Clupea harengus (Atlantic herring): 105902481
Help
Entry
105902481 CDS
T09045
Symbol
vav2
Name
(RefSeq) guanine nucleotide exchange factor VAV2 isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04510
Focal adhesion
char04517
IgSF CAM signaling
char04519
Cadherin signaling
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
105902481 (vav2)
04519 Cadherin signaling
105902481 (vav2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
105902481 (vav2)
09142 Cell motility
04810 Regulation of actin cytoskeleton
105902481 (vav2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_2
CAMSAP_CH
SH3_1
CH
SH2
SH3_9
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
DUF7145
SH2_2
PH_10
C1_2
CDC24
DH_Alsin
Motif
Other DBs
NCBI-GeneID:
105902481
NCBI-ProteinID:
XP_031433603
Ensembl:
ENSCHAG00000026325
UniProt:
A0A6P8G0P9
LinkDB
All DBs
Position
12:19143856..19363458
Genome browser
AA seq
890 aa
AA seq
DB search
MEEWRQCGRWLIDCKVLPLNHRVVWPSAVVFDLAQALRDGVLLCQMLHNLSPGSVDLKQI
NFRPQMSQFLCLKNIRTFLKVCHDKFGLRNSELFDPFDLFDVRDFGKVISALSRISHNSI
AQIKGIRPFPSEDTTALNEDDIYRSLEELADEHDVGEDDIYDCVPCDDDGDDIYEDIIKV
EVRQPMIRYMQKMGMSEDDKRNCCLVEIQETEAKYYKTLEDIDKNYMIPLKQVLSSQDME
AIFVNLEDVIKVHAALLKAIDLNMMNGGSGLGKIFLDFKERLLIYGQYCSHMEHAQKTLD
DLIVTREDVKMKVEECTMKVQEGKFKLQDLLVVPMQRVLKYHLLLKELLSHSADRPERQQ
LKEALEAMQDLAMYINEVKRDNETLKKISEFQSSIENLVCFFPHQHVKLEEYGRPKIDGE
LKVSTAVNRTKQDRYIFLFDKVVIVCKRKGYNYELKEIIELQYYKMSDDPMNNRDMKKSS
GKMWSYGFYLIHLQGKQGFQFFSKTEDTKRKWMEQFEMAMSNIKPERATANQHNFEMHTF
EKNTNCRACKMLLRGIFYQGYFCSHCGTGAHKECLEVITICKINPHDSEPGLPPSLGPKM
VALRNYHGTPSPPGKPPLTFQTGDVIELLKGDPDTTWWEGRLIQGLKTGYFPSSSVKPCL
DPKPFQGFPSRQTSRDVDYTVYPWFAGNMERQQADNLLKSHSSGTYLIRERTAEAERFAI
SIKFNDEVKHIKVIEKDSWIHITEAKKFESLLELVEYYQSHSLKESFKLLDTTLRYPYKS
RDRSSSRSLTRSPAASSASYNFSFLSPQGLNFTSTQSPAPFWSVFTPRVVSSAVARYNFA
ARDMRELSLREGDVVKIYSKIGGDQGWWKGEANGRIGWFPSTYVDEEGVQ
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atggaggaatggagacaatgcggccggtggctgatagactgcaaggttttgcccctgaat
caccgggttgtgtggccctcggcggtcgtgttcgatttggctcaggcgctccgggatggc
gtgcttttgtgccaaatgttgcacaatttgtcacctggctcagtggacctgaagcagata
aacttcagaccacagatgtctcagtttctgtgtctgaaaaacatccggaccttcctgaag
gtgtgccacgacaagttcgggctgcggaacagtgagctgttcgacccctttgacctcttt
gacgtccgggacttcggcaaggtgatctcagcgctgtccagaatctcccataacagcatc
gcacagatcaaaggcatcaggccctttccctcagaggacactactgcgctgaatgaagat
gatatctacaggagccttgaggagctggctgatgagcacgacgtgggcgaggatgacatc
tatgactgcgtcccctgcgatgacgacggcgatgacatctacgaggacatcatcaaggtg
gaagtcagacagcctatgatccgatacatgcagaaaatgggcatgtcggaggatgacaag
cgcaactgctgcctggtggagatccaggagacggaggccaaatactacaaaacactggag
gacattgacaagaactacatgatcccactgaagcaggtgctcagctctcaggacatggaa
gctatcttcgtcaacttagaggacgtgatcaaggttcacgctgcactgctgaaggccatc
gacctcaacatgatgaacgggggcagtggcctgggcaagattttcctggacttcaaggaa
aggctgctgatctatggccagtactgcagccacatggagcatgcccagaagaccctggat
gacctcatcgtcacacgagaggatgtcaagatgaaagtcgaggagtgcaccatgaaggtc
caggaaggcaagttcaagctgcaggatctgctggtggtgcccatgcagagagttctcaaa
taccacttactgctgaaggagttgctgagtcactcggcagaccggccagagagacaacag
ctgaaggaggcgctcgaggccatgcaggacctggccatgtacattaacgaggtgaagaga
gacaacgagacgctgaagaagatcagcgagttccagagctccatcgagaacttggtgtgt
tttttccctcatcagcatgtgaagctggaggagtacggccggccaaagattgacggagag
ttgaaggtgtcgacggccgtcaaccgcaccaaacaggacaggtacatcttcctgtttgac
aaggtggtgatagtctgcaagcgcaaaggctacaactacgagctgaaggagatcatcgag
ctgcagtactacaagatgtctgacgatcccatgaacaacagggacatgaagaagtcgagt
gggaaaatgtggtcgtacggcttctacctcatacacctgcaggggaaacagggcttccag
ttcttctccaagacagaggacaccaagaggaagtggatggaacagtttgagatggccatg
tccaacatcaaaccggagcgagccacggccaaccagcacaacttcgagatgcacacattc
gagaagaacacaaactgccgagcctgcaagatgctgctgaggggcatcttctaccagggc
tacttctgctcgcactgtgggaccggagcgcacaaggagtgcctggaggtcatcaccatc
tgcaaaatcaatccacacgattcggagcctgggctgccgccttctttgggcccgaaaatg
gtggccctcaggaactaccacggtacgccctctcccccagggaaaccccccctcaccttc
cagaccggtgatgtcattgagttgctgaagggagacccggacaccacctggtgggagggg
cggctcattcaaggcctgaagactggttactttcccagctccagtgtgaagccctgtcta
gatcccaagcctttccagggcttccccagtcggcagacatcaagagatgtggattacacc
gtctacccctggtttgctgggaacatggagcggcagcaggctgacaacctcctcaaatcc
cacagcagtggcacctacctgatcagggagaggaccgccgaggccgagagattcgccatt
agcatcaagttcaatgatgaagtaaagcacattaaggtgatcgagaaagacagctggatt
cacatcaccgaagccaaaaagtttgagagcctcttggagttggtggagtactaccagtcc
cactccctgaaggagagcttcaagctgctggacactacactgcgctatccctacaaatca
cgtgaccgctcatcatcgcgctccctcacacgctctccagcagcctcatctgcttcctac
aacttctccttcctcagtcctcagggcctcaacttcacttctactcagagccctgccccc
ttctggtcagtgttcacgccgcgcgtggtgagttcggcggtggcgcggtacaactttgcg
gcgcgggacatgagggagctgtcgctgagagaaggagacgtggtgaagatctacagcaag
atcggaggagaccagggctggtggaaaggagaagccaacggcaggattggctggttcccc
tccacgtatgttgacgaagaaggtgtccagtga
DBGET
integrated database retrieval system
