Clupea harengus (Atlantic herring): 105901838
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Entry
105901838 CDS
T09045
Symbol
lmod1b
Name
(RefSeq) leiomodin-1 isoform X1
KO
K22030
leiomodin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105901838 (lmod1b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105901838 (lmod1b)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
105901838 (lmod1b)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WH2
LRR_6
Motif
Other DBs
NCBI-GeneID:
105901838
NCBI-ProteinID:
XP_031423797
UniProt:
A0A6P8FKR5
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Position
5:17783024..17790326
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AA seq
720 aa
AA seq
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MSQDYANRRKQRGLTRLGRMVSEDPDIDNLLSNLSPEELEEVEKEVMNLPDPDRSDVTLV
DQTDSQSTTTNSRGARSDPAGSDSKKSLQRNVSVEGDGKSSRKQEYLRKMGWSQEKKEYG
GVQRQDSDSCSQENQTEARSSRGPAAADGPKEEPTGAGPTGAGPTHRRRREESRDAEVKG
ERASNEKPTDRRDTRESIRASDRRDTRESIGGSSSSISKTKELISKLQEKKEESRETERK
EEVRKKDDSKMKGLISKMEEKREKEENMERLRKEEARKRDDSKTKGPMSKMEDRQSPNEA
NKTEDRKRSEPKDKTDAPSEGAKEDGGEKVEKKKDGQGKEVKNEGMENEVKTNETMKVKA
NGERMKPSVNEKGEDEEQMEKAAGETAKLTPSKKEALGNCVAEKTPKLKTKTKEEEEEEE
SASMFDETMQKVRDNDSNMTELNVNNSEVIKAKTLIQFAEALRDNTHIKTFALANCRADD
HIAYAIAGTLRVNNTLTSINLDSNLLTSKGIMALVQALQRNATLTELRFHNQRHICGGKS
EMEMTKLLKDNTTLLKLGYHFELAGPRMTMTNILSRNMDRQRQRRLQEQKQAQANGDQKG
ALDVPRVSGGFRSPRASPRPSPQPSPMPSPKTTPKMTPKKGGGPPGPGGPPPPPPPPPPP
APMMDGDFLKNSLTPVSQRRVEDRAGSRGDGKNTRDQLLASIRGNNMKQLKKVAVPKLLQ
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaagactacgcgaaccggagaaaacagcggggactaacgagactggggcggatg
gtgagcgaggacccggacatcgacaacctgctgtccaacctgtcccccgaggagctggag
gaggtggagaaggaggtcatgaatctgccagaccccgaccgcagcgatgtcactctcgtg
gatcaaacggattcacagtccaccacgaccaactcacggggcgcaaggtcggacccagcc
ggtagcgactccaagaaatccctccagagaaacgtgtctgttgagggggacggcaagtcg
agccgcaaacaggagtacctgcgtaagatggggtggagccaggagaagaaggagtacgga
ggtgtccagaggcaggacagcgactcctgctctcaagaaaaccagacggaagccagaagc
agcagaggccccgcagcagccgacgggcctaaggaagagcccacgggagcggggccgacg
ggagcggggcccacgcacaggcggaggagggaggagagcagggacgcggaggtgaaggga
gagagagcgagcaacgagaaacccaccgacaggagagacaccagggagagcatcagagcg
agcgacaggagagacaccagggagagcatcggcggcagcagcagcagcattagcaagacc
aaggagctgatctccaaactccaggagaaaaaagaggagagccgagagacggagcggaag
gaggaggtgaggaagaaggacgacagcaagatgaaagggctgatctccaaaatggaggag
aagcgagagaaggaggagaacatggagagactcaggaaagaggaagccaggaagagagac
gacagcaagaccaaggggcccatgtccaagatggaggacagacagagtccgaacgaagcg
aacaaaacagaggacaggaaaaggtccgagccgaaagacaaaactgatgctccgtctgag
ggagcgaaggaggacggaggagaaaaggtggaaaagaagaaagatggacaaggaaaggaa
gtgaaaaatgaagggatggagaatgaagtgaaaacaaatgaaaccatgaaggtcaaagcg
aacggcgagagaatgaagccgagtgtgaatgagaagggagaggatgaggagcagatggag
aaggctgcgggggaaacagccaaattgacccccagcaagaaggaggcgctgggcaactgt
gtagcagagaagacccccaaactgaagacgaagacgaaggaggaggaggaagaggaagag
tctgccagcatgtttgacgagaccatgcagaaagtccgtgacaacgactcaaacatgaca
gagctcaacgtcaacaactctgaggtcatcaaggccaagacgctgatccagttcgccgag
gcgctgcgggacaacacacacatcaagacgtttgccctcgccaactgccgggcggacgac
cacatcgcctacgccatcgctggaaccctgcgcgtcaacaacaccctcaccagcatcaac
ctggactccaacctgctgaccagcaagggcatcatggcgctggtccaggcgctgcagcgc
aacgccacgctaacggagctgcgcttccacaaccagcggcacatttgcggcgggaagtcc
gagatggagatgaccaagctcctaaaggacaacaccacgctgctgaagctgggctaccac
ttcgagctggccggcccgcgcatgaccatgaccaacatcctcagccgcaacatggaccgg
cagcggcagcggcggctgcaggagcagaagcaggcgcaggccaacggcgaccagaagggg
gcgctagacgtgcccagggtgtcgggaggattccgctcccccagagcctcgccccggccc
tcgccgcagccgtcccccatgccgtccccgaagacgaccccgaagatgaccccgaagaag
ggcgggggcccgccggggccagggggacccccccccccaccgccgccccctcctcccccc
gcccccatgatggacggggacttcctgaagaactctctgacgcccgtgtcccagaggagg
gtggaggaccgggcagggagtcgtggcgacggcaaaaacacccgagaccagctgctcgcc
tccatcagaggcaacaacatgaaacagctcaagaaggttgctgtaccaaagctgctgcag
taa
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