KEGG   Clupea harengus (Atlantic herring): 105902424
Entry
105902424         CDS       T09045                                 
Name
(RefSeq) homer protein homolog 1
  KO
K15010  homer
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04068  FoxO signaling pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04068 FoxO signaling pathway
    105902424
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:char03037]
    105902424
Cilium and associated proteins [BR:char03037]
 Other cilia and associated proteins
  Stereociliary proteins
   105902424
SSDB
Motif
Pfam: WH1 CCDC170_1st GAS T4SS_LegC2C7 CCDC172 CCDC170_2nd SPC25_N LEKR1 ROS_MUCR EVH1_PP4R3 DMPK_coil Rab11-FIP3 DUF1664 Phage_p2_ORF12 CCDC192 FKBP15 BLOC1_2 HMMR_N DUF4164 Ddi2_HDD PKcGMP_CC
Other DBs
NCBI-GeneID: 105902424
NCBI-ProteinID: XP_012685463
Ensembl: ENSCHAG00000008500
UniProt: A0A6P3W061
LinkDB
Position
12:complement(443404..494146)
AA seq 362 aa
MGEQPIFSTRAHVFQIDPNTKKNWVPTSKHAVTVSYFYDSTRNVYRIISLDGSKAIINST
ITPNMTFTKTSQKFGQWADSRANTVYGLGFSSEGQLAKFAEKFAEFKEAARLAKEKSQEK
MDLATSPSQVTLPSPTQESATCDLQSPLTPESINGTEDERLISDATQNTDLRAETNSMLF
PHSGATITKHWEAELAALKGNNAKLTAALLESTANVKQWKQQLAAYQEEAERLHKRVTEL
ECVSSQASGFKIQKTELNQTIEELEATLKAKEEELEELKEKVQHANHLQTHRDSVSEKLQ
ETELRNQDLEGQLRELEQRLESSQLEQEDFRKSLRSLLELLDGKIFELTELRDSLAKLIE
DS
NT seq 1089 nt   +upstreamnt  +downstreamnt
atgggagaacagcccatcttcagcacacgggctcatgtctttcagatcgatcccaacacc
aagaagaactgggtaccgaccagcaagcatgcagtcaccgtctcatacttctatgacagc
acacgcaatgtctaccgcatcatcagcctcgatggctccaaggccatcattaacagtacc
atcacccccaacatgactttcaccaaaacatctcagaagtttggccaatgggctgacagt
cgagccaacaccgtctatggccttgggttctcctcagagggtcaactggctaagtttgca
gagaaatttgcagagtttaaggaggctgcacgtctggcgaaagagaagtcccaagagaag
atggacctggctacctctccttcacaagtaactcttccctctcccacacaggaatcagca
acatgtgacctccagtcacctctcacgccagagagcattaacggcactgaagatgagagg
ctgatttctgatgcaacccagaacacagacctgcgggcagagaccaattcaatgctcttc
ccccacagcggcgccaccatcaccaagcactgggaggcggagctggcggcgctgaagggg
aacaacgccaagctgacggcagcactgctggagtccaccgccaacgtcaagcaatggaag
cagcagctggcagcctaccaggaggaggcggagcgattgcacaagagggttacggagctg
gagtgtgtgagcagccaagccagtggttttaagatccaaaagacagagctcaatcagact
atagaggagctggaagccacgctcaaagccaaggaagaggaactggaggagctaaaggag
aaagtccaacatgccaatcacctgcagacacacagggattcagtttcggagaaacttcag
gagactgagttacgtaatcaagacctggagggacaacttcgggaactggagcagcgtttg
gagagcagtcagctggagcaggaggacttcaggaagagcttgcgttctctactggagctg
ctggatggcaagatctttgagctgaccgaactgcgtgactccctcgccaagctcatcgag
gacagctag

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