Clupea harengus (Atlantic herring): 105902490
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Entry
105902490 CDS
T09045
Name
(RefSeq) RNA-binding protein Musashi homolog 1 isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
105902490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
105902490
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
105902490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
NID
PHM7_cyt
Motif
Other DBs
NCBI-GeneID:
105902490
NCBI-ProteinID:
XP_012685530
Ensembl:
ENSCHAG00000006959
UniProt:
A0A6P3VZL3
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All DBs
Position
12:complement(21476793..21498267)
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AA seq
355 aa
AA seq
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MDTEGSQSSLSSADSPHDPCKMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRS
RGFGFVTYVDQTGVDKVLAQNRHELDSKTIDPKVAFPRRAQPKMVTRTKKIFVGGLSVNT
TIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINNKMVE
CKKAQPKEVMSPTGSARGRSRVMPYGMDAFMLGIGMLGYPGFQTATYASRSYAGIAPGYT
YQFPEFHLERTPLLTSSHPSELAAIPLTAYGPMAAAAAAAAVVRGSTPSRGFLGTSSPGP
MADLYAAANQDSGVSSYMSAASPAPSSGFGHGLGVWQQRLTEGPMIATAFTNGYH
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atggacacggaagggagccaaagcagcctgtcctctgcggactccccgcacgacccttgc
aaaatgttcatcgggggtctcagttggcagacaacacaagagggactgaaggaatacttt
tgtaaatttggagaggtgaaggagtgtatggtgatgcgggatccggttacgaagagatcg
aggggattcggttttgtcacatatgttgaccaaaccggcgtggataaagttttggcgcag
aacagacatgaactggactcgaaaacaattgacccaaaggtggcatttccacgtcgagct
cagcccaagatggtcaccaggacaaagaagatatttgtcggcggtctctctgttaacacc
accatcgaggacgtgaagcagtattttgaccagtttgggaaggtcgatgacgccatgctc
atgtttgacaaaaccaccaacagacacagaggctttgggtttgtcacctttgagaatgaa
gatgtggtggagaaagtctgtgagatccacttccatgagatcaacaacaagatggtggag
tgtaagaaggcccagccgaaggaggtcatgtcaccgacgggctcggctcgagggcgctcc
agggtgatgccctacggcatggatgccttcatgctgggcatcggcatgctgggttaccca
ggcttccagaccgccacctatgctagtcgcagttacgctggtatcgcacctggatacacc
taccagttccctgaattccatttagagaggacccccctcctgacatcatcccacccctct
gaactcgcagccattccactgacggcgtatgggccaatggcagccgcagcagctgcagct
gcagtggtcagaggctcgacaccctcgcgtgggttcctgggcaccagcagccctggacca
atggctgacctgtatgcagcagccaatcaggattcaggagtgagcagctacatgagcgca
gccagccctgctcctagttcaggctttgggcatggactaggggtttggcaacaaagactc
acagaaggtcctatgatagcgacggcctttactaacggctaccactga
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