Clupea harengus (Atlantic herring): 105902281
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Entry
105902281 CDS
T09045
Symbol
sptlc3
Name
(RefSeq) serine palmitoyltransferase 3
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
Module
char_M00094
Ceramide biosynthesis
char_M00099
Sphingosine biosynthesis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
105902281 (sptlc3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
char01007
]
105902281 (sptlc3)
Enzymes [BR:
char01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
105902281 (sptlc3)
Amino acid related enzymes [BR:
char01007
]
Aminotransferase (transaminase)
Class II
105902281 (sptlc3)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
Aminotran_5
UPF0154
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-GeneID:
105902281
NCBI-ProteinID:
XP_012685285
Ensembl:
ENSCHAG00000017627
UniProt:
A0A6P3W139
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Position
13:2286273..2314365
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AA seq
553 aa
AA seq
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MARTADLAQNGHVRHVLNQDNVRNTATTKNGYHNKILRNGTGAGPLPRRKGEDSFEQAPM
HVAVLTYIGFGIVTLFGYFRDFLRAVRLEKCHVAQERDEQKDFVPLYQDFENFYTRNLYM
RVRDSWNRPICSVPGPVFDLMERVTDDYNWTYRLTGRTIKNVINMGSYNYLGFAENNADF
LRTVADKTSEYGVGVCSTRQELGNLSIHEELEKLVAEFLGVESALTFGMGFATNSMNIPA
LVGKGCLILSDELNHASLVLGARLSGAMIRVFKHNNMQSLEKLLKEAVSSGQPRTHRPWK
KILILVEGVYSMEGSLVRLPEIVALKKKYKAYLYLDEAHSIGAVGPTGRGVFEHFGINPL
DVDVHMGTFTKSFGAAGGYIAGRKELVDYLRTYSHSAVYSSAMSPPITEQIIRAMKCIMG
TDGTKEGFNRVRRLGENTRYFRSRLQEMGFIIYGNRDSPVVPLLLYLPGKVVAFSRTLLA
QNIGVVVVGFPATPITEARARFCVSAAHTRPMLDKVLKALDETGDLLRVKFSRRRPSSAR
PELREETDYEPDG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggaccgctgacctcgcccagaatggacatgtaaggcatgtactgaaccaggac
aacgtgagaaatactgcaacaacgaaaaatggatatcacaataaaattttgagaaatggc
acaggagctggccctctgcctcgtcggaagggagaggattcctttgaacaggcgcccatg
catgtggccgtcctcacctacatcggcttcggaatcgtcaccttgtttggctacttccga
gacttcctgcgggcagttaggctggagaaatgccatgtcgcccaggaacgggatgagcaa
aaggactttgttcccctttaccaagattttgagaacttttacacccgtaacctttacatg
agggtacgtgacagctggaaccgacccatctgcagtgtgccaggtcctgtgtttgacctc
atggagagggtgaccgatgactacaactggacctataggctgacggggagaaccataaag
aacgtcataaacatggggtcctacaactacctgggctttgccgagaacaacgctgacttc
ttgaggaccgtggctgataaaaccagcgagtatggggtgggggtctgcagcactagacag
gaacttggtaacctgagcatccacgaggagctggagaaacttgtggctgaattcctaggg
gtggagtctgctttgacctttggaatgggcttcgccacaaattccatgaacattccagca
cttgttggcaagggttgccttatcttgagtgacgaactcaaccatgcgtctctcgtcttg
ggagccaggttgtctggggcaatgatacgagtgttcaagcacaacaacatgcagagcttg
gagaagctgctgaaggaggcggtgagctcgggccagccacgcacacaccggccctggaaa
aagatccttatcctggtggagggcgtctacagtatggagggttcattagtgcgtctgcca
gagatcgtggccttgaagaagaagtacaaggcctatctgtatctggacgaggcccacagc
atcggtgccgttggccccacgggccggggtgtctttgagcacttcgggattaaccccctg
gatgtggacgtgcacatgggaaccttcaccaagagcttcggggccgccgggggatatatc
gctggcagaaaggagctggtggactacctgcgtacctactcccacagtgctgtctactcc
tccgccatgtcgccgccaatcacagagcagatcatcagagccatgaaatgcatcatggga
acggacggcaccaaagaggggttcaacagagtgcgtcggctgggggagaacaccaggtac
ttcaggtcacgtctgcaggagatgggcttcatcatttacggcaacagagactcccccgtg
gtccctctgctgctctacctaccagggaaagttgtggctttctcacgcacgttgctggct
cagaacataggcgtggtggtggtggggttccccgccacgccaatcaccgaggcccgggct
cgcttctgcgtgtcggctgcccacaccagacccatgctggacaaggtgttgaaggcgctg
gacgagacaggcgacctgcttcgggtgaagttctcccgccgcaggccctcctccgcgagg
ccggagcttcgcgaagagaccgactacgagccggacggctga
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