KEGG   Clupea harengus (Atlantic herring): 105902405
Entry
105902405         CDS       T09045                                 
Symbol
per1a
Name
(RefSeq) period circadian protein homolog 1a
  KO
K21944  period circadian protein 1
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    105902405 (per1a)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    105902405 (per1a)
SSDB
Motif
Pfam: Period_C Per3-like_PAS-A bHLH_PER PAS_11 PAS_3 PAS
Other DBs
NCBI-GeneID: 105902405
NCBI-ProteinID: XP_012685443
Ensembl: ENSCHAG00000004574
UniProt: A0A6P3VZH8
LinkDB
Position
8:complement(12808837..12821587)
AA seq 1436 aa
MSKANSEATVSSNAIGGPAGAEDDDEVGREASSPMLSGSSLSSGEQKPSNGKRDTRTPRR
TNLDDTDGGSASSGNDSAERECEGRRGREASSCSSHNGKDSALETTESKSSNSHSPSPPS
SSMAYSLLSGGSSEQDPPSTSGCSSDHPQRLQTQRELLKALRELKIRMPPDHRGKGRSST
LASLQYALSCVKQVRANQDYYHQWNVEETHGCCLDLSTFTIEELDNITSEYTLQNTDTFS
VAVSFLSGKVVYISPQASSRLCCKPEQLQGALFSELLAPQDVSTFYSSTSPCKLPAWPSC
NTSDFPGDCTQEKSMFCRISGAKGSEVEVRYYPFRLTPYQLTLRDSDNSQPQPCCLLIAE
KVHSGYEAPRIPDDKRIFTTSHSPSCVFQEIDERAVPLLGYLPQDLVGTPMLYYLHPEDR
PLMLTIHKKILQFAGQPFDHSSMRMCARSGEYLTIDTSWSSFINPWSRKVAFIVGRHKVR
TSPLNEDVFTPPGGNEVRSVSPDVAQLSEKIHRVLVQPVHCGSSQGYGSLGSGTEQHAST
GSSSDSAGRGNELRSLSQNQLRPMTFQQMCKDIHMVKTSGQDVFMESRNRPPPCKYSSLV
VRANLQKSVENSKEVLQGAPPSLKPLPVSTPPPRKERVTAYSYQQLNCLDSIIRYLDSCN
VPNTVKRKCGSSSGTTSSTSDDDKVTGITETLVVADGSKPALSPLALHCKAESVVSVTSL
CSFSSTIVHVGDKKPPESDIVMMEEAPTTPTLTPTPTPAPSTPTLATSSMTQPPPLPSAS
PSTSTLPGKDTRRTGSAATPGGGAGLATVGLTKEVLSTHTQQEEKAFLNRFKGLSELLVP
QPKPSPPPAGKGVRSSQDYPAGGTSGRKRGRGGKRRKHQPEGSHLGSYPAPFTMPPRPPT
ALFNPGCFPTGPHISMGPQTSSSSWPSSVGSHASIPPTNPQFAPGCLPYYPIYPPQMPHM
PQMPTSQVIPSMLPPVMALILPNYMYPQLGGLPQLNLAGAAPLNTPIPNLNTATAPQPMP
QLNPFTPQFNPAMPQMNPVLNPAAVGHPGLMPSLMPFNPTMPAVPQPFYNPNIMYPPFPN
TVPMTPASGNLFTHGPSRSCTPQSGGGLANEERDDADSPLFHSRCSSPLNLVQLEELAGT
KAEGSAMGLQQTPPPVGAASQGMSGSNSNGDTNGDDDNVETNESNQDAMSTSSDLLDLLM
QEDSRSRTGSATSGSGSSGSGLGSSGSGSNGCSTTGSGSGTGSSNTSKYFGSVDSSENDH
SHKQQAGDATDDQFIKYVLQDPIWLLMANTDDKVMMTYQLPSRDRETVLAQDLAALKAVQ
KQQPRFTEQQRKELSQEHPWILTGGLPDAINVTACTDCSGTKVKPVSPLFLKDKLHLQLP
EEVDTTGHTARTSAASASSAPPSDDVAEAEEAERLPVRPSDEELEVTSSAEVCAEE
NT seq 4311 nt   +upstreamnt  +downstreamnt
atgagtaaggccaattctgaggccactgtcagtagcaatgccatcggagggccggccggc
gctgaagatgacgatgaggtaggacgtgaggcaagctcccccatgctgagtggcagctcg
ctgtccagtggggagcagaaaccatccaatgggaaaagagacaccaggactcctcgacga
accaacctggacgacacagacggcgggagtgcgtcgagtgggaacgactcggccgagcgg
gagtgcgagggccgccgcggccgagaggcctcttcatgcagctcgcacaatgggaaagac
tcggccttggagactacagagagcaagagctcaaactcccacagcccgtcacctcccagc
agctcaatggcgtacagcctgctgagcgggggcagctcggagcaggacccccccagcacc
agcggttgcagcagcgatcacccgcaacgcctgcagacccagcgggagctgctcaaggcc
ctgcgtgagctcaagatccgcatgccacctgaccacaggggcaagggacgctccagcacg
ctggcctccctccagtatgcactcagctgcgtcaagcaagtccgcgcaaatcaggattac
taccaccagtggaatgttgaggagacccacggatgctgtttggatctctccacttttacc
attgaggagttggacaacatcacttctgaatacactctccaaaacacagacactttctca
gtggcagtgtccttcctgtcagggaaagtggtgtacatctcaccccaggcctcctcccgg
ctgtgctgtaaacctgagcaactgcagggggcgctcttctcagagctgctggcgccacag
gacgtcagcactttctacagtagcacctctccctgcaagctgccagcttggccctcctgc
aacacctctgactttccaggcgattgtactcaggagaagtccatgttctgccggatcagt
ggtgcgaaggggagtgaggtggaggtgcgctactaccccttccgtctgactccttaccag
ctgaccctgagggactcggacaactcccagccccagccctgctgccttctcatcgctgag
aaagtgcactcaggatacgaagctcctcgtatccctgatgataaaagaatatttactaca
agccatagcccgagctgtgtctttcaagagatcgatgaaagagctgtacctttgctggga
tatctgccgcaggacctggtggggactcccatgttgtactaccttcaccccgaggacagg
ccccttatgctgaccattcataagaagatccttcagtttgcaggccagcctttcgatcac
tcttccatgcgtatgtgtgcgcggagtggggagtatctgaccatcgacacaagctggtcc
tctttcatcaacccctggagccgcaaagtggccttcatcgtgggacggcacaaagtcaga
acgagtccactgaatgaggatgtgttcacgccccctggtggcaatgaggtgcgcagcgtg
tccccggacgtggcccagctgagcgagaagatccaccgtgtgctggtgcagccggtgcac
tgtggcagctcgcagggctacggcagcctgggcagcggcaccgagcaacacgccagcacc
ggctcctctagcgacagcgccggacgcgggaacgaactccgcagcctctctcagaaccaa
ctcagacccatgactttccagcagatgtgtaaagatatacacatggttaaaacaagcggc
caggatgtcttcatggagtcacgaaacagaccaccaccttgtaaatattctagcttggtg
gttcgagcaaatctgcagaaatctgtagaaaattccaaagaggtacttcagggggctcca
ccctctctgaaacccctccctgtatcaacaccccctcccaggaaagaacgggtcacggcc
tactcgtaccagcagctgaactgcctggacagtatcataaggtacctggacagctgtaac
gtgcccaacacagtaaagaggaagtgtggctcatcctctggcaccacctcctccacctct
gatgacgacaaggtcacaggtataacggagacgctggtggtggccgacggctccaaacct
gctctatctcccctggcgctgcactgtaaggcagagagtgtggtgtctgtcacctccctg
tgcagtttcagcagcaccattgtccatgttggtgacaagaaacccccagaatcagatatc
gtcatgatggaagaggctccaaccacgcccaccctcacaccaaccccaaccccagccccc
tccacgccaactctagctaccagcagcatgacccagccacctcccctgccctccgcctcc
ccgagtacctctacactccctggcaaggacacccgcagaacagggtcagcagcaacacca
ggaggaggtgctggcttggctacagtgggcctgactaaggaggtgctgtctactcacaca
cagcaggaggaaaaggccttcctcaaccgtttcaagggcctgagtgagctgcttgtgccg
cagcccaagcccagtcctccacctgcaggcaaaggtgttcgtagctctcaagattaccca
gcaggaggcaccagtgggcggaagcgaggccggggaggaaagaggcggaagcaccagccc
gagggctcccatcttggcagttaccccgcgcccttcactatgcctcctcgaccccccacg
gccctgttcaaccctggctgtttccccaccggcccgcacatctccatgggcccccagacc
tcctcctcctcatggccgtcctctgtgggctcccatgccagcataccgcccacaaaccct
caatttgcccccggctgcctgccttattatcccatctacccgccccagatgccccacatg
ccccagatgccgacctcacaagtaattccatccatgctcccgccggttatggcgttaatt
ctgcccaactacatgtaccctcagctcggtgggctgccacagctgaaccttgctggcgcc
gcaccgctcaacactcccattccaaacctcaacactgcaactgcaccccagccaatgccc
cagctaaaccctttcaccccccagtttaaccctgctatgccacaaatgaacccagttctg
aacccagcagcagtgggccatccaggtttaatgccatcattgatgccatttaatcccacc
atgcctgctgtcccgcagcccttctacaacccaaatatcatgtaccccccgttcccaaat
acagtccccatgacccccgcctctgggaacctcttcacccatggcccgtcacgctcctgt
acgccccagtcgggcggggggctagccaatgaggagcgagatgatgcagactcacccctc
ttccactcgcgatgctcctccccgcttaacctggtccagctggaggagctggccggcacc
aaagccgagggctcagcgatgggactgcaacagaccccacccccggtgggagcagcgtcc
caggggatgtcaggaagcaactccaatggagacaccaatggagatgacgataatgtggaa
accaatgagtccaaccaggatgccatgtcaacctccagtgaccttctggaccttctgatg
caggaggactcccgttcaagaactggttctgccacctctgggtctggttcttccggttct
ggtttgggatcctcaggctctggatccaatggatgcagcaccacagggagtggtagtgga
accggtagcagtaatacgagcaagtactttggcagtgtggactcctccgagaacgaccac
tcccacaagcagcaggcaggagacgccacagacgaccagttcatcaagtatgtcctccag
gaccccatctggctccttatggccaacacagacgacaaggtcatgatgacctaccagctg
cccagcagagacagggagacggttcttgcgcaggatctggcggctctgaaggcggtgcag
aagcagcagccgcgcttcaccgagcagcagaggaaggagctgagccaagagcacccgtgg
atcctcaccggaggcctgcctgacgccatcaacgtcacggcctgcacagactgcagtggc
accaaggtcaaacctgtatcaccgctattcctcaaagacaagctccatctccagctgccg
gaggaggtcgacaccactggtcacacagccaggacctccgccgccagcgcctcctccgcc
cccccgtcggacgacgttgcagaagcagaagaggcggagcgtctgcccgtgaggcccagc
gacgaggagctggaggtgacgtcgtccgcggaggtgtgtgcggaggagtga

DBGET integrated database retrieval system