Clupea harengus (Atlantic herring): 105901579
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Entry
105901579 CDS
T09045
Symbol
ap3d1
Name
(RefSeq) AP-3 complex subunit delta-1 isoform X1
KO
K12396
AP-3 complex subunit delta
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
105901579 (ap3d1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105901579 (ap3d1)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Others
AP-3 complex
105901579 (ap3d1)
Endosome - Golgi transport
105901579 (ap3d1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adaptin_N
AP3D1
Cnd1
HEAT
HEAT_2
INTS1_R4
RasGEF_N_2
TPR_Trm732_C
CEP104-like_TOG
Vac14_Fab1_bd
FANCI_S3
Motif
Other DBs
NCBI-GeneID:
105901579
NCBI-ProteinID:
XP_031430752
Ensembl:
ENSCHAG00000006044
UniProt:
A0A6P8G557
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All DBs
Position
10:216679..258838
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AA seq
1244 aa
AA seq
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MALKIVKGSIDRMFDKNLQDLVRGIRNHKEDEAKYISICIDEIKSELKQDNIAVKANAVC
KLTYLQMLGYDVSWAAFNIVEVMSSSKFTFKRIGYLAASQCFHEGTDVIMLTTNQIRKDL
SSPNQYDTGVALTGLSCFVTPDLARDLANDIMTLMSHTKPYIRKKAVLIMYKVFLKYPES
LRPAFPRLKEKLEDPDPGVQSAAVNVICELARRNPKNYLSLAPLFFKLMTSSTNNWVLIK
IIKLFGALTPLEPRLGKKLIEPLTNLIHSTSAMSLLYECVNTVIAVLISLSSGMPNHSAS
IQLCVQKLRILIEDSDQNCEPSVNACMKYLGLLAMSKILKTHPKSVQSHKDLILQCLDDK
DESIRLRALDLLYGMVSKKNLMEIVKKLMLHVDKAEGTTYRDELLTKIIDICSQSNYQYI
TNFEWYISILVELTRLEGTRHGHLIASQMLDVAIRVKAIRGFAVAQMATLLDNAHLLTGN
TQRNGICEVLYAAAWICGEFSEHLEDPKQTLEAMLRPKVATLPGHIQAVYVQNAAKLFAT
VLRSQESAPEAAQETSQLMIERLPLFVQSANLEVQERASCILQLVKYIQKLQQKDVEVAE
EVTALFAGELNPVAPKAQKKVPIPEGLDLDAWINEPPSESESEDEKPKAVFAREEPKHTR
SRHTEVDEKELAKRREARKQEQANNPFYIKASPSSQKVYQDAPGVEHIPVVQIDLSVPLK
VPGLPLSDQYVKMEEERRQKDKDDKKKKEKKRKREKRGRGRQVDSGPESEEDITPAQQVD
IMTEEMPENALPSDDDDKDPNDPHKALDIDLDKPLADSEQLPTRTHRSAEVLKSPGGDGD
GETITPEPKKKTRKDKKEKKKVKDKERTRSAEDKKNKKKHKHDPEEEEAKIEEAITLVNA
EEAQPTAAADLDFWLTTDAAPSSAQEAVAATIPEVPIEAEPSEVKEVEPEEMKSKHKKKK
PKKEKEEMEREKKKKKKRHHHHRSERAETESVQNGTMEEEEEEEEPLPPMSNYGLLAEND
YIKMVYDIQGNLQDGSQVVVSIIFQNKTSSVLKSMEFNVLDSLNSKLERPEGASPHDALS
VPFQLPPEVSNEARFVFAVQSIVMPQKLKGTLTFIVKTDDSSTHEKLDFKLHFTCTSYLI
TTPCYSDAYAKLLESGDLKSSSLKLEGVTMPFHHSLARICFHHHFSVVERVDSCASMYSR
SIQGHHVCLLVKTADETVSIDAKCDELMLLENVLDEIKQTFSQS
NT seq
3735 nt
NT seq
+upstream
nt +downstream
nt
atggctttgaagattgttaaagggagcatcgatcggatgtttgacaaaaacctccaggat
ctagtgcgtggcattagaaaccataaggaggatgaggctaaatacatctccatttgtatc
gacgagatcaaatcggagctgaagcaggacaacattgcagtgaaggccaatgctgtctgc
aaactgacctacttacagatgttagggtatgacgtcagctgggcagcctttaatatcgtg
gaggtgatgagctcctcgaaattcacatttaagaggatcggttacctggcagcctcgcag
tgttttcatgagggcactgatgtcatcatgttgacaaccaatcagatccgtaaggatctc
agtagccctaatcagtatgacactggtgttgccctgactggcttgtcctgctttgtgacc
ccagatctggctcgtgacttggcaaatgacatcatgaccttaatgtcccacactaagcct
tacatccggaagaaagctgtgctgatcatgtacaaggtgttcttgaagtaccctgagtct
ttgcgtccggcgttccccagactcaaagagaagctggaggaccctgaccctggggtccag
tcagcagcagtgaacgtcatctgtgagctggccagaagaaaccccaagaattacttgtct
ctggctcccctcttcttcaagctgatgacctcctccactaacaactgggtcctgattaaa
atcattaaactgttcggtgccctcacaccactggagccacggctggggaagaagctgatt
gagccactcaccaacctcattcacagcacttctgccatgtcgcttttatatgaatgtgtg
aacactgttattgcagttttgatatccctgtcctcgggaatgcccaaccacagtgctagt
attcagctctgtgtgcagaagctgcgaatcctgatcgaagactcggaccagaactgtgag
ccctctgtcaatgcctgcatgaaatatctaggtctgctggcgatgtccaagatcctgaaa
actcaccccaaatctgtacagtcccacaaagacctcatcctgcagtgtctcgatgacaaa
gacgagtccattcgcctcagggcgctcgacctgctctacgggatggtgtcgaagaagaac
ctaatggagattgtgaagaagcttatgctccatgtggacaaggctgaaggcacaacctac
agagatgagctgctcacaaagatcattgatatatgcagccagagcaactaccaatacatc
accaactttgagtggtacatcagcatcttggtggagctgacgaggcttgaaggcactcgg
cacgggcaccttatcgcctcgcaaatgctggatgtggctattcgggttaaagccatccga
ggcttcgctgtggcccagatggccaccctcctggacaacgcgcacctactgacggggaac
acccagcgcaacgggatctgtgaggtgttgtatgctgccgcctggatctgtggcgagttt
tcagaacatctggaagaccccaaacagactctggaggcgatgctccggcccaaggtggcc
acgctgcccgggcacatccaggctgtgtacgtccagaatgcagccaagctgttcgccacg
gtcctgaggagccaagagagtgccccagaggcagcgcaggagaccagccagctgatgatc
gagaggctgccactgtttgtgcagagtgcaaacctggaagtacaggagagggcctcctgc
atcctgcagctggtcaagtacatccagaaactgcagcagaaggacgttgaagttgctgag
gaggtgacggctttatttgctggcgagctcaacccagtggccccaaaagctcagaagaaa
gtgcctattcctgaaggcctggacctggacgcctggatcaatgagcctccttcagagagt
gagtctgaagacgagaagcccaaggctgtctttgccagggaggagcccaagcacacccga
tcacgccacactgaagtggacgagaaggagctggccaagcggcgagaagccaggaaacag
gagcaggccaataatcctttctatatcaaagcctcaccatcctcacagaaggtgtatcag
gacgccccaggagtggagcacattccagtggtccagatcgacctcagtgtgcctctcaaa
gttccagggctgcccttatcagaccagtacgtgaagatggaagaggagcgtcggcagaag
gataaggacgacaagaagaaaaaagagaaaaaaagaaagagggagaagcgtggccggggg
agacaggtggactcaggccctgagagcgaggaggacatcaccccggcccagcaggtggac
atcatgacggaggagatgccagagaatgccttacccagtgatgacgatgacaaagatccc
aatgatccccacaaagccctggatatagacctggacaagcctctggctgatagtgagcag
ctccctaccagaacacatcgctctgctgaagtcctgaagagtccaggaggggatggagat
ggagagaccatcacacccgaacccaagaagaaaactaggaaggacaagaaagaaaagaag
aaagttaaggacaaggagagaacgaggtctgcagaagataagaagaacaaaaagaaacac
aagcatgatcctgaggaagaggaggctaagattgaagaagcgatcacattggtgaatgct
gaagaggcgcagcctactgcggcagcggatttggatttctggctcacaactgatgcagct
ccctctagtgcacaggaggctgttgcagcaaccatccctgaggtgccgatcgaggcggag
cctagtgaggtcaaagaggtggagccagaagagatgaaatccaaacataagaagaaaaag
ccgaaaaaagagaaagaagagatggagagggagaaaaagaagaagaaaaagagacaccac
caccaccggagtgagagagcggagacggagtcggttcagaacggcaccatggaagaggag
gaggaggaggaagaacccctgccgccgatgtcaaattacggcttgcttgctgagaacgac
tacattaagatggtgtatgacatccaaggcaatctgcaggacggcagtcaggtggtggtg
tcaatcatcttccaaaacaagaccagcagcgtcctcaaatcaatggagttcaatgtgttg
gattctctcaactctaagctggagagaccagagggtgcatctccacacgatgctctgtct
gtcccatttcagctcccaccagaggtttcaaacgaggcccgcttcgttttcgctgtccaa
agcatagtcatgcctcagaaactgaagggaaccctcacctttatagtgaagaccgatgac
tcctccactcatgagaaactggacttcaaactgcactttacctgcacatcatacctaatc
accacaccctgctacagtgatgcgtatgctaaactgctggagtccggtgacctgaagagc
agctctctgaagctggagggcgtgaccatgcccttccaccactctctggcccgcatctgc
tttcatcaccacttctctgttgtggagagggtcgattcctgtgcttccatgtacagcagg
tccattcagggtcaccatgtctgtttgctggttaaaacggctgatgagacggtgtcaatc
gatgccaagtgtgatgagctgatgttgctggagaatgtgttggatgagatcaagcagacc
ttctcccagagctga
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