaccccc
accccgggcagcctcgccgaggaccgcagcccccccgccccggcaaccgaccccgccgac
gcccctcccaagtccctctaccccccgcccccgccctctgtgtcgcccccgggcctctct
ccaccgtcccgtgatgaccggggggtgctggggtcccacggcgtgggtggaggctcttgt
ggcggcggtggaggtcgtgtggcagacttcgagctgcttcagagactgacggcggcggcc
acgggcgggggggcctccgggcgcgtgctcttccaccctctggccctcggcccccagggg
ccccagagcctctacgcccccagcaccatccgctacgcgccccccgagctgccaccctcc
caccccccctcttcctccgccgcctcgcagagcctgcgctcggaccaccaccccgccaag
ccgccccaccacccgtcccaccaccctcacccccaccacgcggccgccttctttccccac
ttccagaggatcgcggcgctgccccccttcagcgggttctcggccagcgaggcggccttc
tccgccggcctgcccttctgcatgaacggcctcaggggagccacaggaccagaggaggac
tga
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