Clupea harengus (Atlantic herring): 105902480
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Entry
105902480 CDS
T09045
Symbol
dnai1.2
Name
(RefSeq) dynein, axonemal, intermediate chain 1, paralog 2 isoform X2
KO
K10409
dynein axonemal intermediate chain 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04814 Motor proteins
105902480 (dnai1.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
105902480 (dnai1.2)
04812 Cytoskeleton proteins [BR:
char04812
]
105902480 (dnai1.2)
Cilium and associated proteins [BR:
char03037
]
Motile cilia and associated proteins
Dynein arm
105902480 (dnai1.2)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
105902480 (dnai1.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40
WD40_CDC20-Fz
Beta-prop_RIG_2nd
Beta-prop_EIPR1
WD40_WDHD1_1st
Beta-prop_HPS5
EIF3I
WDR55
WD40_RFWD3
Beta-prop_RSE1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_ELP1_2nd
Beta-prop_TEP1_2nd
Motif
Other DBs
NCBI-GeneID:
105902480
NCBI-ProteinID:
XP_031433040
Ensembl:
ENSCHAG00000027125
UniProt:
A0A6P8G9C4
LinkDB
All DBs
Position
12:complement(19382470..19416677)
Genome browser
AA seq
696 aa
AA seq
DB search
MPVPQKTGAAKAKQGPNSLPKATASKGTKAASKKKDDEDGADLGEGGEDWTQGKTLVKPP
DQLDLTEAELKEEFTRILTANNPHAPQNIVRYSFKERSYKAVSSVDQLAVHFVLDGNLLH
RDSDEARRQRAKQGLPEENPMDAAVETDEEKTETPAAEAEEEAGEEGGAEERPDSVEVKG
GGQKAANQFNFSERASQTLNNPLRERECQTEPPPCANFSATANQWEIYDAYLEELHKQEK
IKEKQKALPTKKDEDKGKKKMMMVEMQSDDISKVSKAAKIVERMVNQNTFDDIAQDFKYF
EDASDEFRDQEGTLLPLWKFQYDKAKRLAVTALCWNENNRDLFAVGLGSYDFTKQGRGML
LFYSLKNPTYPECTYHTTTGLMCLDIHPKLPHLVAVGFYDGCVGVYSLKEEGTQPIYKST
AKSGKHTDPVWQVRWQGDDMDHNHNFFSVSSDGRVVSWTLVKNELVYTDIIKLSLEGSPS
DGTEGMQLPTMACGTSFDFHKQIDYLFLVGTEEGKIHKCSKAYSSQFLQTYDAHNMAVDA
VKWNHFHPKVFISCSSDWTVKIWDHTIDTPMFTFDLNSAVGDVAWSPYSSTVFAAVTSDG
RVHVFDLSINKYEAICQQPVVAKKKTKLTHIQFNPEHPIVIVGDDRGYVNSLKLSPNLRK
KPKEKKGQETPKGPEVEIAKMEKLLSLLREPESNNS
NT seq
2091 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgccacaaaaaactggggctgccaaagccaaacaggggccgaattccttgccc
aaggccactgcttcaaagggaaccaaagcggcgagcaagaaaaaggatgatgaggatggt
gcagacttgggtgaagggggtgaggactggacacaagggaaaactttggtgaaacccccg
gaccagctggacctgactgaagcagagctgaaagaggaattcacgaggatcctgacagcc
aacaatcctcacgctccacagaatattgtccgctacagcttcaaagagcgctcttataag
gccgtcagtagcgttgaccaactggcagttcactttgtcctggacggaaatcttcttcat
agggactccgatgaggctcgcagacagagggccaagcaaggcctcccagaagaaaatccc
atggatgctgcagtggagacagacgaggagaaaacagagactccggccgccgaagcagag
gaggaagcgggtgaggagggcggagcggaggagaggcccgacagcgtggaggtcaagggc
ggcggccagaaggcggccaaccagttcaacttcagcgagcgagcctcccagacgctcaac
aaccccctcagggagagagaatgtcagacggaaccccctccttgtgcaaacttctcagcc
acagccaatcagtgggagatctatgatgcttatttggaagagctgcataaacaagagaag
attaaggagaagcagaaagctctgcccacaaagaaagatgaggacaaaggcaagaagaag
atgatgatggtggaaatgcagagtgatgacatcagtaaagtgtcaaaggcggcaaagatt
gtggagcgcatggtcaaccagaacacatttgacgacatcgcccaggacttcaagtacttt
gaggacgcctcagacgagttccgggaccaggagggcaccctgctgccgctgtggaagttc
cagtacgacaaagccaagagactggctgtcactgccctctgctggaatgaaaataaccga
gacctgtttgctgtaggccttggctcgtatgattttactaaacagggccgaggcatgctc
ctgttctactccctaaagaaccccacctaccctgagtgcacctaccacaccaccaccggc
ctcatgtgcctggacatccaccccaagctgccacatctggtggccgtaggcttctacgac
ggctgcgtgggcgtctacagcctgaaggaggagggcacccagcccatctacaagagcact
gctaagtctggcaaacacacagatcctgtttggcaggtgcgctggcagggcgatgacatg
gaccacaatcacaactttttctctgtgtcgtctgatggcagagtggtgtcctggaccctg
gtcaagaatgagctggtgtatacagacatcattaagctgtctttagagggttcgccatca
gatgggacagaaggcatgcagctgcctaccatggcatgtggcacatcgtttgacttccat
aagcagatagactacctattcctggttggcacagaggaggggaagatccacaagtgctct
aaagcatactctagccagttcctgcagacttatgatgcccacaacatggctgtggatgcg
gtcaagtggaaccacttccaccccaaagtcttcatctcctgcagctctgactggaccgtc
aagatctgggaccacaccattgacacacccatgttcacctttgacctgaactctgcggtg
ggggacgtggcctggtctccgtactcctcgacggtgttcgccgctgtcacctcagacgga
agggtccacgtttttgacctgagcatcaacaaatatgaagccatctgccagcagcctgtg
gtggccaagaagaagaccaagctgacacacatccagttcaaccctgagcatcccatcgtc
atcgtcggggacgaccgtggctacgtcaacagcctcaagctctcacccaatcttcgcaag
aagccaaaggagaagaagggccaggagacgcccaaaggccccgaggtggagatcgccaag
atggagaagctcctgagtttgctgagggagccggagagcaacaacagttaa
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