KEGG   Clupea harengus (Atlantic herring): 105901767
Entry
105901767         CDS       T09045                                 
Symbol
kdm3b
Name
(RefSeq) lysine-specific demethylase 3B isoform X1
  KO
K15601  [histone H3]-dimethyl-L-lysine9 demethylase [EC:1.14.11.65]
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:char03036]
    105901767 (kdm3b)
Enzymes [BR:char01000]
 1. Oxidoreductases
  1.14  Acting on paired donors, with incorporation or reduction of molecular oxygen
   1.14.11  With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
    1.14.11.65  [histone H3]-dimethyl-L-lysine9 demethylase
     105901767 (kdm3b)
Chromosome and associated proteins [BR:char03036]
 Eukaryotic type
  Histone modification proteins
   Histone demethylases
    105901767 (kdm3b)
SSDB
Motif
Pfam: PWWP_KDM3B Tudor_KDM3B JmjC DUF7030 Cupin_2
Other DBs
NCBI-GeneID: 105901767
NCBI-ProteinID: XP_031442776
Ensembl: ENSCHAG00000014832
UniProt: A0A6P8GXR8
LinkDB
Position
20:23641089..23665877
AA seq 1807 aa
MGDSLGLIGKRLLLLLNDRGSTGGTEMDQASWLRGTVRAVSVIGLASPGVEVSPGEGTTT
AASGLTVFVEFEDCTWRQRSWVRVYGDEVRAVLMESTIVWAARTDPASGSGATSAWPALA
FQPLVDRVGLGSLVPVEFFGNTKTLEFLPDGNSLQIFEIEKDIRNTLLQDKPSVQAAISS
WHSDCELQDILRKGSYTIQGRRVQVYQPEFNTAWAVGLVSQHDPLSHIMEITMDQGGETQ
VVDPRVMHVMLAEEYEKQSGLQDRSGKESDGGKGERRRRTASEDEDDVTLKRFKSAPEGS
TDGQIQDHSAIRLPVKENGRVPVVPDRGTTSGSSTPAASSTPTPPPLKPAPSPFSNTFPA
LGQMPNLVPGAPAPKASAPKASAPAPVTDREETYPKSAALVSPGPVTINSPSQTNAPSVA
LSQPFSQKPSSWAAPAPGAAPATENSKSPAHAPTGFRPTQSKQQPRSVFGELGAQTNGST
QENRPFGFSFAGQKEQKQPDSDPSQNLFFQCMAQTQTPSPAPVQGQNQNQSKDTNYFTAI
SESLTKEPPSLFKPSASSDVSKKSSQVQGLFGSTQLKEQLKAPEAQPAGNGVVLNKTFGT
GADGMPKLTPAFIGSTTPFGTGSLQNPTLGMGGLSNPLAPGSSGLASSSSSSSSSSGIRS
GNGNNVGLGLLATSKSSDTSHQNLFLQASSKSTNPFLARGGFPHTPFSGLTPPQPPSVSA
STPSSTLTTLPSSTSGMVPAGEEGKSNLFTMAEPPKGILPSPFATANSSTISAPTNTFTQ
MPKCTTNAQPVAKPASEGSEAGSAAHGPSEGVFRDDKTKTASSFPPFGGARSNDSAALPF
EQSAQQKFAMEERGQSSKRDSDSSTNSDLSDLSETEEAPDQVPKQGSQGPTEEGALLMQK
NKIQAVAKGRPRNKPFKAVGQSVLKDMTKLRRLKQSGEAFLQDGSCINVAPHLHKCRECR
LERYRKSREQESDDDDPNVACRFFHFRRLAFTKKGVLRVEGFLSPQHSDNMAMGLWLPSP
TVKEGLDLDTSKYILANVGDQFCQLVMSEKEAMMMVEPHQKVAWKRAVRGVREMCDVCET
TLFNIHWVCRKCGFGVCLDCYRMRKNRPPEEDDDGPEDEVFAWLKCAKGQSHEPQNLMPT
QIIPGTALYNIGDMVHAARGKWGIKANCPCTNRHIKPLVRPSAPNGLSQSGSTNTTGNGT
ATTSRPEGGEATTTSIKIEPGTEDGGTEGPGDASGSNISAQMMGTKESTPGNPSSALHWL
ADLATQKAKEETKDSSSLRSMMGRDSRPPFGLDCFNTLSKPSGSSPRLFNSLLLGSSPTQ
PKAEGSSLRDLLNSGPGKLSQGTADGGVPFPSVFSTSSTNDKNKGGLPNILDHIIASVVE
TKKTEGRRAAGGVSEGGETATVPRREGMMGLSVLDPHTSHTWLCDGRLLCLQDPSNGNNW
KIFRECWKQGQPVLVSGIHKKLKGGLWRPDAFSAEFGDQDVDLVNCRNCAIISDVKVRDF
WDGFQVISKRLQGVDGQPMVLKLKDWPPGEDFRDMMPTRFDDLMDNLPLPEYTKRDGRLN
LASRLPNFFVRPDLGPKMYNAYGLISTEDRKVGTTNLHLDVSDAVNVMVYVGIPEEEGDH
EKDADLAGRKEVMTTIEEGDVDEMTKRRVYEAKEKPGALWHIYAAKDAEKIRELLRKVGE
EQGQENPPDHDPIHDQSWYLDQILRRRLYEEYGVQGWAIVQFLGDAVFIPAGAPHQVHNL
YSCIKVAEDFVSPEHVKHCFRLTQEFRHLSTTHTNHEDKLQVKNIIYHAVKDAVGTLKAH
EPKLARS
NT seq 5424 nt   +upstreamnt  +downstreamnt
atgggggactctttaggtctcatcgggaagcgactgctgctgcttctcaatgatagggga
tccacgggcggaaccgaaatggatcaagcttcctggctgcgaggaacagtccgggctgtc
agcgttattggcttggccagccctggggtagaggtgagccccggagagggaacaacaaca
gcagcatcggggctgacggtgtttgttgaatttgaggactgcacctggagacagaggtca
tgggtgagggtgtatggggatgaggtccgtgctgtgttgatggagagcaccattgtgtgg
gcggcacgtactgatcctgcttctggaagtggtgccacatctgcctggcctgcattagca
ttccaaccactcgtagatcgcgtcggtttggggtctctggttccagtggaattctttggg
aataccaagaccttggagtttctccctgatggaaattcacttcaaatctttgagattgag
aaagatatcaggaacactcttctacaagacaagccttctgtacaggcagccatatctagc
tggcacagcgactgtgaacttcaggatatactgaggaaagggtcctacaccatacaagga
cgcagagttcaggtatatcagcctgagttcaacacagcctgggccgtggggctggtctct
cagcatgatcctctctcacacatcatggaaatcaccatggaccagggtggagaaacgcag
gtggttgatcccagggtgatgcatgtgatgcttgctgaggagtatgagaaacagagcggt
ctacaggacaggtccgggaaggaaagtgatggcggaaagggtgaacgtcgtcggagaaca
gcctccgaggatgaagatgatgtaaccctgaaaagattcaaaagtgccccggaaggaagc
actgatggacagattcaggaccattcagccattcgccttcctgtgaaggagaacggccgg
gtgccagtggttccagatcgcgggaccacgtctggaagctcgacgcctgcagccagctca
actcctacccctccccctcttaagccagcaccatctcccttctccaataccttccctgcc
ctgggacagatgcccaatttggtgcccggagcccctgcccctaaggcatccgcccctaag
gcatccgcccctgctccagtaacagacagagaggagacctaccctaaaagtgctgctctg
gtctctcctggcccagtcaccatcaattctccatcgcaaaccaacgcccccagtgtggct
ctctcacagcctttcagtcagaagccctccagctgggcagctcctgccccaggggcagct
cctgcaaccgagaattccaagtcgcctgcccatgctcctactggattccgccccactcag
tccaaacagcagcctagatctgtgtttggagagctgggtgcccagaccaatggatctacc
caggagaaccggccctttggattctcctttgctggccagaaagagcaaaagcaaccagac
tcggacccatcacagaacttgttctttcagtgcatggctcagacacagactccaagcccc
gctccggtccagggccagaaccagaaccagtcaaaggacaccaactactttactgccatc
tctgagagtttgaccaaggagccccctagcctgttcaaaccctctgcttcctcagatgtc
tccaaaaagagttctcaagtccagggattgtttgggtcaacccagctcaaagagcagctc
aaagcccctgaggcccaaccagctggaaatggggtggtactgaacaagacttttggcacc
ggagcagacggcatgcctaaactcacacctgccttcattgggagcaccaccccctttggc
actgggagtcttcagaacccaacgttaggtatgggaggactaagtaatccgttagctccg
gggtccagtggacttgcaagcagcagcagcagcagcagcagcagcagcgggatcaggagc
ggtaatggtaataacgtaggcttggggttgcttgccaccagcaagtcctcagacaccagc
catcagaacctgttcctgcaagcatccagcaagtccacaaacccgttccttgcgcgcggt
ggcttccctcatacccccttcagtgggctgacaccccctcagcccccgtcagtttccgca
tctaccccctcgtctaccctcacgaccctcccctcaagcacttcggggatggtgccagca
ggagaagagggcaaatccaacctgttcaccatggctgagcctcccaagggcatcctgccc
tccccgtttgccactgcaaattcgtccaccatttcagcccccaccaacaccttcacccaa
atgcctaaatgcacaacaaacgcacaaccggttgccaaacctgccagtgaaggctccgaa
gcgggttctgcggcacatggtccgagcgaaggggtgtttcgtgacgacaaaacaaagacc
gcgtctagcttccctccgtttgggggtgcaagatccaacgattcagctgcattgcctttc
gagcagtcggcacaacagaagttcgctatggaagaacgggggcagtcttccaagcgcgac
tcggactctagcaccaacagtgacctctctgaccttagcgagacggaagaggctcctgac
caggtgccaaagcaaggctcacagggacccacggaggagggcgctttgctgatgcagaag
aacaaaatccaagcagtggctaagggcagacctcgcaacaagcctttcaaagcagtgggc
cagtctgtgctgaaggacatgaccaagctgaggcgcctgaagcagtcgggggaggccttc
ctgcaggacggctcctgcattaacgttgcaccccacctgcacaagtgccgggagtgccgt
ctggagcgatacaggaagtcccgggagcaggagtcggacgacgatgacccaaacgtggcc
tgccggttttttcacttccgcaggctagccttcacaaaaaagggggtcttgcgagtagaa
ggcttccttagccctcagcacagcgacaacatggctatgggactgtggctgccttcgcca
acggtcaaggagggtctggacctggacacctcgaagtacatcctggccaacgtgggagac
cagttctgccagctggtcatgtctgagaaggaggcaatgatgatggtggagcctcatcaa
aaagtggcgtggaagagagccgtgcgaggagtcagagagatgtgtgacgtgtgcgagacc
acgctcttcaacatccactgggtgtgtcgcaagtgtggcttcggtgtgtgcctcgactgt
taccgaatgcggaagaatcgcccacctgaagaagacgatgacggtcctgaagatgaggta
ttcgcgtggttaaagtgtgctaaggggcagtcccacgaacctcagaacctcatgcccacg
cagattatccccggcacagctctgtacaatattggggatatggtccacgcagcacgcgga
aagtggggaattaaagcaaactgcccctgcaccaaccgacacattaaacctttagtacgc
cccagtgccccgaatggtctttcacagtcgggttcgaccaacactacaggtaacgggact
gccactacatcccgaccagagggcggggaagcgacgaccacatccatcaaaatagagcct
ggcacagaggatgggggcacagaggggccaggggatgccagcggtagcaacatcagcgcc
caaatgatgggcaccaaggagtccactccaggcaacccctcgtcagcactccactggttg
gccgacctcgccacgcagaaggcaaaagaagagacgaaagactccagctccctgcgctcg
atgatgggacgcgactcgcggcctcccttcggcctggactgtttcaacaccctgtccaag
ccctcgggctccagccccagactcttcaacagcctgctgctgggctccagccccacccag
cccaaggccgagggctccagcctccgagacctgctcaactccggccccgggaagctctcc
cagggcaccgcggacggtggcgtgcccttcccgtccgtcttctccacctcctccacgaat
gataagaataagggtggcctgcccaacatcctggaccacatcatcgcctcggtggtggag
acgaagaagacggagggcaggcgggcggccggaggggtgtccgagggcggggagacggcc
acggtgccgcggagggaggggatgatgggcctgagcgttctggatccccacacctcccac
acgtggctgtgcgacggccgcctgctctgcctgcaggaccccagcaatggcaacaactgg
aagatcttccgcgagtgctggaagcagggccagccggtgctggtgtccggtatccacaag
aagctgaaaggtggtctgtggcgacccgatgcgttcagcgcggagtttggtgaccaggat
gtcgacctggtcaactgccggaactgcgccattatctctgacgtcaaggtccgagacttc
tgggacggcttccaggtgatatccaagcgactgcaaggggtagatggccagcctatggtg
ttaaaattgaaagattggccgccgggggaagacttcagggacatgatgccaacaaggttt
gatgacctgatggacaaccttcccctccccgagtacacaaagagagatggaaggctcaat
ttggcttcacggcttcccaacttctttgtgcggcctgatttggggcccaagatgtacaat
gcttacggtctgatctcgaccgaggacagaaaagtgggcaccaccaatctgcatctggat
gtgtctgatgctgtgaatgtgatggtgtatgtgggcatccctgaagaggagggcgatcat
gagaaagacgcagacctggctggacgcaaagaggtgatgaccaccatcgaggagggtgac
gtggacgagatgaccaagaggcgggtgtacgaggccaaagagaagcccggcgcactctgg
cacatctacgccgccaaggatgcggagaagatccgagagctcctacgaaaggtgggagag
gaacaaggccaggagaatcctcccgaccacgacccaatccacgaccagagctggtacctg
gaccagattctgcgccgcaggctctatgaagagtatggagtccaaggctgggccatagtt
cagttcttaggggacgccgtcttcatcccagcaggggcgcctcatcaggtccacaacctg
tatagttgcataaaggtggcagaggactttgtgtcgcctgagcatgtgaaacactgcttc
aggctaacgcaggagttccggcacttgtccaccacacacaccaatcatgaggacaagcta
caggtgaagaacatcatctaccatgctgtgaaggatgccgtggggacactgaaagcccat
gaacccaagctagctcggtcatag

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