Clupea harengus (Atlantic herring): 105902409
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Entry
105902409 CDS
T09045
Symbol
gigyf1b
Name
(RefSeq) GRB10-interacting GYF protein 1 isoform X1
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105902409 (gigyf1b)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
105902409 (gigyf1b)
Surveillance factors
Other surveillance factors
105902409 (gigyf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
TRI4_N
Motif
Other DBs
NCBI-GeneID:
105902409
NCBI-ProteinID:
XP_031427780
Ensembl:
ENSCHAG00000004162
UniProt:
A0A6P8FWM3
LinkDB
All DBs
Position
8:12654419..12675455
Genome browser
AA seq
1122 aa
AA seq
DB search
MTAESLNFGPEWLRALSRGGSVTSPPQSPAMPKSKLADYRYGREEMLALYIKDNKVPDQL
QDKEFGPVLQDQPLQPLALEPLTEEEQVEDWLSLRNFSMSVNSSAVLRLMGKGGGAPPMG
VARGRGTVRGGGGRGRGRGEGGFYQRGPEEGEVGFGRSREINRSQSWDDRGERRFEKPLR
REGVRVGFEEGAAVVPRKDYSRSDSDNWRTLREEQQEEEEAAAAAAAAAAAAGGVAAAAP
AAAASAGTTEPGSSWRTMGGRHDDGGPRSAGWRDHTGEGRRKKFDFDFDFGEGGRRRNMD
NDGLPEWCTDEEDGEMGTFDSSGAFMCIKKNLRDPIPEDQEFEFEALEEENGLESAGEGE
DGGLVMLTVSEVEMMSMTGPSFSSPPALSAPPPPQSQPPSTNTEPASSAAAPPTNTTREP
AEDKAPPGGIARLSTNSSQSVSSPPSSAAARADLPPAGGDNEEEERMKHLQQEAEKMVAS
LQDTSLEEERFTQALQESHGVGMGVAVGAGAGASASTHTHPHTHQTGASAHSHSHPHPAT
SHSLSYPASALPLSHEAAMKWFYKDPQAEIQGPFSTVEMCEWFQAGYFTMTLLVKRGCDE
GFQPLGDVIKMWGRVPFSPGPSPPPLLSNMDQEVFKKQLEQVASAALYQQQLQRRYQHMN
SSSGGSGSSSGSSSRCGESGMMPAMNRSMSVPDTGPMWDMHTSASQQSGGEASLWDLTIG
NLPQGLSLEQLQQKLQQERREAELRAKREEEDRKRREEKRRQQQEEQKRREEEEEIFHRK
QQCRQQQELLMKLLQQSQQQQQPVGSVGAQSQGPCWNSAQPKPPKTSLNLLEMETERLLK
QQQRAQQQQQQQQRERQQQQQQHAGLTMGQWSDGGVGGMWGAGGLEGKVTASGGGGGGGG
GGGSSGGMGLWDEAVKNQSSHRSMGLKNSRSSPSLSEQYMMRRKQTEDEEKLLRLLQGIK
PQPQDGFTTWSEQMLHALNTNANNSSSSQEVATIVAYLKEVESPYEVHDFIRAYLGDTAE
AKEFAKQFLERRAKQKANQQRQQQQQQQQLSKELSGLNMNFPLQSMFQASHSGKSSVYDT
QGSKMKKKPNMMLHSDPSILGYSFLGAGERMILGEMETVEDY
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgactgcagagtcccttaacttcggtccagaatggctccgtgcactatctcgagggggg
agtgtgacctctcctcctcaatcccccgccatgccaaagtccaagctggccgactatcgc
tacggccgcgaggagatgctagcactttatatcaaagataataaggttccagatcagctg
caggataaggagtttggcccggtcctgcaggaccaacctctgcagcctctagctctggag
cctctgactgaggaggagcaggtagaagattggctatcgttgaggaacttttccatgtct
gtgaacagctctgctgtgctgaggctcatggggaaagggggcggggcccctccgatgggt
gtggcccgtggcagagggactgttcgaggaggaggaggaagaggaaggggaagaggagag
ggcggattctaccaaagaggtccagaggagggcgaggtgggctttggccgcagcagagag
atcaatcgcagccagagctgggatgaccgaggagagcggcgatttgagaagcccctgcgg
agagaaggggtgcgggtgggcttcgaggaaggggcggccgtagtgccacggaaagactac
tcgcgctctgacagcgacaactggcgcacgctgagggaggagcagcaggaggaggaggaa
gcggcagcagcagcggcggcggcggcagcagcagcaggaggagtagctgcagcagcacca
gcagcagcagcatcagctggaacaactgagccaggttcaagctggaggaccatgggaggg
agacatgatgacgggggccctcgctcggccggatggcgcgatcacactggggagggccgg
cgtaagaagtttgactttgacttcgacttcggggaggggggccggcggcgcaacatggac
aacgacgggctccctgagtggtgcactgacgaggaggacggcgagatgggtaccttcgac
tcgtccggagccttcatgtgcatcaagaagaacttgcgggaccccatccctgaggaccag
gagtttgagtttgaggctctggaggaggagaacggtctggagagtgctggagagggagaa
gatggtgggctggtgatgctgactgtaagtgaggtggagatgatgtctatgactggacct
tcgttttcctcgccccctgccctctctgcccctccaccacctcagtctcagcccccctcc
accaatacagagcctgcatcctctgctgcagcaccgcccacaaacaccactcgagagcct
gctgaagataaggcaccaccagggggcatcgctcggctgagcaccaactcctcccagagt
gtctcctctcccccttcatctgccgctgcaagagcagacctcccaccagcaggtggagac
aatgaggaggaggagcgcatgaagcacttgcagcaggaggcagagaagatggtggcgtcc
cttcaggacacgtccttggaggaggagcgtttcacacaggccctgcaggagagccacggt
gtgggcatgggtgtggccgtgggtgctggggcgggagctagcgcctccacgcacacacac
ccccacacgcaccagacgggggcctcggcgcattcccattcccacccccacccggccaca
tcgcactccctgtcgtacccggccagcgcactcccgctctctcacgaggcagccatgaag
tggttctacaaagacccccaagcagagatccaaggcccattctccacagtggagatgtgt
gagtggttccaggcgggctacttcaccatgaccctgctggtcaagcggggctgtgacgag
ggcttccagcccctgggcgacgtcatcaagatgtgggggcgcgtgcctttctcccccggg
ccctccccaccacccctgctgagcaacatggaccaggaagtatttaagaagcagcttgag
caggtggcctctgcagccttgtaccagcagcaactccagaggagataccagcatatgaac
agcagcagtggcggaagcggcagcagcagtggcagcagcagcaggtgtggggagtccggc
atgatgccagctatgaacaggtccatgtctgtgccggacaccggacctatgtgggatatg
catacctcagcttcacagcagtcaggcggtgaagccagtctgtgggacttaaccataggc
aacttacctcaggggctaagtctggagcagctgcagcagaagcttcagcaggagcgtcgt
gaagctgaactcagggctaagagggaggaggaggacaggaaacggagggaggagaagaga
aggcagcagcaggaggagcagaagaggagagaggaggaggaggaaattttccaccgcaaa
cagcagtgtcgtcagcagcaggagctgctcatgaagctgctccagcagagccagcagcag
cagcagccggtggggagcgtgggggcccagtcacagggtccctgctggaactcagcccag
cccaagccccctaagacctccctcaacctgctggagatggagaccgagaggctgctgaag
cagcagcagagggcccagcaacagcagcagcagcagcagagagagcggcagcagcagcag
cagcagcatgctgggctgacgatgggccagtggagtgatggtggcgtgggggggatgtgg
ggcgctgggggtctggaggggaaggtgacagccagcggaggtggtggtggtggtggtggt
gggggcggcagctctggagggatgggcctgtgggacgaggccgtgaagaaccagagcagc
caccgtagcatgggcctcaagaacagccgcagcagcccctcacttagcgagcagtacatg
atgcggcggaagcaaacggaggatgaggagaagctgctgcgtctgctgcagggcatcaag
ccgcagcctcaggacggcttcaccacctggagcgagcagatgctgcacgcgctcaacacc
aacgccaacaactcctcctcctctcaggaagtggccaccatcgtggcgtatcttaaggag
gtggagtcgccttacgaggtgcacgacttcatccgcgcctacctgggggacactgcggaa
gccaaagagttcgccaagcagttcctggagcgtcgtgccaaacagaaagctaaccagcag
aggcagcagcagcagcagcaacagcagctatcaaaggagctgtctggactgaacatgaac
ttccctctgcagtccatgttccaggcatcccatagtgggaaaagcagcgtgtacgacacc
caggggagcaagatgaagaagaagcccaacatgatgctccactctgaccccagcattcta
ggctactcattcttgggtgctggggagcgaatgatcctgggcgagatggaaaccgtggag
gattactaa
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integrated database retrieval system
