Clupea harengus (Atlantic herring): 105901578
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Entry
105901578 CDS
T09045
Symbol
hdgfl2
Name
(RefSeq) hepatoma-derived growth factor-related protein 2 isoform X1
KO
K25065
hepatoma-derived growth factor-related protein 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105901578 (hdgfl2)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
105901578 (hdgfl2)
BRITE hierarchy
SSDB
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Paralog
Gene cluster
GFIT
Motif
Pfam:
LEDGF
PWWP
Motif
Other DBs
NCBI-GeneID:
105901578
NCBI-ProteinID:
XP_031430750
Ensembl:
ENSCHAG00000005979
UniProt:
A0A6P8G624
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Position
10:190207..212141
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AA seq
661 aa
AA seq
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MPHNFRPGDLVFAKMKGYPHWPARIEDVADGAVKPPPNKIPIFFFGTHETAFLAPKDLFA
FEKYGERFGKPNKRKGFNEGLWEIQNNPHASYSTPATLMMNQMPASSSDTEDNDAGAKSE
PEEEEEEEEKAAVVPWRTETGSEDSDSGSEDQGKAGVKRKIPAPKQPSAKKKKARGSSSE
KDKQHGKGTTSESEPSPTSDSDSGKSSDQDFTPEKKSTGRGGRKATARGKKTKPSTDSDS
DSGSQSEQKGGRSDSDDSKPRPAISGSESQSGSKSESDSDTPARKRPPPAKKEKVAPKAP
VRKQKAVPEKASSSSDSDSDSETDHISDWKKRDEERRHELEERRKKEEAEELRRLRDREK
EEDKEDKERKRDKEKGGKKDSSSSSDEGVDDFPLKKSKKPPPPPRPAPSDSDSPAPSEPK
KKIKRSDNQKKERWKKEKDDEKKETHRKKKTQPAVDKPKSRQDKAKHKPKPKPEKKPEKK
KELSPEEKLQKLHQDIKFALKVDNPDIKRCLEALAELESVQVTSAILQKNSDVIATLKKI
RRYKASGAVMEKASEVYNKLKLQFLGKSDPTAKNPLENQNPDDGGTEPQLQDLKPVNGES
ESPEKNIECHPESPPAEESPEPKLVISSRAESEDLPEKHVPSDVTKHSPTPNAQTAVEEE
S
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacaatttccggcctggcgacctagttttcgccaaaatgaaggggtacccccac
tggcctgcccggattgaggatgtggctgatggagccgtaaaacctccaccaaacaagatc
ccaatcttcttcttcgggactcatgaaacagccttcctggcaccaaaggacctgtttgca
tttgagaagtacggtgagcgttttggtaagcctaacaaacggaaaggcttcaatgaggga
ctgtgggagatccagaacaatcctcatgcctcctacagcacacctgctactttgatgatg
aatcagatgcctgcaagctcatcggacacggaagacaatgatgccggggcgaagagtgag
cctgaggaggaggaagaggaggaggagaaggcagcggttgtgccgtggcgtactgagact
ggcagtgaagattccgactcgggcagtgaggatcaaggaaaagcaggagtgaagcggaag
atacctgcgcctaagcaaccttcagcaaagaagaagaaggcccgaggttcatccagtgag
aaagacaaacagcatggcaaggggaccacatcagagtctgagccgtccccaacatcagac
tctgattcagggaaaagtagtgaccaggacttcacaccagagaagaagtcaactggcaga
ggggggagaaaggccacagcaagaggaaagaagacgaagccttcaacagactccgattct
gattcaggatcacagtctgagcagaaaggaggtagatctgactcggatgactctaaaccc
cggcctgccatctctggctcggagtcccagagtggttccaaatctgagtctgattctgat
acccctgctcgtaaacgtcccccgcctgccaagaaagaaaaagtggcccccaaagcaccg
gtcaggaaacagaaggccgtcccagagaaggcttcatcctcctcggacagtgacagtgac
agtgaaacagaccacatcagtgactggaagaaacgagatgaggagcgtcggcatgaactg
gaggagcggaggaagaaggaggaggcggaggagctgaggagattgagagacagggagaag
gaggaggataaggaggataaggagaggaaacgggacaaagaaaagggcgggaaaaaggac
tctagcagcagctcggatgagggagtagacgactttccccttaagaagagtaagaagccc
cccccacccccacgccctgctccgtccgactctgactcacccgcacccagtgagcccaaa
aaaaaaatcaaacgctcagacaaccagaagaaagagcgatggaagaaggaaaaagacgac
gagaagaaagaaacacacaggaagaagaaaacgcagcccgcagtggacaaaccaaagagt
aggcaggacaaagcaaagcataaaccaaaaccaaaaccagagaaaaaacccgaaaagaag
aaagagctatcccctgaggagaagctgcagaagctccaccaggacatcaaattcgcactt
aaagtcgacaaccctgacatcaaacgttgtctggaagcactggcagaacttgaatcggtc
caagtcacaagtgccatactacagaagaactctgatgtcatcgctacacttaagaagatt
cgtcggtacaaagccagtggtgctgtaatggagaaagccagtgaagtatacaacaaattg
aaactgcagttcctagggaagtctgacccaactgccaaaaacccactggagaaccagaac
ccggatgatggtggaacagagccccaacttcaagatctaaaaccagtgaatggggagtca
gaatctccggaaaaaaacatagaatgtcaccctgaatctccacctgctgaagaaagcccc
gagcccaagcttgtcatttccagcagagcggaatcagaagatttgcctgagaaacatgtt
ccctctgatgtcaccaaacatagtcctactcctaatgcacagactgctgtagaagaagag
agctga
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