Clupea harengus (Atlantic herring): 105902476
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Entry
105902476 CDS
T09045
Name
(RefSeq) globoside alpha-1,3-N-acetylgalactosaminyltransferase 1
KO
K00722
globoside alpha-N-acetylgalactosaminyltransferase [EC:
2.4.1.88
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00603
Glycosphingolipid biosynthesis - globo and isoglobo series
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00603 Glycosphingolipid biosynthesis - globo and isoglobo series
105902476
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105902476
Enzymes [BR:
char01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.88 globoside alpha-N-acetylgalactosaminyltransferase
105902476
Glycosyltransferases [BR:
char01003
]
Glycan extension
FORS blood group (Forssman antigen)
105902476
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_transf_6
Motif
Other DBs
NCBI-GeneID:
105902476
NCBI-ProteinID:
XP_012685518
UniProt:
A0A6P3VZK6
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All DBs
Position
12:complement(20091130..20095597)
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AA seq
337 aa
AA seq
DB search
MAVFPTIRLPPGLNRLTWRQLFLLCVLLSGLMYFLRLRRPVTIRPVSGSRTLERGHDLSH
RPTRTSWGAPLVWGDSEVSERQRAAFAQRSFRVGLMVLAVGRYTHYLQHFLQSAETHFLP
GLPVNYYILTDNPEKLVPPPELGEERSLRVVPVAEMPGWEHLVRRRMDLLASTIDNQVQQ
EVDYVFCADVDQEFASQVGTEILGTLVATLDPQHTSMPIYTYPYERSPDSRACVLDEEGD
YYYTSELYGGLCSEVMALTKVCSQLILQDHALGVEAQGLEESYLNRYLIDRRPTCVLSPE
YSWWDSPVTPEVPQKRVISLGRQCASLRDQGKSALNC
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggcagtattcccaactatcaggcttcccccagggttgaaccggctgacctggagacaa
ctcttcctgctctgcgtgctgctctctgggcttatgtatttcctgaggttgaggcgacca
gtaaccatcaggcctgtctctgggtcccgcaccttagaacgaggtcacgacctctcgcac
cgccctacaaggacatcttggggggcgcctctggtgtggggagacagcgaggtctcggag
cgtcagagggcggcgtttgcacagcgctcgttccgtgtggggttgatggtgctcgccgtg
ggccgctacacacactacctccagcatttcctccaatcggccgagacacacttcctgccg
gggctgcccgtcaactactacatcctgacggacaaccccgaaaagctcgtcccgcccccc
gagctgggcgaggaacgcagcctgcgggttgtgcccgtggctgagatgccaggctgggag
cacttggtgcgtcggcgcatggatctcctggcctccaccatcgacaaccaggtccagcag
gaggtggactatgtcttctgtgccgacgtggaccaagagttcgccagccaggtgggcacg
gagatccttgggacgctggtagccacgctggacccacagcacacttccatgcccatctac
acttacccgtacgagaggagcccagactcgcgggcttgtgtcctcgacgaggagggcgac
tactactacacctcggagctctacgggggcctgtgctcagaggtaatggccctgacaaag
gtctgctcccagctcatcctccaagaccacgccctgggcgtagaggctcaggggctggag
gagagctatctgaaccgctacctgattgacaggaggcctacctgcgtgctctcgcctgag
tatagctggtgggattccccagtgacgcctgaggtccctcagaagagggtcatctcgctg
gggaggcaatgcgcctcactcagggaccaggggaagagcgctctcaactgctaa
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