Clupea harengus (Atlantic herring): 105901681
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Entry
105901681 CDS
T09045
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
char03009
]
105901681 (nop2)
Enzymes [BR:
char01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
105901681 (nop2)
Ribosome biogenesis [BR:
char03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
105901681 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
PCMT
FtsJ
BMT5-like
Motif
Other DBs
NCBI-GeneID:
105901681
NCBI-ProteinID:
XP_012684621
Ensembl:
ENSCHAG00000021833
UniProt:
A0A6P3W092
LinkDB
All DBs
Position
11:9629984..9636573
Genome browser
AA seq
784 aa
AA seq
DB search
MGRKLDPTNQVKRGPGRKTRKQKGAETELSKFITDEDESKRLSSRGRKRAAKRAQTAKEP
KTAKEPKTAITEKKPKKGFTDANSKWLTPAKLKRKIDQVEDEDDSESEWELEEDEEDKGK
KKVEGGDEDNEDGSGDGENDDDDDDDDLVDDYGAESGEEEDGEELLPIEKAARKQKALKE
ALEQESDDEEDDDDDDDDDDDEDEVDEQKEGEMEGDDALQINMDEMDKFILPGAEERQKE
GILPLDLQTIHQRIKDNVDVLTHFAEKREEGKERSEYLTLLKSDLCIYYSYNDYLMGKLM
DLFPLSELVDFLEANEIHRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIF
DSSVPIGATPEYLAGHYMLQGASSLLPVMALSPQEGESILDMSAAPGGKTTYMAQLMKNT
GIIVANDANAGRLKSVVGNMHRLGVTNAIICNYDGRQFPKVMGGFDRVLLDAPCAGTGVI
SKDPSVKTNKDDADILRSAHLQKELLLSAIDSVNAESQTGGYLVYCTCSITVEENEWVVD
YALKKRHVRLVKTGLDFGKEGFTRFKERRFHQSLNLTRRFYPHLHNMDGFFVAKFKKISN
TIPTATTEEEAEPAEEEVSVPAEEGSAGEDDKEKPSKPQKGKPKSVKPSAKPQKPPQSKG
QPGKANGKANVKANGKANGVAAKPADGKKLGSLKKKDNASGPKKAKIAKVDREVVKKGDE
VTKEKVNQEGGVTKSEPGVEKKDGSRFEKKSMKKKHKNPVKKNRIGKNKFKKLKKLITQE
DTML
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaaattggaccccactaatcaggttaagcgaggaccaggacgcaagaccagg
aaacagaagggagcagagaccgagctgtccaagtttataacagacgaggatgaatctaaa
aggttgtctagccgaggcagaaaacgagctgcaaaaagagctcagactgccaaagaaccc
aagactgccaaagaacccaagactgccattaccgaaaagaagcctaaaaaaggtttcacg
gatgcgaacagtaagtggctgacaccagccaagcttaaacgcaaaattgaccaggtggag
gatgaagacgacagtgaaagtgaatgggaactagaagaggatgaggaggacaaaggaaag
aaaaaggtagaaggtggtgatgaagacaatgaagatggcagtggtgatggtgaaaatgac
gacgacgatgatgatgatgatctggtggatgattacggggcagaaagtggtgaagaggaa
gatggggaggagctgcttcctattgagaaagctgctcgtaaacaaaaggcattgaaagaa
gctttagagcaggagagtgatgatgaagaagacgacgatgatgatgatgatgacgacgat
gatgaagatgaggttgatgaacaaaaagaaggcgagatggaaggcgatgacgcattacag
atcaacatggatgagatggacaaatttatactacctggagcagaggaaagacagaaagaa
ggaatccttcctttagacctgcagaccatacaccagaggataaaggataatgtcgacgtt
ctcacccactttgccgaaaagagggaggaggggaaggagaggtcagaatacctcaccctg
ctgaagtccgacctctgcatatactacagctataatgactaccttatgggcaaactcatg
gacctcttccccttgtctgaactggttgacttcctcgaggccaacgaaatccatcgacct
gtcaccattagaaccaacacactgaagacgaggagaagggacttggctcaggctctcatc
aacagaggggtgaatctggacccactgggaaaatggtcaaaagtgggcttggtcattttc
gactcctctgtccccattggtgcaactcctgagtacctggcagggcattacatgcttcag
ggagcgtcctctctcctacctgtcatggcactctctccccaggagggggagtctatcctc
gacatgagtgctgctcctggaggcaaaaccacatatatggcccagctaatgaaaaacaca
ggaatcatcgtggctaatgatgcgaatgcaggccgattgaagagtgtggtgggaaacatg
caccggctgggcgtcacaaacgccatcatctgcaattacgatggcaggcagttccctaag
gtaatgggaggatttgacagggtgttgctggacgccccgtgtgctggtactggggtcatc
tccaaagacccttcagtgaagaccaataaggacgatgcagacatcctgcgctctgcgcat
ctgcagaaggagctcctcctgtctgccatcgactctgtgaacgcagaatctcagacgggc
ggttacctggtctactgcacctgctccatcacggtggaggagaatgagtgggtggtggac
tacgctctgaagaagagacacgtgagactggtaaagaccggcctggacttcggcaaagaa
ggtttcaccagatttaaagagcgacgcttccaccagtcattgaacctcacacggcgcttt
taccctcacctgcacaacatggatggcttcttcgtggccaagttcaagaagatctccaac
accattccaactgccactacagaggaagaggctgagcctgctgaggaggaggtgtctgtg
ccagctgaggagggctctgcaggggaagacgacaaagagaagcccagcaaacctcaaaag
gggaagcccaagtcagtcaagccgtcagccaagcctcagaaacccccacaaagtaaaggc
caaccaggcaaagctaatggcaaagctaatgtcaaggctaacggcaaagctaacggcgtg
gcagcgaaaccagctgatggaaagaaactgggctctctgaagaagaaagacaacgcgagt
ggacccaaaaaagctaaaatagccaaggtcgacagagaggttgtgaagaaaggtgacgag
gtcacaaaggagaaggttaaccaggagggtggcgtgaccaagagcgagccaggggttgag
aaaaaagatggcagcagatttgaaaagaagagcatgaaaaagaagcataaaaatcccgta
aagaagaacagaatagggaaaaataaatttaagaagctgaagaaactgatcactcaagag
gataccatgctgtaa
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