Clupea harengus (Atlantic herring): 105902409
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Entry
105902409 CDS
T09045
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105902409 (gigyf1b)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105902409 (gigyf1b)
Surveillance factors
Other surveillance factors
105902409 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
105902409
NCBI-ProteinID:
XP_031427780
Ensembl:
ENSCHAG00000004162
UniProt:
A0A6P8FWM3
LinkDB
All DBs
Position
8:12654419..12675455
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AA seq
1122 aa
AA seq
DB search
MTAESLNFGPEWLRALSRGGSVTSPPQSPAMPKSKLADYRYGREEMLALYIKDNKVPDQL
QDKEFGPVLQDQPLQPLALEPLTEEEQVEDWLSLRNFSMSVNSSAVLRLMGKGGGAPPMG
VARGRGTVRGGGGRGRGRGEGGFYQRGPEEGEVGFGRSREINRSQSWDDRGERRFEKPLR
REGVRVGFEEGAAVVPRKDYSRSDSDNWRTLREEQQEEEEAAAAAAAAAAAAGGVAAAAP
AAAASAGTTEPGSSWRTMGGRHDDGGPRSAGWRDHTGEGRRKKFDFDFDFGEGGRRRNMD
NDGLPEWCTDEEDGEMGTFDSSGAFMCIKKNLRDPIPEDQEFEFEALEEENGLESAGEGE
DGGLVMLTVSEVEMMSMTGPSFSSPPALSAPPPPQSQPPSTNTEPASSAAAPPTNTTREP
AEDKAPPGGIARLSTNSSQSVSSPPSSAAARADLPPAGGDNEEEERMKHLQQEAEKMVAS
LQDTSLEEERFTQALQESHGVGMGVAVGAGAGASASTHTHPHTHQTGASAHSHSHPHPAT
SHSLSYPASALPLSHEAAMKWFYKDPQAEIQGPFSTVEMCEWFQAGYFTMTLLVKRGCDE
GFQPLGDVIKMWGRVPFSPGPSPPPLLSNMDQEVFKKQLEQVASAALYQQQLQRRYQHMN
SSSGGSGSSSGSSSRCGESGMMPAMNRSMSVPDTGPMWDMHTSASQQSGGEASLWDLTIG
NLPQGLSLEQLQQKLQQERREAELRAKREEEDRKRREEKRRQQQEEQKRREEEEEIFHRK
QQCRQQQELLMKLLQQSQQQQQPVGSVGAQSQGPCWNSAQPKPPKTSLNLLEMETERLLK
QQQRAQQQQQQQQRERQQQQQQHAGLTMGQWSDGGVGGMWGAGGLEGKVTASGGGGGGGG
GGGSSGGMGLWDEAVKNQSSHRSMGLKNSRSSPSLSEQYMMRRKQTEDEEKLLRLLQGIK
PQPQDGFTTWSEQMLHALNTNANNSSSSQEVATIVAYLKEVESPYEVHDFIRAYLGDTAE
AKEFAKQFLERRAKQKANQQRQQQQQQQQLSKELSGLNMNFPLQSMFQASHSGKSSVYDT
QGSKMKKKPNMMLHSDPSILGYSFLGAGERMILGEMETVEDY
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagagtcccttaacttcggtccagaatggctccgtgcactatctcgagggggg
agtgtgacctctcctcctcaatcccccgccatgccaaagtccaagctggccgactatcgc
tacggccgcgaggagatgctagcactttatatcaaagataataaggttccagatcagctg
caggataaggagtttggcccggtcctgcaggaccaacctctgcagcctctagctctggag
cctctgactgaggaggagcaggtagaagattggctatcgttgaggaacttttccatgtct
gtgaacagctctgctgtgctgaggctcatggggaaagggggcggggcccctccgatgggt
gtggcccgtggcagagggactgttcgaggaggaggaggaagaggaaggggaagaggagag
ggcggattctaccaaagaggtccagaggagggcgaggtgggctttggccgcagcagagag
atcaatcgcagccagagctgggatgaccgaggagagcggcgatttgagaagcccctgcgg
agagaaggggtgcgggtgggcttcgaggaaggggcggccgtagtgccacggaaagactac
tcgcgctctgacagcgacaactggcgcacgctgagggaggagcagcaggaggaggaggaa
gcggcagcagcagcggcggcggcggcagcagcagcaggaggagtagctgcagcagcacca
gcagcagcagcatcagctggaacaactgagccaggttcaagctggaggaccatgggaggg
agacatgatgacgggggccctcgctcggccggatggcgcgatcacactggggagggccgg
cgtaagaagtttgactttgacttcgacttcggggaggggggccggcggcgcaacatggac
aacgacgggctccctgagtggtgcactgacgaggaggacggcgagatgggtaccttcgac
tcgtccggagccttcatgtgcatcaagaagaacttgcgggaccccatccctgaggaccag
gagtttgagtttgaggctctggaggaggagaacggtctggagagtgctggagagggagaa
gatggtgggctggtgatgctgactgtaagtgaggtggagatgatgtctatgactggacct
tcgttttcctcgccccctgccctctctgcccctccaccacctcagtctcagcccccctcc
accaatacagagcctgcatcctctgctgcagcaccgcccacaaacaccactcgagagcct
gctgaagataaggcaccaccagggggcatcgctcggctgagcaccaactcctcccagagt
gtctcctctcccccttcatctgccgctgcaagagcagacctcccaccagcaggtggagac
aatgaggaggaggagcgcatgaagcacttgcagcaggaggcagagaagatggtggcgtcc
cttcaggacacgtccttggaggaggagcgtttcacacaggccctgcaggagagccacggt
gtgggcatgggtgtggccgtgggtgctggggcgggagctagcgcctccacgcacacacac
ccccacacgcaccagacgggggcctcggcgcattcccattcccacccccacccggccaca
tcgcactccctgtcgtacccggccagcgcactcccgctctctcacgaggcagccatgaag
tggttctacaaagacccccaagcagagatccaaggcccattctccacagtggagatgtgt
gagtggttccaggcgggctacttcaccatgaccctgctggtcaagcggggctgtgacgag
ggcttccagcccctgggcgacgtcatcaagatgtgggggcgcgtgcctttctcccccggg
ccctccccaccacccctgctgagcaacatggaccaggaagtatttaagaagcagcttgag
caggtggcctctgcagccttgtaccagcagcaactccagaggagataccagcatatgaac
agcagcagtggcggaagcggcagcagcagtggcagcagcagcaggtgtggggagtccggc
atgatgccagctatgaacaggtccatgtctgtgccggacaccggacctatgtgggatatg
catacctcagcttcacagcagtcaggcggtgaagccagtctgtgggacttaaccataggc
aacttacctcaggggctaagtctggagcagctgcagcagaagcttcagcaggagcgtcgt
gaagctgaactcagggctaagagggaggaggaggacaggaaacggagggaggagaagaga
aggcagcagcaggaggagcagaagaggagagaggaggaggaggaaattttccaccgcaaa
cagcagtgtcgtcagcagcaggagctgctcatgaagctgctccagcagagccagcagcag
cagcagccggtggggagcgtgggggcccagtcacagggtccctgctggaactcagcccag
cccaagccccctaagacctccctcaacctgctggagatggagaccgagaggctgctgaag
cagcagcagagggcccagcaacagcagcagcagcagcagagagagcggcagcagcagcag
cagcagcatgctgggctgacgatgggccagtggagtgatggtggcgtgggggggatgtgg
ggcgctgggggtctggaggggaaggtgacagccagcggaggtggtggtggtggtggtggt
gggggcggcagctctggagggatgggcctgtgggacgaggccgtgaagaaccagagcagc
caccgtagcatgggcctcaagaacagccgcagcagcccctcacttagcgagcagtacatg
atgcggcggaagcaaacggaggatgaggagaagctgctgcgtctgctgcagggcatcaag
ccgcagcctcaggacggcttcaccacctggagcgagcagatgctgcacgcgctcaacacc
aacgccaacaactcctcctcctctcaggaagtggccaccatcgtggcgtatcttaaggag
gtggagtcgccttacgaggtgcacgacttcatccgcgcctacctgggggacactgcggaa
gccaaagagttcgccaagcagttcctggagcgtcgtgccaaacagaaagctaaccagcag
aggcagcagcagcagcagcaacagcagctatcaaaggagctgtctggactgaacatgaac
ttccctctgcagtccatgttccaggcatcccatagtgggaaaagcagcgtgtacgacacc
caggggagcaagatgaagaagaagcccaacatgatgctccactctgaccccagcattcta
ggctactcattcttgggtgctggggagcgaatgatcctgggcgagatggaaaccgtggag
gattactaa
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