Clupea harengus (Atlantic herring): 105902081
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Entry
105902081 CDS
T09045
Name
(RefSeq) uncharacterized protein LOC105902081 isoform X1
KO
K25509
beta/gamma crystallin domain-containing protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105902081
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
105902081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Crystall
Ricin_B_lectin
RicinB_lectin_2
Motif
Other DBs
NCBI-GeneID:
105902081
NCBI-ProteinID:
XP_031428522
UniProt:
A0A6P8FZ78
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All DBs
Position
8:complement(29442609..29467153)
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AA seq
1816 aa
AA seq
DB search
MKRQNSWQDGIARLFKSDDSDKTAKESGTTGLEKETAFERRDDDPYDNDLDMSKSQEGSK
CNHPNSSRHIAFQGCEGEEGAICNNRDTQEASVPDNEAGSLWELPDRQSPLGLAKSLGPG
SPAPPSDSFLKRLGSLFHFFSKAETRVPQLEPNSAALSEPGGITCEADRSQQPSDTTIGQ
PSDTTIGQPSDTTIGQPSETTIGQPRGGDVGPQCQEMDKPPSEDSADMAEETAIVKPSEP
AEQTPESLPSVDEDHGTAREQAADHRMSREHPDEGQQQAFEGPAVITHTTYRGQKEVRKM
RRRQPLQIYSPISEGDESHVSRSSVSSEGVGSPHPASPSSDQLNPQRDTQSAVELTGVRS
EQTECLPPQEDHLEPSSQAADVQLAVAQDAAARTHKVEDAPFGHQGCQEVASPCAPVPGV
TNCEENNCLLDTNTSLEVQLSGLPVGLGDCSQDTSEGEGALVLGDCSQDTSGGEGALVLP
LPLGDCSQDTSGGEGAVVLPLPLDEESLRCESKAMVDIILKNALTALQKIETSERDSDVP
HEADVECEPFIYAGARHGIYQKEDYEFKDATQELEDKHVASTHVDDQVISSRAQGEGSRS
TFSSGYESIAGSDTDIRCSPAQSFEGSPLALSTSGQQVESPSLAMPEMTDSYKGKVTGDT
ESENRDNDNENGKLIRKAMFEEEDRDSEGCVAFEPKLKGLGTVTFEVDGLYSNPCLGSEP
EVEDGNTEVRPKPSQHSKQSVEIPPVSHFTIQSGSNHDANNTLVDFKVILSTEDANTDSE
SFSLACKPEEVQSQEVGRPKPLQVAPQSLESHSFKGKAMTEPTCFSQSESKPEWSSVKAH
WCLVSEDQLQNSETCVEATVLDVKESLRTFIAHSEGKHDVDIDQSASSISLLLSPPQPFL
NSGVPIIGDQEEEMDAIFVNDTGPMERPAARREKTYPFSLSPIFEEEESLQGPPATEEEL
KSAEQQTCSILSLLQSVSERLQSSAFTDSDPETTCTDSTDAFPCPRWGSLSDKEDVDEVD
HFIDQDATLPPNTLKDHFIDQDATLPSNTLKDHFIDQDPTLPSNTLKDTAEILHGCIEQT
ISGVSHEALEESGGVTTLSTPKRSASSPYYECLLKSNPTPLPQEENISGGNLSKASVKGE
QLSPRRIIPRPSVMHIYDGVTFSGAKRTFCGDVVDTEGMTFKTGVSIRVLTGCWLLYVEP
GFRGSCVVLEEGEKVLTCGEGELKEHSTDSTGQVSIGSIRTVVKDDGIPEIHCHGEGESP
VVLHSQIGNLEAVQLSNLAVKSGCWLAYELNGFRGHSAVLETGGKTTHGPGSLDVTHARS
LRPLMRGGPKVTRLLDPKMVLYELPHFQGRCRELGAHVPWVEGLPTVSSLRVLSGIWVGY
SREQYRGQQCLLEEGEYGDCQELGGSDHALLSFRFLLADCIEPAISLRNAHCPDTHPMDI
VDLDVPDVEKGGPDPAPASIRVKSGVWVAYSGKFFSGDQYILEKGLHSGPLDWGHCSGEV
MSIRPVRMSAGSREPKYLIRAYSEPHFSGDQGEYESKAADCSALHPVSFRVIHGSWVLFD
EEDCSGNQFVLSEGLYPNLTSCGSEGSAIKSLKPVPYCFSDPSIRLYSLDSFEGLETEAV
TTMDGMNGFFTQSLRVNGGLWVVYEYSNFKGRQMLLTTGEYSMWTEHSGWDTIGSLQPLG
RPKAYVQLRNRVLGSLLTAEETQDRDSPAKVSLKPAKSLDCQQWIFTDGLLKCRVGKACM
SVIGGKAQVGARVALWPQHGRTHQRWSLNQNGTISSHLNHSLVLDVRGGNGIDRDHFIVN
QLSAGPSTQYWDMELV
NT seq
5451 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaggcaaaattcatggcaagacggcatcgcaagactttttaaatcagatgattct
gacaaaacggcaaaagagagtggtaccactggcctggaaaaggagactgcatttgagagg
agagatgatgatccatatgacaatgatctggacatgtcaaagagccaagaaggcagcaaa
tgcaatcatccgaactcatcacgacacattgccttccagggctgtgaaggggaagaagga
gcaatttgtaataatcgggacacgcaggaggcgagtgtgccggacaatgaggcgggctct
ttgtgggaactccctgacaggcagtctcctctcggcctggccaaatccctggggcccggc
tcacctgcgcccccctcagattcatttctcaaaagacttgggagtctgttccacttcttc
tccaaagcagaaacgagagtacctcagctcgagccaaattcagccgcgctgtcagagccc
ggaggaataacatgcgaagcagacagaagccagcagcccagtgacactaccatcgggcag
cccagtgacactaccatcgggcagcccagtgacactaccatcgggcagcccagtgagact
accatcgggcagcccagggggggcgacgtgggtccccagtgtcaggagatggacaaacca
cccagcgaagactctgctgacatggcagaggagacagccatagtaaaaccatctgaacca
gcggaacagacaccagagagtttaccgtctgtggatgaagatcacgggacggcacgggaa
caagctgcagaccatcggatgtcgagagaacaccctgacgagggccagcagcaggccttc
gagggtccagcagtcatcacacacacaacctacagaggccagaaggaggtcagaaagatg
cggaggagacaacccttgcagatctactctcccatctccgagggcgatgagagccatgtc
agcaggtcgagtgtctccagcgagggtgtaggaagccctcaccctgcttcaccctcctcg
gatcaactcaacccacagcgggacacccaatcagctgtggagctcacaggtgtgcgctca
gagcagactgagtgtttgcctccacaggaggatcatctagagccgtcttcacaggctgct
gatgtccagttagccgttgcccaagatgctgccgcccgcacacacaaggttgaggatgct
ccttttgggcatcaaggttgccaagaggttgcctctccttgtgcgccagtgcctggcgtt
acgaactgtgaggagaataactgtttgttggacacaaatacgagcctggaggtccagtta
tctggtctgcctgttggtctgggggactgtagtcaggacacatcagagggtgagggtgca
ctagtgctgggggactgtagtcaggacacatcaggaggtgagggtgcactggtgctgccc
ctgcctctgggggactgtagtcaggacacatcaggaggtgagggtgcagtggtgctgccc
ctgcctctggacgaggagagtctgcgctgtgaatcaaaagccatggttgatatcatactg
aagaatgctctgactgcactgcagaaaatagagacgtctgaacgagacagtgacgttcct
cacgaggccgatgttgagtgtgaaccctttatatatgcaggagcaagacatggaatatac
cagaaagaggactatgaatttaaagatgctacgcaagaactggaggataaacatgttgcg
tccacacatgtggatgaccaagtcatctccagtagagcacagggggaagggagcaggtcc
accttctcgtcaggctatgagtccatcgcagggtcagacacagatatacggtgtagtcct
gctcaaagctttgaagggagtcctttagctctttcaaccagcggtcagcaggttgaatct
ccttctttggcgatgcctgaaatgacagattcttacaaaggaaaggtaacgggagatact
gaatctgaaaacagagacaatgacaatgaaaatggtaagctaataagaaaggcaatgttt
gaagaggaagatagagactctgaaggttgtgtagcatttgaacccaagctgaaaggctta
ggaactgtgacatttgaggtagacggcctatactctaacccttgccttggaagtgaacct
gaagtggaagatggtaacacagaagtccgaccaaagccctctcaacattcaaagcaatca
gtcgaaattccaccagtttcacatttcactattcagagtggatccaatcatgatgcaaac
aatacacttgtggactttaaagtcattttgagcacagaagatgcaaacacagattctgaa
tcttttagtttagcatgtaagcctgaagaggttcagagtcaggaagttgggagaccaaag
cccttgcaagttgcaccgcagtcattagaaagccatagttttaaaggcaaggccatgacg
gagcccacttgttttagccaaagtgaatctaagccagagtggagttcagtaaaggcacat
tggtgcctcgtctctgaagaccagttgcagaattctgaaacgtgtgttgaagccacagtt
ctggatgttaaagagagtttaagaacattcatagcccattctgagggcaaacatgatgtg
gatattgatcagtcagccagctcaatcagtctgttgctctcgccacctcaacctttcctc
aactcaggcgttcctatcatcggtgaccaggaggaggaaatggatgcaatatttgttaac
gacacgggacccatggagagacccgcagcgcggagagaaaagacctatcctttctccctc
tctcccatcttcgaggaggaggagagcctgcaggggccgccggccacagaggaggagctg
aagagtgcggagcagcagacctgctccatcctgtccctcctgcagtcggtgagcgagcgg
ctccagtcgagtgccttcaccgacagtgaccctgagacgacatgcacagactccacggac
gctttcccctgtccacgctggggcagcctctctgacaaagaggacgtagatgaggtggac
catttcattgatcaggacgcaacactcccccctaacaccttaaaggaccatttcattgat
caggacgcaacactgccctctaacaccttaaaggaccatttcattgatcaggatcccaca
cttccctctaacaccttaaaggacacggctgagatactacacggctgcatagaacaaaca
atcagtggagtatctcatgaagcccttgaagagagtggtggggtgactaccctgtccaca
cctaaaaggagtgccagcagcccatattacgagtgtctgctgaagtctaacccaacaccg
ttgcctcaggaagagaatattagtggtggaaacctgtcaaaagcatcggtcaagggggaa
cagctaagccctagaaggatcatcccaagaccctctgtgatgcatatctatgatggtgtg
acattctctggagcgaagcgaacattctgtggcgatgtggtggacacggaaggaatgacc
ttcaagaccggagtctctatacgagtgctgacaggatgctggctgctgtatgtggagccg
gggttccgagggtcctgtgtagtcctggaggaaggggagaaggtgctgacctgcggggag
ggggagctgaaggaacacagcactgattctacaggccaagtctccattggatccattcga
acagtcgttaaggatgatggtattcctgaaatccactgtcatggagagggtgaatcccca
gttgtccttcattcccagatcgggaatctggaggctgtccagttatctaatcttgctgtc
aagtctggatgctggctggcatacgagctgaatgggttcaggggtcattctgctgttttg
gaaacgggaggaaaaacaacacatggacccgggtcacttgatgtcacgcatgcgagatca
ctgcgtccgctgatgaggggagggcccaaagtcacaagactgctggatcccaagatggtg
ctctatgaactcccccatttccaaggccggtgcagggagctgggggcccacgtgccctgg
gtggaggggctgcccacggtctcctcgctgcgagtcctcagcggaatatgggtggggtac
tccagagaacagtaccgaggccagcagtgtttgctggaggagggtgaatacggtgactgt
caggagcttggcgggtcggatcatgctctcctctccttccgctttctactggcagattgt
attgaaccagccatctcgttgaggaatgctcactgtcctgacactcatcctatggacata
gttgacctggatgttcccgatgtggagaaaggaggccccgacccagcacccgcttccatt
cgtgtcaagagtggagtatgggttgcatacagtgggaagttcttctctggggaccagtac
atcctggagaagggcctgcactcgggtcctctggactggggccactgcagtggtgaagtc
atgtcaatcaggccggtccggatgtctgctggaagcagggagccaaagtacctgattcgg
gcctacagtgagccccacttcagcggtgaccagggcgagtacgagtcgaaagcagccgac
tgcagtgctcttcatcccgtgtcattcagggtgatccatggaagttgggtgctgttcgat
gaagaggactgctccgggaaccagtttgtgctgtcggaaggcctctatcccaacctcacc
tcatgtggcagtgagggatcagccatcaaatccctcaagccagttccatattgtttttca
gatccatccattaggctgtactccctggactcttttgaaggcttggagaccgaggccgtt
accactatggatggcatgaatggctttttcactcagtctctccgggtcaacggtggacta
tgggtggtgtatgagtacagtaactttaaaggccgccagatgctcctaacgacaggggag
tactccatgtggactgagcacagcggctgggacaccattggctctcttcagcctcttgga
cggccaaaagcttacgttcagttgagaaaccgggttctaggctcattactgactgcagaa
gagactcaggacagggactctccagccaaggtgtctctaaaacctgccaagtcattggac
tgtcaacagtggatctttactgatggactcctcaagtgcagggtggggaaggcttgcatg
tctgtgattggtgggaaggctcaggtaggggcccgagtggccctttggccccagcacgga
cgcacacaccagaggtggagtctcaaccaaaatgggaccatttcctcacatctcaaccac
agccttgtgctggacgtaagaggtgggaatggcattgacagggaccacttcatcgtcaat
cagttgtcagcgggtccgtcgacacagtactgggacatggagttggtgtag
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integrated database retrieval system
