Clupea harengus (Atlantic herring): 105902221
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Entry
105902221 CDS
T09045
Symbol
med23
Name
(RefSeq) mediator of RNA polymerase II transcription subunit 23 isoform X1
KO
K15166
mediator of RNA polymerase II transcription subunit 23
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
105902221 (med23)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Mediator complex
Other mediators
105902221 (med23)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Med23
Motif
Other DBs
NCBI-GeneID:
105902221
NCBI-ProteinID:
XP_031437150
Ensembl:
ENSCHAG00000011470
UniProt:
A0A6P8GQR9
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Position
15:23838822..23885834
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AA seq
1403 aa
AA seq
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MAISMESQLQTIFEDVVKTEVIEEAFAGMFMDTAESERMKLISCLGAFRQYWSTLPQESH
EQCVKWIVRFIHGQHSPKRISFLYDCLAMAVETSLLPPRMVCQALVNSDSLEWERTQLWA
LTFRLFRKIIGGVDYKGVRDLLKTVLDKIQTIPNVVSSAVVQQLLAVREVVEYILDRNAC
LLPAYLAVTEIRKLYPEGALSHWLLGSLISDFVDSFRPTARINSICGRCSLLPVVNNSGA
ICNSWKLDPTTLRFPLKGMLPYDKDLFDPQTGLLRYVLEQPYSRDMVCNMLGLNKQTLNI
AQHKQRCPVLEDQLVDLVVYAMERSETEEQFDDGGTSQLLWQHLSSQLIFFVLFQFASFP
HMVLSLHQKLAGRDLIKGRDHLMWVLLQFISGSIQKNALADFLPVMKLFDLLYPEKECIP
VPDINKPQSTHSFAMTCIWIHLNRKAQSDNSKLQIPIPHSLRLHHEFLQQSLRNKSLPMT
DYKIALLCNAYSTNSECFTLPMGVLVETIYGNGSVRIPLPGTNCMAQGSVTPLPMNLLDS
LTVHAKMSLIHSIATRVIKLAAAKSSLALAPALVETYSRLLVYMEIESLGIKGFISQLLP
NVFKSHAWGILHTLLEMFSYRMHHIQPHYRVQLLSHLHSLAGVPQTNQNQLHLCVESTAL
RLITALGSSEVQPQFTRFLSDPKTVLSAESEELNRALILTLARATHVTDFFTGSDSIQGT
WCKDILQTIMNFTPHNWASHTLSCFPAPLQAFFKANNVPQESRFNLKKNVEEEYRKWKSM
TNENDIITHFSMQGSPPLFLCLLWKMLLETDHINQIGFRRGNQTPDPGHVFAVVGRVLER
IGARALVAHVRTFADFLVYEFSTSAGGQQLNKCIEILNDMVWKYNIVTLDRLILCLAMRS
HEGNEAQVCYFIIQLLLLKPNDFRNRVSDFVKENAPEHWLQSDWHTKHMSYHKKYPEKLY
FEGLAEQVSPPMPQQSQYLPIYFGNVCLRFLPVFDIVIHRFLELLPVSKSLETLLDHLGG
LYKFHDRPVTYLYNTLHYYERHLRDRTNLKRKLVHAIMSSLKDNRTPGWCLSETYLKFGM
NPREDNVWIPDDTYYCKLIGRLVDTMAGKSPGPFPNCDWRFNEFPNPAAHALHVTCVELM
ALAVPGKDVGNALLNVVLKSQPLVPRENITAWMNAIGLVITALPEPYWIVLQDRIVSVVS
SPVLTTETEWVGYPFQLLDFTACHQSYSEMCCSYVLALSHAVWHHSSIGQLSLIPKFLTE
VLKPIVKTEFQLLYVYHLVGPFLQRFQQERTRCMLEIGVAFYEMLQAVDQHCTHLSYMDP
VCDFLYHIKYMFTGDSVKDQVEKIICNLRPAMKLRLRFITHISKMEPAASAAANANAPQP
NTVSSPAPQSNPGPSNVPLSVAQ
NT seq
4212 nt
NT seq
+upstream
nt +downstream
nt
atggcgatttcaatggaaagtcaacttcaaaccatattcgaggatgttgtgaaaacggag
gtcatagaggaggcgtttgctgggatgttcatggacacagctgagtcggaacggatgaag
ttgatcagctgtttaggtgctttcagacagtattggagcactttgccacaggaatcccac
gagcagtgtgttaagtggattgtccggttcatccatggacagcacagtcctaagcgcatc
tctttcctctacgactgcctggccatggcggtggagaccagcctgttgcctcctagaatg
gtttgccaagcgttggtcaactctgacagcctggagtgggagaggacccagttgtgggcc
ttgaccttcagactcttccgcaaaatcattggaggagtggattacaagggtgtgagagat
ttactgaagaccgttttggacaaaatccagaccatccccaatgtcgtcagttcagccgtg
gtccagcagctactggcagtccgagaggtggttgagtacatacttgacaggaatgcctgt
cttctgcctgcctaccttgcagtgaccgagatcagaaagctttacccagagggtgcacta
tcacactggctccttggtagcctgatttcagactttgtggacagtttccgtcccactgcg
aggatcaactctatctgtgggagatgcagtctactgcctgtggtcaacaactctggggcc
atctgtaattcctggaagttagaccccaccacactacgcttccctctcaagggtatgctg
ccctatgacaaggatctgtttgatcctcagacggggctcctgcgctacgtgctggagcag
ccctactcccgtgacatggtctgcaacatgttagggctcaacaaacagaccttgaacatt
gctcagcacaagcagcgctgcccggtgctggaggaccagctggtggacctggtggtgtac
gccatggagcgctccgagacggaggagcagttcgacgacggcggcaccagccagctgctc
tggcagcacctgtccagtcagctcatcttcttcgtgctcttccagttcgccagcttcccg
cacatggtgctctcgctccaccagaagctggcagggagagacctcatcaaaggcagagac
cacctgatgtgggtgctcctgcagttcatctccggaagcatccagaagaacgctctagcc
gacttcctgcccgtcatgaagctgtttgacctactctaccccgagaaggagtgtatcccc
gtcccggacatcaacaagccccagtccacgcactcgtttgccatgacctgcatctggatc
cacctgaatcgcaaggcccagagcgacaactccaagctgcagatccccatcccccactcg
ctcaggctgcaccacgaatttctgcaacagagcctgcgcaacaagagcctgcccatgacg
gactacaagatcgccctgctgtgcaacgcctactccaccaactcggagtgcttcaccctg
cccatgggcgtgctggtggagaccatctacggcaacggcagcgtgcgcatccccctgccg
ggcaccaactgcatggcccagggctccgtcacgccgctgcccatgaacctgctggactcg
ctgacggtgcacgccaagatgagcctcattcacagcattgccacgcgtgtgatcaagcta
gccgccgccaagtccagcctggccctggcccctgccctggtggagacctacagccgcctg
ctggtctacatggagatcgagtccctgggcatcaagggcttcatcagccagctcctgccc
aacgtgttcaagtcgcacgcctggggcatcctgcacacgctgctggagatgttcagctac
cgcatgcaccacatccagccccactaccgcgtgcagctgctcagccacctgcactcgctg
gccggcgtgccccagaccaaccagaaccagctccacctttgtgtggagagcactgccctg
agattgatcaccgcgctggggagctctgaagttcagccacagttcacccgtttcctgagc
gaccccaagacggtcctgtcagccgagtcagaggagctgaaccgagcgctcatcctcacg
ctagccagagccacgcacgtcacagatttcttcacaggctcggattccatccagggcacg
tggtgcaaggacatccttcagaccatcatgaacttcaccccccacaactgggcctcccac
accctcagctgcttccccgccccactgcaggcgttcttcaaggcgaacaacgttccgcag
gagagccgcttcaacctgaagaagaacgtggaggaggagtaccgcaagtggaagtccatg
accaacgagaacgacatcatcacgcacttctccatgcagggctcgccgccgcttttcctc
tgtctgctgtggaagatgctgctggagacggaccacatcaaccagatcggctttagacgg
ggtaatcagacccctgaccctggccatgtttttgccgttgttggcagggtactggagagg
attggtgcgcgcgccctggtggcccacgtgcgaacgtttgccgacttcctggtgtacgag
ttctccacgtcggccggagggcagcagctgaacaagtgcatcgagatcctcaacgacatg
gtgtggaagtacaacattgttacgctggaccgcctcatcctctgcctggccatgcgtagc
catgagggcaacgaggcacaggtctgctacttcatcatccagctgctgttgctcaagccc
aacgacttccgcaaccgtgtcagcgacttcgtcaaggagaacgcccccgagcactggctg
cagagcgactggcacactaagcacatgtcctaccacaagaaataccctgagaagctgtac
tttgagggcctggcggagcaggttagcccgcccatgccccagcagtctcagtacctgccc
atctactttggcaatgtgtgcctgcgtttcctgcctgtcttcgacatcgtcatccaccgc
ttcctggagctgctgcccgtctccaagtccctggagaccctcctcgatcacctaggcggc
ctctacaagttccacgatcgcccggtgacgtacctgtacaacacgctgcactattacgaa
cggcacctgcgagaccgcaccaacctgaagcgcaagctggtgcacgccatcatgagctcg
ctcaaggacaaccgcacgcccggctggtgcctgagcgagacctacctcaagttcggcatg
aacccgcgcgaggacaatgtctggatacccgacgacacctactactgcaagctcatcggc
cggctggtggacaccatggcaggaaagtctccgggcccattccccaactgtgactggcgc
tttaacgagttccccaacccggctgcccatgccctgcacgtcacctgcgtggagctcatg
gccctggctgtgcccggcaaggacgtgggcaatgccctcctcaacgtggtgctcaagagc
caaccactggtgcctcgagagaacatcaccgcctggatgaacgctatcggtctcgtcatc
acagctcttccggagccgtactggatcgtgctgcaggaccgcatcgtgagcgtggtcagc
agtccggtgctcaccaccgagaccgagtgggtgggctaccccttccagctgctggacttc
accgcctgccaccagtcctactcggagatgtgctgcagctacgtgctggctctgtcccac
gccgtctggcaccactccagcattggacagctctccctcatccccaagttcctgacagag
gtgctgaagcccatagtgaagacagagttccagctgctgtacgtgtatcacctggtcggg
ccgttcctgcaacgcttccagcaggagaggacgcgctgcatgctagagattggtgtggcg
ttctacgagatgctccaagctgttgaccagcactgcacgcacctgtcctacatggacccc
gtctgcgacttcctctaccacatcaaatacatgtttaccggcgacagcgtgaaagaccag
gtggagaagatcatctgcaacctgcggccagccatgaagctccgcctgcgtttcatcaca
cacatcagcaagatggagccggctgcctcggccgctgctaacgctaacgccccgcagccc
aacaccgtctcctcaccagccccgcagagcaaccccggaccctcaaatgtccccctgtct
gtggcccagtaa
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