Clupea harengus (Atlantic herring): 105902415
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Entry
105902415 CDS
T09045
Symbol
jmy
Name
(RefSeq) junction-mediating and -regulatory protein isoform X1
KO
K24045
junction-mediating and -regulatory protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105902415 (jmy)
Membrane trafficking [BR:
char04131
]
Autophagy
Other autophagy associated proteins
Others
105902415 (jmy)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JMY
WHAMM-JMY_N
WH2
Seadorna_VP6
Motif
Other DBs
NCBI-GeneID:
105902415
NCBI-ProteinID:
XP_031433195
Ensembl:
ENSCHAG00000008365
UniProt:
A0A6P8GDW2
LinkDB
All DBs
Position
12:407588..431720
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AA seq
909 aa
AA seq
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MSFAMEDSLESDWVSVRPNVFDEKEKHKFVFIVAWNDIEGKFAVTCHNRTIQKRTVVRES
LVEAAESEFVSLKVAVQTKKTEDREKTSPKSLNKENALKSPPADRTEMCVLTTLGERGLN
ESHTKEKTVETRHTSQTKVRKPGDNAKVSDIEVLDTPTLMGETRSPADDAEGLDDLYSFV
RQDFSWAGLFSFQDMSAVHLQLCAVNSDLEPCLPPFPEEHSGMWTVLFGVPELSQRETET
LCYQLQVYLGHSLDTCGWKILSQVLFADSGDAEEYYESLSELRQTGYEDALQRAKKRLHE
LLERQRCMESMVELLDLYSQQDEAYGDLVEATTELYHYLLQPFRDMRELAMLRRQQIKIS
LETEFLGPRRVEGLKHEDEDWQKKAHTAALSIQDLTVKYFETTARAQKLMHERMKLDQRK
FGKATWSAAVDRMEKLQYAVSKETLQLMRAKEICLEQRKHGLCEEMQALQDGEDAMRHLD
NLESLYYELQLQLYEIQFEILKYEELLLTAQLHSLRRQMTERQDEVVYYDAYESPDAMQA
TDDCAPPGPPTREEVTRLQQKTRQLEARRGRITAKKAYLRNKKEICVINHNQKIQQHNRD
GGSSGGSQFGHCQDKEEEEVRNSRVRQERQKTLDRLRSFKQRYPGQVTLKSQRLRLAHNR
KKCGATLPQPQPPTEQQAQMKTQAASVQTEDCGSSTPLTEGSAGSTGFLSLTAAGAAGSK
PLLSAPCSLPPNLAPPPPPPPPPPPPFCDDEGRQGPSDAVGPKQQQPSAGSAPSPLGPFS
ARFFDSSQLLSARRKLRKTTSLESSQWRRAASSPMDEVLASLKRGSFHLRKAELRVLAPD
PDTDDSFNILAQIRRGVKLKKVPDGGRVPPADSCDPLTRSIHEALRRIKEASPESESEDE
GPPCTDWEC
NT seq
2730 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcgccatggaagattctttggagtccgactgggtctctgtgcgcccaaatgtt
tttgatgaaaaggaaaaacacaaatttgtttttattgtcgcatggaatgatattgaagga
aagtttgctgttacatgccacaaccgaacaatccagaagagaactgtggtcagagaatct
cttgttgaagctgccgaaagtgaattcgtatccctgaaggttgccgtgcagactaagaaa
acggaagatagagagaagacttcacccaaaagtcttaacaaggagaatgccctcaagagt
cccccagcagaccgaacggaaatgtgcgttctcacgactttaggggagaggggactaaat
gagagtcatactaaggagaaaactgtggaaacaaggcatactagtcagactaaagtaaga
aaacctggcgacaacgctaaggtttctgacattgaagtccttgatacacccaccctgatg
ggtgagacccggtctccagctgacgatgcagaaggtttggatgatttatacagttttgtc
cgacaggatttcagctgggccggcttgttctcatttcaagacatgagcgccgttcacctc
cagctctgtgcggtcaactctgacctggaaccgtgtctacccccgtttcctgaggagcat
tcaggaatgtggacggtgttgttcggggtcccagagctctctcagcgagagacagagacg
ctgtgctaccagctgcaagtctacctaggtcattccctggacacctgtgggtggaagatt
ctctcacaggtgctgttcgcggatagtggagacgctgaagagtactatgagagtttgagt
gagctccgtcaaacgggctacgaggatgctcttcagagagccaagaaacgcttgcatgag
ctgttagagaggcagcgctgcatggagagcatggtggagctgctggatctgtactcgcag
caggacgaggcgtacggagacctggtggaggccaccactgagctgtaccactacctgctc
caacccttcagggacatgagggagctggccatgctgcggcgacagcagatcaagatctcc
cttgagacggagttcctgggcccacggcgtgtggagggactgaagcatgaggatgaagac
tggcagaagaaggctcacactgctgcgctctccattcaggacctcactgtcaagtacttt
gagactacagctcgagcacagaaattgatgcacgagcgcatgaagctggaccaacgcaag
tttggcaaagctacgtggagcgcagcggtggatcgcatggagaagctccagtacgccgtc
tccaaggagacgctgcagctgatgcgggccaaagagatatgtctggagcagaggaagcat
ggcctatgtgaagagatgcaggctcttcaggacggggaagatgcaatgagacacctagac
aacctggagtcactttactatgagctgcagctgcagctttatgagattcagtttgagatc
ctgaagtatgaggagctgctactgactgcacagctccatagtctgcgtcgacagatgaca
gagaggcaggatgaggtggtgtactatgatgcgtatgagagtccagacgccatgcaggcc
actgatgactgtgccccccctggcccccccaccagagaagaggtgaccagacttcagcag
aagacccggcagctggaggctcgaaggggccgcatcaccgctaaaaaagcctatctcaga
aacaagaaggaaatctgtgttatcaatcacaaccagaagatccagcagcacaacagagac
ggaggcagcagcggcggctcacagtttggccactgccaggataaagaggaggaggaggtc
aggaactccagagttcgacaggagaggcagaagaccctggaccgcttgcgcagcttcaag
cagcggtatcctggtcaggtgaccctgaagtcccagaggttgcgactcgcccacaatagg
aagaagtgcggtgccaccctgccccagccccagccccccacggagcagcaggcccagatg
aagacccaggcggccagcgtgcagacggaggactgtggctcctccacgcccctcacagaa
gggtctgcaggcagcacaggcttcctctccctaactgctgcaggcgctgctggatctaag
ccactcctctctgccccgtgctccttgccaccaaacttggctcctccccctcccccgcca
cccccccctccaccacccttctgtgatgatgagggccgtcaggggccctcagatgccgtg
ggccccaagcagcagcagccctcagcaggcagcgctccatctccgcttggacctttcagc
gcacgcttttttgacagcagtcaacttctcagtgcccgccggaaactcaggaagaccact
tctctggagtcgtcccagtggagaagagcagcaagctcacctatggacgaggtcctggcg
tccctaaaacgtggcagcttccacctccggaaggcggagctgcgtgtgttggcccccgac
ccagacacggacgacagcttcaacatcctggcccagatccgcagaggtgtgaagctgaag
aaggtgcctgacgggggccgcgtcccgcccgccgactcctgtgaccccctgacccggagc
atccacgaggccctgcgccgcatcaaagaagcctcccctgagtccgagtccgaggacgag
gggcctccctgcacagactgggagtgctag
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