Clupea harengus (Atlantic herring): 105901729
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Entry
105901729 CDS
T09045
Symbol
xylt2
Name
(RefSeq) xylosyltransferase 2
KO
K00771
protein xylosyltransferase [EC:
2.4.2.26
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
char00534
Glycosaminoglycan biosynthesis - heparan sulfate / heparin
char01100
Metabolic pathways
Module
char_M00057
Glycosaminoglycan biosynthesis, linkage tetrasaccharide
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
105901729 (xylt2)
00534 Glycosaminoglycan biosynthesis - heparan sulfate / heparin
105901729 (xylt2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105901729 (xylt2)
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.26 protein xylosyltransferase
105901729 (xylt2)
Glycosyltransferases [BR:
char01003
]
O-Glycan biosynthesis
Glycosaminoglycan
105901729 (xylt2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xylo_C
Branch
Motif
Other DBs
NCBI-GeneID:
105901729
NCBI-ProteinID:
XP_031416576
Ensembl:
ENSCHAG00000003946
UniProt:
A0A6P8EWV9
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Position
23:23483816..23501127
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AA seq
577 aa
AA seq
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MVASSRVQRIFRRYKLAIAAALTILLIQGLVVWSLRSLEEGEAELSRTNDELVAFLSKHR
DKNFLKSHGRENARFIKKQGLDRLFHECDNHMWRLGERGVPEGLEVSGGSDWFALTRHFV
DYVVTSQDALVAGLKQFYTYALLPAESFFHTVLGNSHLCETLVDNNLRVTNWNRKLGCKC
QYKHIVDWCGCSPNDFKPPDLVRIQQLTRPTFFARKFESTVNQEAMDILDTHLYGQYPPG
TRALKAYWESVHEREDGQNTLSDVQLTAYTSFTRLGLHSLQGKGADCKFEPIGFPASVHL
YFYDDRFQGYLVKQEVQTASGGRDTLEVWSVPQAPLQLENNLREFERLKHLEVGTEWDPK
ERIFRNFGGVMGPLDEPVAVQRWARGPNLTATVVWIDPAHVVAASYDVGVEAEAEFTQYR
PPLQRPLRPGVWHVRVLRLWERMAETRFLVTPLAYRTHQPFKTGEHGWLHAGPAGDLYLE
QSFQQLSSVLRLPALEAGLQEARGHAQLQGAELEAWVDGGFSSFWSAGGVCSSSSAAAAA
GSSSCGALGSCTEASWSSMTPDPKAELGPIKSDGRIR
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggtggcaagcagtcgagtacagcggatcttccgacgctacaaactagccattgccgcc
gcactgacaattctcctcatacaaggactcgtagtatggagtcttcgtagtttagaggag
ggcgaggcagagctctccaggactaatgatgagttggtggccttcctgtcgaagcacaga
gacaagaacttcctgaagtctcacggacgtgaaaatgcaaggttcatcaagaagcagggc
ctggaccgcctcttccacgagtgtgataaccacatgtggcgtctcggggagcgaggcgtc
ccagaaggccttgaggtgtcgggaggctccgattggttcgccctgacgcggcactttgtg
gattacgtggtgacctcacaggacgcgctggtcgcggggctcaaacagttctacacatac
gcactcctgcctgcagagtcgttcttccacacagtgctgggtaacagtcacctgtgtgag
actctggtggataataacctgcgcgtcacgaactggaatcggaaactgggctgcaagtgt
cagtacaagcacatcgtggactggtgtgggtgctcccccaacgacttcaagccccctgac
ctcgtcaggatccagcaactgactcggcccaccttcttcgcccgcaagtttgagtcgacg
gtgaaccaggaggcgatggacatcctggacacacacctgtacgggcagtacccgccgggc
acgcgggcgctcaaggcctactgggagagcgtgcacgagcgcgaggacgggcagaacaca
ctctccgacgtgcagctcaccgcgtacacgtccttcacacgcctggggctgcacagcctg
cagggcaaaggggctgactgcaagtttgagcccattggcttccccgcatccgtgcatctg
tatttctatgacgaccgtttccagggttacctggtgaagcaggaagtgcagacggcgtcg
ggtgggcgggacaccctggaggtgtggtctgttccccaggcacccctgcagctggagaac
aacctgagggagtttgagaggctcaagcacctggaggtggggacggagtgggaccctaag
gagagaatcttccggaacttcggcggggtgatgggccccctggacgagccggtcgccgtg
cagcgctgggcgcggggccccaacctgacggccacggtggtgtggatagaccccgcccac
gtggtggcggcctcctacgacgtcggcgtggaggcggaggcggagttcacgcagtaccgg
cccccgctgcagcgccccctcaggccgggagtgtggcacgtgcgcgtcctgcggctgtgg
gagcgcatggcagagacgcgcttcctggtcacgccgctggcctatcgcacgcaccagccc
ttcaagacgggagagcacgggtggctccacgctggtcccgcgggtgacctctacctggag
cagagtttccagcagctcagctccgtgctccgcctccctgccctggaggcggggctgcag
gaggcccggggccacgcccagctgcagggggcggagctagaggcctgggtggacgggggc
ttctcgtcgttctggtccgcgggcggagtgtgttcgtcgtcgtcggcggcggcggcggcg
ggctcctcctcctgcggcgcgctgggctcctgcaccgaggcctcctggagctcgatgacc
cctgaccccaaggcggagctcgggccaatcaagagcgacgggcgcatcaggtag
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