Clupea harengus (Atlantic herring): 105902085
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Entry
105902085 CDS
T09045
Symbol
alcama
Name
(RefSeq) CD166 antigen homolog A isoform X1
KO
K06547
activated leukocyte cell adhesion molecule
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105902085 (alcama)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105902085 (alcama)
04090 CD molecules [BR:
char04090
]
105902085 (alcama)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
ALCAM
105902085 (alcama)
CD molecules [BR:
char04090
]
Proteins
105902085 (alcama)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ig_3
Ig_2
ig
I-set
C2-set_2
V-set
Ig_4
Syndecan
Izumo-Ig
FeoB_associated
Motif
Other DBs
NCBI-GeneID:
105902085
NCBI-ProteinID:
XP_031428507
Ensembl:
ENSCHAG00000008774
UniProt:
A0A6P8FZ64
LinkDB
All DBs
Position
8:29234660..29281233
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AA seq
561 aa
AA seq
DB search
MGSSSYLLGVFITAMFLQASSSSIPTIVGLYGETIEVPCNNGLVQSDDLMFTKWKYAKDD
GTHGDLLVKQAHKEEATIQATDGYKARVSISANFSLLITKATLDDQRVFTCMLVWGTNVE
EYPVEVEVRKSPLPPQIKDKAKELENGKLTKLGECAANDANPAADITWTKDGQTLVSDDK
TILIIQKVTKDPSTGLSSTSSVLQYTAGKGDVGSQFICVATQEGATQASAPEIFTIHYPT
EKVSLQVINKGPIKEGDDITLKCHADGSPPPTSFNFYLKDKKVPVMDNDTLTLPSVTRQS
AGEYKCSLLDDESKQDSQDIDVHYLDLSVSPSGTVQKNQGDSLEVTVETNTSGVPQVSWT
KDNEKLDKEPRFGPLSYQDAGLYVLEVSVAGIKKSHSFELDVQGKPTIKQLTEKASSDGN
SKVLICEADGSPQPEVQWSINGTNEKSSYNQGQVIHRITVVPSKNLTVLCTVTNSLGEDS
RAIYVPSVIVEEVPEGDRSTGNDQAKLIVGIVVGLILAAAIVGLIYWLYMKNSRQGSWKT
REKEMGTSEEEKKLENHKPEV
NT seq
1686 nt
NT seq
+upstream
nt +downstream
nt
atgggttcatcctcgtacttgctgggtgtcttcatcactgctatgtttctgcaagccagc
agcagtagtataccaacaattgttggcttgtatggagagaccattgaagtcccctgcaac
aacggattagtccaatccgatgaccttatgttcaccaagtggaaatatgcgaaagacgac
ggtacccatggcgacctcctggtgaagcaggcacacaaggaggaggccaccatccaggcc
acagacggctacaaagccagggtgagcatctcggccaacttcagcctgctcatcaccaag
gcaacgctggacgaccagagggtgttcacctgcatgctggtgtggggaaccaacgtggag
gagtacccagtggaagtggaagtgcgcaagagtccattgccaccccagatcaaagataaa
gccaaagaattggaaaatggaaagctaacaaaacttggggagtgcgctgccaatgatgcc
aaccctgctgcagatataacatggaccaaagatggccagactctagtcagtgatgacaaa
acaattttgatcattcagaaggtcacaaaggacccaagcactggcctgtcgtccacctcc
tcggttctgcagtacactgcaggcaaaggggacgtgggctcccagttcatctgcgtggcc
acacaggagggagcgacccaggcatcagctccagagatcttcaccatccactaccccaca
gagaaggtgagcctgcaggtaatcaataagggtcccattaaagaaggagatgacatcact
ctgaagtgccacgcagatggcagtcctccccccaccagtttcaacttctacctgaaggac
aagaaagtgcctgtgatggacaatgacactttgactctacccagtgtcacacgacagagc
gctggggaatacaagtgctctctgcttgatgacgagagcaagcaggattcacaagacatt
gatgtacactacctggatctcagcgtcagcccctcggggacggtgcagaagaaccaaggg
gactccttggaggtgacagtggagacgaatacctctggtgtgccccaggtctcatggacc
aaggacaacgagaagctagataaggagcctcgtttcgggccactgtcatatcaagatgct
gggctgtatgtgctcgaggtatctgtggccggaattaagaaaagccattccttcgagctg
gatgtgcagggcaagcctacgatcaagcagctgactgagaaggccagctcagatgggaac
tccaaagtcctgatctgtgaggcggacggctcgcctcagcccgaggtccagtggagcatc
aacggcaccaatgaaaaaagctcctacaaccagggacaggttattcaccgaatcaccgtg
gtgccaagcaagaatctgactgttctgtgtacagtgacaaacagcctgggagaggactcc
agggctatatatgtgccatctgttattgtggaggaagtgccagaaggagacagatccacc
ggcaacgaccaggccaagctcatcgttggcatcgtggttgggcttatcttggccgctgcc
atcgtgggtctcatctactggctctacatgaagaactccaggcaaggcagctggaagacc
cgagagaaggagatgggtacttctgaggaggagaagaagctggagaaccacaaaccagag
gtgtag
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