Clupea harengus (Atlantic herring): 105901839
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Entry
105901839 CDS
T09045
Symbol
brpf3a
Name
(RefSeq) bromodomain and PHD finger-containing protein 3 isoform X1
KO
K11350
bromodomain and PHD finger-containing protein 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105901839 (brpf3a)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
MOZ/MORF complex
105901839 (brpf3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EPL1
zf-HC5HC2H_2
zf-HC5HC2H
Bromodomain
PHD_2
PWWP
PHD
FYVE_2
PHD_NSD
DNA_topoisoIV
PHD-1st_NSD
C1_2
C1_1
Motif
Other DBs
NCBI-GeneID:
105901839
NCBI-ProteinID:
XP_031423784
Ensembl:
ENSCHAG00000014010
UniProt:
A0A6P8FE27
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Position
5:17661664..17674920
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AA seq
1280 aa
AA seq
DB search
MRKIRRRGGVAGGGFGRGRGRGRGRGRGGHHSYDDPDIQLRSTSPCRLNLSVTRETLTYA
QAQRMVEVELEGRLHRINISDPLTVITEDEMTAQDLVECNSNKENSEQTHTQTQSRARPG
RKENSEQSHTQTPNRARPGRKGRRREGKHSATTGHHSSTSKNMKKSTDTNHAAPHVPLPQ
PTFRTLEAFVPTEAPPLPLGYYRFMERSGEELDAEAEYDMDEEDVAWLEVVNQKRVSDGV
ASVSPDTFELLIDRLERESILESRSQALSQSAVDEDAYCSVCLDDECLNSNVILFCDMCN
LAVHQECYGVPYIPEGQWLCRRCLQSPSRPVDCVLCPNRGGAFKQTSDGRWAHVICAIWI
PEVCFANTVFLEPVEGMENIPSARWKLTCYLCKQKARGASIQCHKANCYRAFHVTCAQGA
GLYMKIDPVRENASNGTTFSVKKTAFCETHSPAPGEDEDEGVDEGKMGGLGGSRGHRGQR
AYTLAPPAPQNQRGGKKGQKLKGRRSSEVTGRRAAVPVLLVPQIPSYRLNKICTGVAVQR
KNQFMQRLHNYWLLKRHSRNGVPLIRRLHTHLQSQRTAEQREPDAKLQAVREELKYWQKL
RQDLEKARLLVELIRKRERFKREQMKVQQAALEMQLTPALVLLRSTLDQLQEKDSEGIFT
TPVGLKEEVPDYLEFVSDPMDFSTMRAKLEAHAYAGVTDLEADFSLMVSNCLRYNHSDTV
FHRAATQLREVGGAILRHARRQAVSTGLDPHTGMHLPNPPPQNTPTNTCWEEVDLLLVPE
NRLHLSPDQQLQALLEKLDAVMSMRTSGGRTKRIRLLRREVNSLRHKLSHCRRRPPPLCT
SPLKEEEEEEEEEEEEEGEEEEREAKRKAEYATTASRTPENHKSKTPSPTKPSCPASSPL
PGDAPPLAPPLGPESTGTRTPGRSRGRGRRRVEGRGRGAGEPEDGGLPNLPRGGENGLPT
LTTPPVSTVMGVGRRTSILFKKAKNGSRLKKAEPVCLVNGGGAEKDTSSPAQTRLQPDRT
EHAPSEPPSKPELVTEPVPSSPRHLRSRGPSESQRTHTHTPAPQTHTSASDTHTPSKDTG
LTNGSKKHRDESPDSESGTHSYETHSSPPLKRSRGKPALTKAPAAELENSDSNTGESLLV
SPEGALEDLVPLDLVWAKCRGYPSYPAMMVDPDMPREGLFHNGVPIPVPPLEVLQLGEGR
QAESDDKLFLVLFFDTKRTWQWLPLDKLYRLGLDDTMDKLRLVEGKKPNVRKSVHTAYSR
AITHLSHVRGNANFNPSSYI
NT seq
3843 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagatccggagacgaggcggtgtagccggcggcggcttcggcaggggcaggggg
agagggcgagggagagggcgagggggccaccactcctacgatgaccccgacatccagctg
cgctccacctccccgtgccgactgaacctgtccgtaacccgggagacgctgacgtacgcg
caggcgcagaggatggtggaggtggagttggagggtcgcctccaccgcatcaacatctcc
gaccccctgactgtcatcacggaggacgagatgacggcccaggacctggtcgagtgcaac
agcaacaaggagaacagtgaacagacccacacgcagacacagagccgagcgcgtccgggg
cgcaaggagaacagtgagcagagccacacgcagacaccgaaccgagcgcggccggggcgc
aagggccgccgccgggaggggaagcactccgccacgaccgggcaccactccagcaccagc
aagaacatgaagaagagcacggacaccaatcacgcggcgccacacgtgccgctgccccag
cccacgttccgcacgctggaggccttcgtgccaacggaggcgccacccctgcccctgggg
tactaccgtttcatggagcgctcgggcgaggagctggacgccgaggcggagtacgacatg
gacgaggaggacgtggcctggctggaggtggtcaaccagaagcgcgtgtcggacggcgtg
gcctccgtgtcgcccgacacctttgagctgctgatcgaccggctggagcgggagtccatc
ctagagtcgcggagccaggcgctgtcgcagagcgcggtggacgaggacgcctactgcagc
gtgtgcctggacgacgagtgcctcaacagcaacgtcatcctcttctgcgacatgtgcaac
ctggccgtgcaccaggagtgctacggcgtgccctacatccccgagggccagtggctgtgc
cggcgctgcctgcagtcgccctcgaggcccgtggactgcgtgctctgccccaaccgcggc
ggcgccttcaagcagacgagcgacggccgctgggcgcacgtcatctgcgccatctggatc
ccggaggtgtgcttcgccaacaccgtgttcctggagccggtggagggcatggagaacatc
ccctcggcgcgctggaagctcacctgctacctgtgcaagcagaaggcccgcggcgcgtcc
atccagtgccacaaggccaactgctaccgggccttccacgtcacgtgcgcgcagggcgcc
gggctctacatgaagatcgacccggtccgcgagaacgcgtccaacggaaccacgttctcg
gtgaagaagaccgctttctgcgagacccattcgcccgctccgggggaggacgaggacgag
ggcgtggacgagggtaaaatgggggggctggggggcagcaggggtcaccgggggcaacgg
gcctacacgctggccccccctgcgccccagaaccagcgcgggggcaagaaggggcagaag
ctgaagggcagaaggagctcggaggtgacggggaggagagctgccgtacctgtactgcta
gtgcctcagatcccctcatacaggctgaataagatctgcacgggcgtggccgtccagagg
aagaaccagttcatgcagcggctccacaactactggctgctgaagcgccactctcgcaac
ggggtccctctcatccgacgcctgcacacacacctgcagagccagagaaccgcagaacag
agagagccggatgcgaagctgcaggctgttcgtgaggagctgaagtattggcagaagctg
cgtcaagacctggagaaagctcgcctactcgtggagctcatccgcaagagagagagattt
aaaagagaacagatgaaggtccagcaggcggcgctagagatgcagctgaccccagcgctg
gtgctgctgcgctccaccctggaccagctgcaggagaaggactcggagggcatcttcacc
acacccgtcggactgaaggaggaggtgccagactacctggagttcgtgtccgatccgatg
gacttcagcaccatgcgggccaagctggaggcccacgcgtacgcgggcgtgacggacctg
gaggcggacttcagcctgatggtgtccaactgcctgcgctacaaccacagcgacaccgtc
tttcaccgcgccgccacgcagctgcgggaggtgggcggcgccatcctgcgccacgcccga
cgccaggccgtctccacgggactcgacccccacaccggcatgcacctgccaaacccaccc
ccccagaacacacccaccaacacctgctgggaggaggtggacttgctgttggttccagag
aaccggctgcacctgtccccagaccagcaactgcaggcgctgctggagaagctggacgcg
gtcatgtccatgcgcaccagcggggggcgcactaaacgcatccgcctgctgcgccgggag
gtcaacagcctccggcacaaactcagccactgccgacggcggcccccgcccctctgcacc
tccccactcaaggaggaggaggaggaagaggaggaggaggaggaggaggagggggaagag
gaggagagagaggccaagaggaaagcggagtacgccaccacagcatcacgaacgccagaa
aaccacaaatccaaaaccccgtcccctaccaagccgtcatgccccgcctcctctcccctg
cctggcgatgctccgcccctagccccgcccctggggccggagagcactggcacacgcacg
ccagggcggtcgagggggaggggccggaggcgggtggaggggcgagggaggggggctggt
gagccagaagacggggggctcccaaacctgcctcgggggggtgagaacggactgcccacc
ctgaccacaccccccgtctccacggtgatgggggtgggccggcggacatcgatcctcttt
aagaaggccaagaatggatcgcggctgaagaaggcggaaccggtgtgtctggtgaacggg
ggcggggctgagaaggacaccagcagcccagcgcaaacccgcctgcagcccgaccggacc
gaacatgccccgtcagaacctccctcaaaaccagaactggtcacagaacctgtcccctcc
tccccccgacacctgcgctccagaggacccagcgagagccagaggacacacacacacaca
cccgccccgcagacacacacgtccgcctcagacacacacacaccttccaaagacactggc
ctgactaatgggtctaagaagcaccgagacgagtctcccgactcagagagtggcacacac
agctatgaaacccacagctcgccccctctcaaacgcagcagaggcaagccggctctcacc
aaagcgcccgcagcagagctggaaaacagcgactccaacacaggtgaaagcttgctggtg
tcccctgaaggagcgctggaggacctggtgccgctcgacctggtatgggccaagtgccga
gggtatccctcttaccctgccatgatggtggacccggacatgccgagggaggggctgttc
cacaacggcgtgcccatcccggtgcccccccttgaggtgctgcagttgggcgaggggagg
caggcggagtctgacgacaaactctttctcgtactgttcttcgacaccaagaggacctgg
cagtggctgccgctggacaagctgtaccgcctgggtctggacgacacgatggacaagctg
cggctggtcgagggcaagaagcccaacgtccgcaagtctgtgcacacggcctacagccgc
gccatcacccacctcagccacgtcaggggcaacgccaacttcaacccctccagctacatc
tag
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