Clupea harengus (Atlantic herring): 105901594
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Entry
105901594 CDS
T09045
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
char04210
Apoptosis
char04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
105901594 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
105901594 (parp1)
04217 Necroptosis
105901594 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
105901594 (parp1)
03036 Chromosome and associated proteins [BR:
char03036
]
105901594 (parp1)
03400 DNA repair and recombination proteins [BR:
char03400
]
105901594 (parp1)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
105901594 (parp1)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
105901594 (parp1)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
105901594 (parp1)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
105901594 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
105901594
NCBI-ProteinID:
XP_031438074
Ensembl:
ENSCHAG00000008512
UniProt:
A0A6P8GFZ4
LinkDB
All DBs
Position
15:complement(27499317..27529894)
Genome browser
AA seq
1024 aa
AA seq
DB search
MADSQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWQ
RAAAQAPGDISGFSDLRWEDQEKVKKAIETGGATGGKGDQKGAAKGEKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQMRVSKKTVDPEKPQLGLIDRWYHTGCFVSRRQELAFKPEYSAAQ
LKGFAILKADDKEELKKRLPAVKSEGKRKGDEPDGEGAPKKMKKEAEEKMKKEAEEEKKL
ETQLKDQSQLIWGIKDKLKKYCSTNDMKELLIANGQDVPSGESNIVDSLADCMAYGALKP
CETCQGQLVFKSDAYYCNGDISAWTKCVFKTRTPDRKDWATPKEFHEVPFLKKFKFKRQD
RLYPKEAPPSPPAPTASEGGPGASSLPSEALPEAPPADKPLTGLRLLAVGKLSKNKDDLK
VAVEDLGGKITGTASKAKLCISTRKEVEKMSKKMEEVKEAGVRVVSEDFLTDIKSSGKAL
QELVSLHGISPWGAEVKLEPQAPSAASKSTGTPAAKSAGKVKEEEGGSKSKTMKLTVKGG
AAVDPDSGLENCAHVLDQSGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWG
RVGTTIGGNKLDKFYDKNSAMDNFRNVYEEKTGNSWTSTNFTKYPNKFYPLEIDYGQDEE
AVKRLTESAGTKSKLAKPVQELIRMIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQNAY
TLLSEVQQAVGDSATESTILDLSNRFYTLIPHDFGMKKPPLLSSLDYIQAKVQMLDNLLD
IEVAYSLLRGGADDDKKDPIDINYEKLKTTIEVVDKSSHEAELIHQYVKNTHAATHNTYS
LEVEEVFKIVREGEYQRFRPFEELHNRQLLWHGSRATNYAGILSQGLRIAPPEAPVTGYM
FGKGVYFADMVSKSANYCHTSQADPTGLLLLGEVALGNMHELKKASHITKLPKGKHSVKG
VGRTAPDPTATVKLDGVDVPLGKGSTTNIEDTSLLYNEYIVYDVAQVNLKYLLKIRFNYQ
TSLW
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcacaggacgacaagctgtataaagctgaatatgcgaagagtgggcgcgca
tcttgcaagaaatgcaaagaaaacattgcgaaggattcactgcggatggccatcatggtg
cagtcgcccatgttcgatgggaaggtgccccactggcaccacttctcctgcttctggcag
cgggcagcggcacaggcccccggcgacatctccggcttcagcgacctgcgctgggaggac
caggagaaggtcaagaaggccatcgagaccggaggagccacaggagggaaaggagaccag
aagggggcagccaagggagagaagaccctaaacgacttcgctgtggagtacgctaagtcc
aacaggagcacctgcaaaggctgcgaacagaagattgaaaaggaccagatgcgcgtgtcg
aagaagacggtggacccggagaagccgcagctgggcctgatcgaccgctggtaccacacg
ggctgcttcgtgagccggcgccaggagctggcctttaagcccgagtacagcgccgcccag
ctcaagggcttcgccatcctcaaggctgacgacaaggaggagctcaagaagaggctgccc
gccgtcaagagcgaggggaagaggaaaggggacgagccggacggagagggagcgcctaag
aagatgaaaaaagaggcggaggagaagatgaagaaggaggcggaggaggagaagaagctg
gagacgcagctgaaggatcaatctcagctgatctggggcattaaggacaagctgaagaag
tactgctccaccaacgacatgaaggagctgctcatcgccaacggacaggacgtgccctca
ggagagtccaatatcgtggacagcctggcagactgcatggcgtacggcgccctgaagccg
tgtgagacgtgccagggccagctggtgttcaaaagcgacgcctactactgcaacggagac
atctccgcctggaccaagtgtgtgttcaagacccgcacgcccgacaggaaggactgggcc
acgcccaaggagtttcacgaggtgcccttcctgaagaagttcaagtttaagaggcaggac
cgcctctaccccaaagaggccccgccctccccccccgcccccaccgcctccgagggcgga
cccggagcctccagcctcccctccgaggccctgccagaggcgccccctgcagataagcct
ctgactggcttgaggctgctggccgtggggaagctgtctaagaacaaagatgacctgaag
gtggccgtggaggacctgggagggaagatcactggaactgcatccaaggccaaactctgc
atcagcacacggaaggaggtggagaagatgagcaagaagatggaggaggtaaaagaggcc
ggtgtgcgtgtggtgtctgaggacttcctgacggacatcaagtcctcgggcaaggccctc
caggagctcgtctccctgcacggcatctccccctggggggccgaggtcaaactcgagccc
caggctccatctgcggcctccaagtccaccggaacccccgctgccaagagcgcaggcaaa
gtgaaggaggaggaagggggcagtaagtccaagaccatgaagctgacagtgaagggcggt
gcggctgtggaccccgactctggtctggagaactgcgcccatgtgctggatcagagcgga
aagatctacagcgccacccttggcctggtggacatagtgcggggcaccaactcctactat
aagctgcagctgctggaggatgacgtgcagaagaggtactgggtgttcaggtcatggggg
cgagttggcaccactatcggagggaataagctggacaagttctacgacaagaactcggcc
atggacaacttccgcaacgtctacgaggagaagacgggcaactcctggacctcgaccaac
ttcaccaaataccccaacaagttctacccgctggagatcgactacggccaggacgaggag
gcggtgaagaggctgacggagagcgctggcaccaagtccaagctggccaagcccgtgcag
gagctgatccgcatgatctttgatgtggagagcatgaagaaggccatggtggagtttgag
atcgacctgcagaagatgccgttggggaaactgagtaagaggcagatccagaacgcctac
actcttctcagcgaagttcaacaggcggtgggggacagtgccacagaatccaccattttg
gatctgtccaatcgcttctacacgctcatcccccacgactttgggatgaagaagcctccg
ctactgagcagcctcgactacattcaggctaaggtgcagatgttggacaacctcctggac
attgaggtggcctacagcctgctccgcgggggggcagacgacgacaaaaaggatcccatc
gacatcaactatgagaaactcaaaactacgattgaggtggttgataagtcttcacatgaa
gccgagctcatccatcaatacgtgaagaacacacacgctgccactcacaacacctattcg
ctggaggtggaagaggtctttaagatcgtgcgggagggcgagtaccagcgcttccgtcct
ttcgaggagctgcacaatcggcagctgctgtggcacggctctcgcgccaccaactacgcc
ggcatcctgtctcaaggtctacgcatcgccccaccggaggcgccagtaacgggttatatg
tttggtaaaggtgtgtacttcgctgacatggtgtccaagagtgccaactactgccacacc
tcccaggccgaccccactggcctcctcctcctgggcgaggttgccctcggcaacatgcat
gagctgaagaaagcatcacacatcacaaagttacctaagggcaaacacagtgttaaaggt
gtgggccgaaccgccccggaccccaccgccacggtgaagctggatggagtcgatgtgcct
ttggggaagggatcgaccactaacatagaggacaccagtctgctgtacaacgaatacatc
gtgtacgacgtcgctcaggtgaacctgaagtacctgctgaagatccgtttcaactaccag
acatccctgtggtga
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