Clupea harengus (Atlantic herring): 105902055
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Entry
105902055 CDS
T09045
Symbol
elp2
Name
(RefSeq) elongator complex protein 2 isoform X1
KO
K11374
elongator complex protein 2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105902055 (elp2)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
105902055 (elp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_THOC3
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
EIF3I
WD40_Gbeta
Beta-prop_WDR75_1st
WDR55
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR19_1st
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
105902055
NCBI-ProteinID:
XP_012685032
Ensembl:
ENSCHAG00000013564
UniProt:
A0A6P3VYY7
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Position
19:16790946..16815644
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AA seq
844 aa
AA seq
DB search
MAPAVIQTCHVACCPNRSPNVVSWSKRGLIAFGTCHSVALYDPLERTAVTILNGHTSRVN
AVKWVHREDCGPETELVSGSSDNSVILWTNVDGQYPSSVKCIGHTGPVCAVDAVPLDASQ
LLIVSTASDSTVKLWLRGDGGKVECLQTLSFGSGFMMDVSLALLPGSGVPILACGGDDSK
VHIYIRHNEQFQRVLSLQGHEDWIRGVEWAARDGELLLASCAQDCSIRLWKLFAKAPPEE
HIGPGEPALRLKEDVFEVAQNGTSSVFAMSLETVLAGHENWVYGVHWHPSYIKDGKVQQP
LSLLSASMDKTMILWGPEEDSGVWVEQVRVGEVGGNTLGFYGCQMSPDGSMILAHAFHGA
LHLWHRNQNQEQAEWSPAVVISGHFNAVQDLSWDPEGEFVLSVGSDQTTRLFTPWKRKGC
TQPTWHEICRPQIHGYDMQCLAPVGRFQFVSGADEKVLRVFRAPRNFVENFANISATPLE
LLLASNDTADLPEGASTPALGLSNKAVFQGDLISQTGKEGDGNYNSVSDQYKESHFQPLT
LKAPPPEDHLLQNTLWPEVQKLYGHGFELFCLASDAARTLVASACKATKAEHASILLWSA
SSWRQLQSLPCHSLTVTQMAFSPDSRLLLAVSRDRTWSLWRRQDPAPDSTEPLFSLYANT
SKNTAVHTRIIWSCDWSFDNKYFVTSSRDKKVIVWGHAASGDVVGQGADPIRPCSSVLDV
GDSATAVAFCPFPCPDNSYLLAVGLESGQILLYKWRPGADEIPTDGDWSKGGETDASQSH
TLLVKRLRWRPRAGWAGQAGQGPEEEEEAAAAACVQLASAGDDHAVKIFNVNRQALEQQG
MSSG
NT seq
2535 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggccgtaatacaaacatgccatgtcgcatgttgtccaaatcgaagtcctaat
gttgtatcttggagtaaaagaggcctgattgcttttgggacatgccattcagtggccctg
tatgatcctctggagagaaccgcagttaccattctgaacggacacacttctcgggtgaat
gctgtcaagtgggtgcacagagaggattgtggtcccgaaacagagttggtgtcaggaagc
tcagataatagcgtgatcctctggacgaatgtggacgggcagtacccatcctcagtaaaa
tgtattggacacactggtccagtttgtgctgtggatgctgtacccctggatgcctcccag
ttgctcatcgtctctacagcttcagactccacagtgaagctatggctacgaggtgatggt
ggtaaagtggaatgcctgcagacgctatcttttgggagtggcttcatgatggatgtctcc
ttggcactgttgccaggcagcggagtacccattctggcctgcgggggggacgacagcaag
gttcacatttatatccggcataatgaacagttccagagagtgttgtctctgcaaggtcac
gaggactggatccgcggcgtggagtgggcagccagagatggggagctcctgttggccagc
tgtgctcaggactgctcgatccgtctgtggaagctctttgccaaggccccgcccgaggag
cacatcggcccgggtgaacctgccctccggctgaaggaggacgtctttgaagtggcacag
aacggcacttcctcagtctttgccatgtctctggagaccgtgctggctggccatgagaac
tgggtctatggtgttcactggcatccatcatacatcaaagatgggaaagtgcaacagcca
ctgagcctgctctcagcctccatggacaagaccatgatcctttggggcccagaggaggac
tcgggggtgtgggtagagcaggtgcgggtcggtgaggtcggggggaataccctgggtttc
tatggctgccagatgagtccggacgggtccatgatcctggcacacgcctttcatggagcg
ctccacctgtggcaccggaaccagaaccaggagcaggccgagtggagcccagctgtggtc
atctccggccactttaacgcagtgcaggacctcagctgggacccggagggggagtttgtg
ctgagcgtgggctcggaccagaccactcgactcttcacgccctggaagaggaagggctgc
acccagcccacctggcatgagatctgccgcccccagatccacggctacgacatgcagtgt
ctggccccggtgggccgcttccagttcgtctcgggcgccgacgagaaggtgctgcgcgtg
ttccgcgccccccggaactttgtggagaacttcgccaacatctccgccacccctctggag
ctgcttctggcctccaacgacactgcggatctaccagagggggcaagcacacctgcgcta
ggcctgtcaaacaaagctgtgtttcaaggtgacctgatatcccagactggcaaggagggg
gatggcaattacaacagtgtctctgaccaatacaaggagtctcatttccaacctctcact
ctcaaggcgccgccgccagaggaccaccttctccagaacactctatggccagaggtccag
aaactgtacggccacggctttgagctcttctgcctggcgtcggatgcggcaaggacgctc
gtagcctccgcctgcaaggcaactaaggcggagcacgcatccattctgctctggagcgcc
tcctcctggcgacagctgcaatctctgccgtgccacagcctcacagtcacgcagatggcc
ttctcccccgactcccgcctcctgctcgccgtctcgcgtgaccgcacctggtcgctatgg
agacgccaggatcccgcccccgacagcacagagccacttttctctctctacgcaaacacc
agcaagaatacagcggtacacacgcgcatcatctggtcctgtgactggagctttgacaac
aagtactttgtcacatcaagtcgggacaagaaggtaatagtgtggggtcacgccgcctcg
ggtgacgttgtgggccagggcgctgaccccatcaggccctgctcatccgtgctggacgtg
ggcgactcggccacagctgtggccttctgccccttcccctgccccgacaacagctacctg
ctggcagtggggttggagagtggtcaaatcctgctctataagtggaggccgggagcggac
gagatacccacagacggagactggagcaagggtggagagacagacgcctcccagagtcac
acgctgctggtgaagcgtctgcgctggaggcccagggctgggtgggcaggccaggcgggg
cagggtcctgaggaggaggaggaggccgccgccgccgcctgtgtgcagctggccagcgca
ggagacgaccacgctgtcaaaatcttcaatgttaaccgacaggctctggaacagcagggt
atgagcagtggctga
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