Clupea harengus (Atlantic herring): 105902545
Help
Entry
105902545 CDS
T09045
Name
(RefSeq) myotubularin-related protein 3 isoform X1
KO
K18082
myotubularin-related protein 3/4 [EC:
3.1.3.48
3.1.3.64
3.1.3.95
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00562
Inositol phosphate metabolism
char01100
Metabolic pathways
char04070
Phosphatidylinositol signaling system
char04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
105902545
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
105902545
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
105902545
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105902545
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
105902545
3.1.3.64 phosphatidylinositol-3-phosphatase
105902545
3.1.3.95 phosphatidylinositol-3,5-bisphosphate 3-phosphatase
105902545
Protein phosphatases and associated proteins [BR:
char01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Dual specificity phosphatases)
Myotubularins
105902545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myotub-related
FYVE
DSPc
Y_phosphatase
Y_phosphatase3
PTP-NADK
Motif
Other DBs
NCBI-GeneID:
105902545
NCBI-ProteinID:
XP_031433385
Ensembl:
ENSCHAG00000007923
UniProt:
A0A6P8GEF1
LinkDB
All DBs
Position
12:complement(21699444..21713649)
Genome browser
AA seq
1124 aa
AA seq
DB search
MDEEDQQSPEAGRASLPLSRKTPVLEEDNLQVPFSELHEECVEYVGRAEVAIIAMSSYRL
HIKFKESVINVPLQLIESVECRDMFQLQVICKDCKVIRCQFAQAEQCQEWVKRLGAVARP
PPRLDQLFAFSFHAHTEEQQQPHSDICRAGDHVTSRFKNEVERMGFETHGTWRISEINRG
FRLCSSYPELLLVPAWVTDKELENVAAFRSWKRFPVVVYRHQSTGAVIGRCGQPEVSWWG
WRNAEDEQLVQAIAKACSSNGNALTPLSNGSCGHAHTNITNGNADTVVANGDVEAEAEPA
ATPPEKLLILDARSYAAAVANRAKGGGCECPEYYPNCEVVFMGMANIHSIRKSFQCLRSL
CAQVPDPANWLSALESTKWLQHLSLLLKAALLVVNAVDRDRRPVLVHCSDGWDRTPQIVA
LSKLLLDPFYRTVEGFQVLVETEWLDFGHKFGDRCGHGEKADDVNERCPVFLQWLDCVHQ
LHRQFPCSFQFNEAFLVKLAQHVYSCLFGTFLCNSGKEREENCVQQRTCSVWSLLRPTHR
AFRNILYSPHSETVLHPVCHVRNLMLWSGVYLASSSPSTPCEESCAPYPAHKASSEDTPN
GRLPKTRSVDDLTLACEGGPPPSRRSSDPNLRALEVAMATSPDDAESMNGLDHEASPSPE
QQDSETGLEERLDGEEPSDRAETSDEPIDDETEEAGTSQEAGLSMAEGVVAAQMEHILQE
AREEGGALSSAPLSEDISEDITPSTLSTPSPSEVSSAVPAQGPQDPITQLCEEMVEQALE
FANSEPTNTMPLPAGHIINGHCNGQSEEDGEPPSANPCAGHPEEQSPLETEEEAPAHPHT
PPQEPQTQPAFPVCPALPEPPRTLNGLHLPSHGALHPLSPSPAVCNGETHPTPNGSRRPL
SRQTSGTSPCGLLPPCRASGVVPRGAGAAAPPAGHMEEDGLSVHSDAVQVRLQQMEAGHQ
QQVENLKWQVQQLWSRLRVNGELPAELTSLPDGENNLEPVCLSRCSTEFFSEGSWEQVEQ
REPEVTRWYPDHLATHCYGCETKFWLAARKHHCSAREPVEEAWNCGNVFCASCCDQKVAV
PSQNLFIPNRVCKACYGHMRLTSVPPAVPPADLELEKPITASSN
NT seq
3375 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaggaccagcagagtccagaggcaggcagggccagcctgcccctctccagg
aagacccctgtgctggaggaagacaacctgcaggtccccttctcggagcttcatgaggag
tgtgtggagtatgtgggcagagcggaggttgccatcatcgccatgtccagctaccggctg
cacatcaagttcaaagagagtgtcatcaatgttcccctgcagctgatcgagagcgtggag
tgccgggacatgttccagctgcaggtcatctgcaaggactgcaaggtcatcaggtgtcag
tttgcacaggcggagcagtgccaggagtgggtcaagcgtctgggggccgtggctcgcccg
ccgccgcggctggaccagctcttcgccttctctttccacgctcacacggaggagcagcag
cagcctcacagtgacatctgcagagcaggtgaccatgtgacgtctcgcttcaagaacgag
gtggagcgcatgggatttgaaacgcacggcacatggaggatatctgaaatcaaccgcggc
ttcaggctctgctccagctacccggagctccttctggtgccagcgtgggtcaccgacaag
gagctggagaatgtggctgccttccgctcctggaagaggttccctgtggtggtatacagg
caccagagcacgggcgctgtgattggtcggtgcgggcagccggaggtgagctggtggggg
tggcggaacgcggaggatgagcagctggtgcaggccatcgccaaggcctgttcctccaat
ggcaacgcgctcaccccgcttagcaacggctcctgcggtcacgcacacaccaacatcaca
aatggcaatgcagataccgttgttgccaatggtgatgtggaggcggaggcggagccagca
gccacccctccagagaagctgctgatattggacgccaggtcatacgctgcggcagtagcc
aatcgggcgaaaggaggtggctgcgagtgtccagagtattaccccaactgtgaggtggtg
ttcatgggcatggccaacatccactccatcaggaagagcttccagtgcctgcgttcgctc
tgtgcccaggtgcctgacccagccaactggctgtctgctctggagagcactaaatggctg
cagcacttgtctctgctgctgaaggcggcgctgttggtggtgaacgcggtggaccgtgac
cgcaggcccgtgctggtgcactgctccgacggctgggaccgcacgccccagatcgtggcg
ctgtccaaactcctgctggatcccttttaccgcaccgtagagggcttccaggtgctggtg
gagacggagtggctggacttcggccacaagttcggcgaccgctgcggccacggcgagaag
gcggacgacgtgaacgagcgctgccccgtctttctgcagtggttggactgcgtgcaccag
ctgcataggcagttcccctgctccttccagttcaacgaggccttcctggtgaagttggcg
cagcacgtgtactcctgtctgtttgggacgttcctgtgcaacagtgggaaggagcgggag
gagaactgtgtgcagcagaggacctgctccgtgtggtcactgctgcgccccacgcaccga
gccttccggaacattctctactcaccacactccgagacggtgctgcatccagtatgccac
gtgcgcaacctgatgctgtggagcggcgtctacctggccagctcctccccctccacaccc
tgcgaggagtcatgtgctccttaccccgcccacaaagcgtcctctgaggacacgcccaac
ggcaggcttccgaagacgcgttctgttgatgacctgacattagcctgtgagggaggacct
ccacctagccgtcgctccagcgaccccaacctccgggccctggaggttgctatggcaaca
tcgccagatgatgctgagagtatgaacggtctggaccacgaggccagtcccagcccagag
cagcaggactctgagacgggactggaggagaggttagatggagaggagccgagtgaccgg
gcagagacgagcgacgagccaatcgacgacgagactgaggaggcggggacatcccaggag
gcgggcctgtccatggcggagggcgtggtcgcagctcagatggagcacatcctacaggaa
gcccgggaagagggcggggctttgtccagcgcccctctctccgaggacatcagtgaagac
atcactccctccaccctctccacaccctctccttccgaggtgtcctccgcagtgcctgca
cagggtcctcaggaccccatcacccaactctgcgaggagatggtcgagcaggctctagag
ttcgccaatagtgagccaaccaacaccatgcccttgcccgccggtcacataattaatggc
cactgcaacggccaatcagaggaggacggtgaacccccgtccgcaaacccttgtgctggg
caccctgaggagcagagcccccttgagacagaggaagaagctccagcacacccccacact
ccccctcaagagccccaaacacagcccgccttcccggtctgccctgcactgccggagcca
ccccggactctcaatggcctccacttgccttcccacggtgccttgcatcccctctccccc
tcccctgctgtgtgcaacggggagacccaccccacgcccaatggctcccgccggcccctc
agcaggcagacgtcaggaacctccccgtgcggcctccttcccccctgcagggcctcgggg
gtcgtacctcgcggagctggggctgcggctccccctgctggacacatggaggaggacggg
ctgagcgtgcacagcgacgcggtgcaggtgcgtctgcagcagatggaggcaggccaccag
cagcaggtggagaacctcaagtggcaggtgcagcaactgtggagccggctacgagtcaac
ggagagctgcccgctgagctgacgtctctcccagacggtgagaataatctggagccggtg
tgtctgtcacgctgcagcacggagttcttctccgagggcagctgggagcaggtggagcag
agggaaccggaggtcaccaggtggtatccagatcacttagcaacacactgctatggatgc
gagaccaagttctggctggcggctaggaaacaccactgcagtgccagagagcctgttgaa
gaagcctggaactgtgggaatgtgttctgcgctagctgctgtgaccagaaggtggcggtg
ccgagccagaacctgtttattcccaaccgcgtgtgcaaggcctgctacggacacatgcgt
ctgacttcagtgccccccgccgtgccccctgccgacctggagctggagaagccaatcaca
gccagctctaactaa
DBGET
integrated database retrieval system
