Clupea harengus (Atlantic herring): 105901807
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Entry
105901807 CDS
T09045
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-4
KO
K04806
nicotinic acetylcholine receptor alpha-4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105901807
04082 Neuroactive ligand signaling
105901807
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105901807
Ion channels [BR:
char04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
105901807
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GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF2417
Motif
Other DBs
NCBI-GeneID:
105901807
NCBI-ProteinID:
XP_042563664
UniProt:
A0A8M1KPN4
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Position
5:20324892..20328774
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AA seq
588 aa
AA seq
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MITSLKCWRKTPNAKCFCLTLIIICLLQPTAPTLSRSRAQAEGRLLETLFTGYNKLARPV
ANISEAVHVRFGLSIAQLIDVDEKNQMMTTNVWLKQEWYDYKLRWNPADYENVTSMRIPS
QLIWRPDIVLYNNADGDFTVTHLTKAHLFYDGRITWVPPAIYKSSCSIDVTFFPFDQQNC
TMKFGSWTYDRGKIDLVSMSNYVDQKDYWESGEWVIVSAISTYNIKKYKCCSEIYSDITY
SFLIKRLPLFYTINLIIPCLLISCLTVLVFYLPSASGEKVQLCMSVLLSLTVFLLLITEI
IPSTSLVIPLIGEYLLFIMIFVTLSISITVFVLNVHHRASHTHSMPPWVRWLFLDVVPHF
LFLRRPGKKPADAPPRKRMSSTISTREETELDLASFLSPKASLVPSCSSSPLGPQPRRHL
SLQPTSGQYLTLLKESGSQAGSLASSPINLTQQPGGEWKPYGRAKMRSLSVQYGLRERDH
ESARASTRLRSRSIQYCCIHEEATSGDAAKPPPLVQGPPSLTNNRPSARKWRMPKSKSAL
SLSVEKEPDLTLSPAMKVAIDSVQYVADHLRAEHADFSIQLSNTLISD
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgattacaagcctgaagtgttggaggaaaacgccaaatgccaaatgtttctgtcttaca
ctcattatcatctgtctccttcaacctacagctcctaccctgagcagatccagggctcag
gctgaggggagactgctggagacattgttcactggctataataaactggctcgccccgtg
gccaacatttcagaggccgtgcatgttcgctttggcctgtctattgctcagctcattgat
gtggatgagaaaaatcaaatgatgaccactaatgtctggctgaaacaagaatggtatgat
tacaagctgcgatggaaccctgctgattatgagaatgttacttccatgagaattccatct
cagttgatatggaggccagatatagttctctacaataatgcagatggagatttcactgtg
actcacttgaccaaggcccatttgttttacgatggcaggatcacttgggtgccgcccgct
atctacaaaagctcttgcagcatcgatgttaccttcttcccctttgaccagcagaactgc
accatgaagtttggctcgtggacctacgaccgcggcaagattgaccttgtcagcatgtcc
aactatgtggaccagaaggactactgggagagcggggagtgggtgatagtgagtgccatt
tccacctataatatcaagaagtacaagtgctgttcggagatctactcagacatcacctat
tccttcttgattaaaagactgccgctgttttacaccataaatctcatcattccgtgtctg
ctcatctcctgcttgaccgtgctggtcttctacctcccctcagccagtggtgagaaggtc
cagctgtgcatgtctgtgctgctgtccctcacagtcttcctcctgctcatcacagagatc
atcccctccacctcactggtcatcccgctcatcggcgagtacctgctcttcatcatgatc
ttcgtcacgctctccatcagcatcacggtctttgtgctgaacgtgcaccaccgcgcctcg
cacacccactcgatgccgccgtgggtgcgatggctcttcctggatgtggttccccacttc
ctgttcctacggcggccaggtaaaaaacccgccgacgccccaccaagaaaaaggatgagt
agtaccatctccacacgggaggagacagaattggatctggctagtttcctctcccccaaa
gccagcctcgtccccagctgcagctcatcccccctgggtccacagccgcggaggcaccta
tccctccagcccacctccggccagtacctgacccttctgaaggagtctgggtctcaagct
ggctcgctggcctcatcacccattaacctgacacagcagccaggaggagagtggaaacca
tacggccgagccaaaatgcgctctctcagcgtgcaatacgggctgcgggaaagggatcat
gagtcggcccgtgccagcactcggctccgctccagaagcatccagtactgctgcatccat
gaggaggccacatcaggtgacgccgccaagcctcctcccctggtccagggacccccatcc
ctgactaacaacaggccgtcagcacggaagtggaggatgccaaagtccaaatcagctctg
tcactaagtgtggaaaaggagcctgacctcaccttgtctcctgccatgaaggtggcaatt
gatagtgtgcagtacgttgcagaccacctcagagcggaacatgcagatttctctatacaa
ctgtccaacacacttatcagtgattag
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