Clupea harengus (Atlantic herring): 105901699
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Entry
105901699 CDS
T09045
Symbol
gabpb2b
Name
(RefSeq) GA-binding protein subunit beta-2b isoform X3
KO
K09454
GA-binding protein transcription factor, beta
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105901699 (gabpb2b)
03029 Mitochondrial biogenesis [BR:
char03029
]
105901699 (gabpb2b)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
105901699 (gabpb2b)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
105901699 (gabpb2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank
Ank_2
Ank_3
Ank_4
Ank_5
Motif
Other DBs
NCBI-GeneID:
105901699
NCBI-ProteinID:
XP_012684643
Ensembl:
ENSCHAG00000008795
UniProt:
A0A6P3VYP9
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Position
11:complement(10592972..10597039)
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AA seq
433 aa
AA seq
DB search
MSLVDLGKRLLEAARKGQDDDVRTLMANGAPFTTDWLGTSPLHLAAQYGHFSTAEVLLRA
GVSRDARTKVDRTPLHMAAAEGHTSIVELLVKSGADVNAKDMLKMTALHWATEHGHRAVA
ELLVKYSADTHSMSKFDKTPFHIAVDKGNTELMLLLQDGMQNQVNMNPLSSSTTSIPSPQ
FVISSSGEVMNLSDLVLTAAKSNLVGATEEVIAANSVDSALQQVMGEGGQRVITIVTDQQ
GNLQPASLGQKFYVTMQGQQMVAVPAGQITEEVVVEESKPPTPRKRKLEQVTTHAEPKQK
QDKAEKGSREQLQRQLKEANQRAQEYRTQLLQKEQETEHYRLQLEAMTNGQTNGTNATAD
GQEEEEVVLQEEEEEVEEEVEVEQEAEEEVVMLSEGTIIIKPGELDTDVVECEQVTLVDA
AESAAVLQTPVST
NT seq
1302 nt
NT seq
+upstream
nt +downstream
nt
atgtctcttgtggatttggggaagagattacttgaggcggcacgaaaggggcaagatgat
gatgtcaggactctcatggccaatggagctccttttaccacagactggcttgggacgtcg
cctcttcatctggccgcacagtatggacacttctctactgcagaggtactcctccgtgca
ggcgtcagccgggacgcccgcaccaaggtggacaggacccctctccacatggccgctgca
gaggggcacaccagcatcgtggaactactcgtcaagagcggagcggatgtcaacgctaaa
gacatgctgaagatgactgcgctgcactgggccactgagcacggccacagagccgtggcg
gagctgctggtgaagtacagcgccgacacgcactccatgagcaagtttgacaagacgccc
ttccacatcgccgtggacaagggcaacactgagctcatgctactcttgcaggacggcatg
cagaaccaggtgaacatgaaccctctcagcagctccaccacctccatccccagtcctcag
ttcgtcatctcctcctccggggaggtcatgaacctgtctgatcttgtcctcacagctgcc
aagtctaacttggtaggtgctactgaagaagtgattgctgcaaactcggtggattctgcc
ctccagcaggttatgggcgaaggagggcagagggtcatcaccatagtgacagaccaacag
ggcaacctgcagccagcttctttggggcagaagttctatgtcaccatgcaggggcaacaa
atggtggctgttccagccggacagatcacagaggaagttgtggtggaggagtccaagcct
cccactcctcgcaagaggaaactggaacaagtgaccacccacgcggagcccaaacagaag
caggacaaggctgagaagggtagccgggagcagctgcagaggcagctgaaggaggccaac
caacgggcgcaggagtaccggacgcagctcctgcagaaggagcaggagaccgagcactac
cgcctacagctggaggccatgaccaacgggcagactaacggcaccaacgccaccgcagac
ggccaggaggaggaggaggtggtgctgcaggaggaggaggaggaggtggaggaggaggta
gaggtggagcaggaggctgaggaggaggtggtgatgctttccgagggcaccatcatcatc
aagcccggcgagctggacacagacgtggtagagtgtgagcaggtgacgctggtcgatgcg
gcggagagcgcggctgtgctgcagacaccggtgtcgacgtaa
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