Clupea harengus (Atlantic herring): 105902370
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Entry
105902370 CDS
T09045
Symbol
tmc2a
Name
(RefSeq) transmembrane channel-like protein 2-A
KO
K21988
transmembrane channel-like protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105902370 (tmc2a)
03037 Cilium and associated proteins [BR:
char03037
]
105902370 (tmc2a)
Transporters [BR:
char02000
]
Other transporters
Pores ion channels [TC:
1
]
105902370 (tmc2a)
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
105902370 (tmc2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
105902370
NCBI-ProteinID:
XP_031433791
Ensembl:
ENSCHAG00000024529
UniProt:
A0A6P8GAZ4
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All DBs
Position
12:complement(13429209..13438875)
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AA seq
923 aa
AA seq
DB search
MPRKGETARKTEDVGIDMDGEVESGSEVDTKPRGRGNRGQGAGRRGRKAESEEAEDDEDE
EEEAPRNKRAPNRRKAGKKAQDTEEESEDAPPKRRRGGNNNKKKGAKDTEDESEEDTKGK
GRNKKGAAATDKKGAAAADKKGKGKGKDKDDDKKKKKGKGSSSDSKTSSEEESMSEGEME
RLKEEVVEKKTLIATLRSKPWRMKRRLAVLREAQVFVDKFEGALGKGKGKKWYAFKVMMM
KKWIKFSRDFDNFKTACIPWERKIKEVESHFGSSVASYFIFLRWMYGLNLVLFALTFGLV
VIPEMLMGLPYGSIPRKTVPRDDQPTAMDYSVLMDFNGYCKYSALFYGYYNDQRTVGPLK
FRLPLSYLLVGIGTFGYSLMVVIRTMAKNADVGGGDDADSEFTFSWKMFTSWDYLIGNPE
TADNKFASVTTSFKESIVDEQENQKDENIHLRRFLRVLANFMIFCTLGGSGYLIFFVVKR
SQEFAHMDDLGWYEKNEVEIIMSLLGLVCPPLFETIAELEDNHPRIALKWQLGRIFALFL
GNLYTFLFALFDEVNNKLEDEMNIKNNSIWFLKEYHANFSLYNNDSEATAPPIPPADAIR
GPCWETSVGVEFVKLTVSDIQVTYLTILIGDFLRAFIVRFLNYCWCWDLEAGFPSYGEFD
ISGNVLGLVFNQGMIWMGAFYAPGLVGINVLRLLSSMYYQCWAVMCCNVPHARVFKASKS
NNFYMGLLLLILFMSLLPVVYTIMTLPPSFDCGPFSGKEKMFYVIMETIEMDLPAFIGTL
FGYVANPGLIIPAVLLMVLAIYYLNAVSEAYMHANNELKKKMQMARDEDKNRRNNTNSTN
QVQKDLEDLLPGRSWEPPPPPEDNTEKGGRAARVKPGAAGDVKVQKDLSLASANPNARGP
VTSEPARRGQGSLPAKPRGAPKQ
NT seq
2772 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgaaaaggggaaacggcaagaaaaacggaagatgtgggaatagatatggatggt
gaagtggaaagcgggagcgaggtggataccaagcccaggggcaggggtaacagagggcaa
ggcgctggcagaaggggcagaaaggcagagagcgaggaggcagaggacgatgaggacgag
gaggaggaggctcctcgaaacaaacgagcgcccaacaggaggaaagcgggaaagaaggcc
caggacactgaagaggagagcgaggacgcccccccgaagcgaagacgtggcggcaacaac
aacaagaagaaaggtgcaaaagacacagaggacgagagcgaagaggacacaaagggcaaa
gggaggaacaagaagggagcagctgccacggacaagaagggagcagctgccgcggacaag
aagggcaaagggaaaggaaaagataaggatgatgacaaaaagaagaaaaaaggcaaagga
agcagctcggactccaaaaccagttccgaggaggagtccatgtcagagggagagatggag
agactgaaggaggaggtggtggagaagaagactctaattgctaccctaaggagcaagcca
tggcgtatgaagcgcagattggcagttctcagagaagcccaggtgtttgtggacaaattt
gaaggcgctttggggaagggcaaaggcaagaagtggtatgccttcaaagtgatgatgatg
aagaaatggatcaagttttcgagagattttgacaatttcaagacagcatgcataccatgg
gagaggaaaatcaaagaagtggaaagtcactttgggtcatcggtggcctcctacttcata
ttcttgcggtggatgtatggactgaacctggtgctattcgctttaacgttcgggcttgtg
gtaatcccagagatgctaatggggctaccatatggatccatacctcggaaaacagtacct
agagatgaccagcctacggctatggattattctgttcttatggacttcaatggttactgc
aaatactcagcgcttttctatgggtattacaatgaccaaaggactgttgggcctctgaaa
ttcagactgccactctcttatctgctggtggggattgggacctttggctacagcctcatg
gttgtcattagaacaatggctaaaaatgctgatgttggtggaggggatgatgcggatagt
gagttcactttctcctggaagatgttcaccagctgggattacctcattggcaatcctgag
acagcagataataaattcgcctctgttaccacaagtttcaaggagtcaattgttgacgag
caggagaaccaaaaggatgagaacatccacctgagaaggttcctgcgggtgctggcaaac
ttcatgatcttctgcactctggggggcagtggctacctcatcttcttcgtggtcaaacgg
tcacaggagttcgcccacatggatgaccttgggtggtacgagaaaaatgaggttgagatc
atcatgtctttgctgggcctagtgtgccctcccctgtttgaaactattgctgagctggag
gacaaccatccccgtattgccctcaaatggcaactaggccgcatatttgcccttttcctg
ggcaacctttacaccttcctctttgctctgtttgacgaggtcaacaacaaattggaggat
gagatgaacataaagaataactccatttggttcttgaaggagtaccacgccaacttctcc
ttgtacaacaatgacagtgaggccactgctccccccatcccccctgctgatgccatccgt
ggaccatgctgggaaaccagtgttggagttgagtttgtgaagctgactgtttcagacatc
caggtgacctacctgaccattctcataggtgacttcctacgggccttcatcgtgaggttt
ctcaactactgctggtgctgggacctggaggccggatttccatcatatggagagtttgat
atcagtggcaatgtcctgggactagtcttcaatcaaggaatgatctggatgggtgcattt
tatgcccctggtttggttggcatcaacgtcttacgtctcctgagctccatgtactaccag
tgctgggcagtaatgtgctgtaacgtgccccacgcgagagtcttcaaggcctccaagtcc
aacaacttctatatgggcctcctgctcctgattctcttcatgagcctgctgcctgttgtc
tacaccatcatgactctgccgccctcttttgactgtggtcccttcagtggtaaagaaaag
atgttttatgtcatcatggaaacaattgaaatggacctgccagccttcataggaacgcta
tttggctatgtggcaaacccagggctcatcataccagctgttctgctcatggtgctggcc
atatattacctgaacgctgtatcagaggcctacatgcatgccaacaatgagctgaaaaag
aagatgcagatggcaagagatgaggataagaacagacggaacaacacgaacagcacaaac
caggtgcagaaggacttagaggatttgctcccagggcgctcttgggaacctccccctcct
ccggaggacaacacagaaaaaggagggagggctgccagagtgaaaccaggtgctgcaggg
gacgttaaagtgcagaaagatttgtcactggcatcagccaatcccaacgctcgagggccc
gtgaccagtgaaccggcccgtcggggacaaggatcacttccggcaaaaccgcggggtgcc
ccaaaacagtaa
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