Clupea harengus (Atlantic herring): 105902582
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Entry
105902582 CDS
T09045
Name
(RefSeq) spermatid perinuclear RNA-binding protein
KO
K13200
spermatid perinuclear RNA-binding protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105902582
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105902582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DZF_C
DZF_N
dsrm
Dicer_dsRBD
Motif
Other DBs
NCBI-GeneID:
105902582
NCBI-ProteinID:
XP_031434110
Ensembl:
ENSCHAG00000020938
UniProt:
A0A6P8GGR3
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All DBs
Position
12:complement(16603498..16701141)
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AA seq
676 aa
AA seq
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MRSIRSFGNDDRHVMAKHSTIYPSSEELEAVQTLVSTVECALKHVSDLMDQTTQSQATNG
QDDDTDVSTDESAEGNTKEPGGGVLCGVIRIGLVAKGLLIKDDMDLELVLMCRKKPTETL
LRTVSDNLPQQIQKLTEEKYEVECCVPEAAILVHSTGEPKLRLKVTLTSPRMREESPADT
DADRVEPCEEPEVLDRERCLVALASLRHAKWFQARVNGLKSCVIILRVLRDMCNRVPAWE
PLKGWPLELICEKAIATCNRPLGAGEALRRVMECLASGILLPGGPGLHDPCEKEPKDTLA
SMTSLEAEAVTYSAQRALRLMAFGQIYKVLEMDALPSSKPSHKYPWSDKEGMGLKRPYED
GVTDDKDLIKKMKRNLRKVLDSKVIDSNQPMNALMRLNQIRPGLQYKLLSQSGPVHAPVF
TMSVDVDGSVHEASGSSKKTAKLHVAVKVLQAMGYPTGFDTDLDSMSADEKSDGEGKSES
STNSSNNTSHSTDSSNTLEVRTQGPILTASGKNPVMELNEKRRGLKYELISESGGSHDKR
FVMEVEVDGQKFRGAGPNKKVAKASAALAALEKLFSGPNAAGNKKKKIIPPTKGAIAAAA
AASAVAAQAVRGRGRPTLTRGPFISAAAPGYVTQGFGTPYGYSAAAAAPAYGLPKRMLLL
PIMKVPAFPIPHYSFF
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgaggtccatccggtctttcgggaacgatgaccgccacgtcatggccaaacactccacc
atctacccctcctcagaggagctggaggccgtgcaaaccctcgtctccaccgtggagtgc
gccctcaaacacgtctctgatttgatggaccaaaccacccaatcacaggccaccaacggt
caggatgacgacacagacgtcagcacagatgaatcagccgaaggcaacaccaaggagcct
ggtggcggggttctgtgtggggtgatccggatcggcctggtggccaagggcctgctcatc
aaggacgacatggacctggagctggtgctcatgtgccggaagaagcccaccgagacgctg
ctgcgcaccgtctctgacaacctgccgcagcagatccagaagcttacggaggagaagtac
gaggtggagtgctgcgttcctgaggcggccattttggtccacagcaccggcgagccaaaa
ctcagattgaaggtcacacttacctcaccacggatgagagaggagagccctgcagacaca
gatgcagaccgcgttgagccgtgcgaggagccggaggtgctggacagagagcggtgcctg
gtggcgttggcgtccctgcggcatgccaaatggttccaggctcgagtgaatgggctgaaa
tcgtgtgtgatcatcctgagagttctgagggacatgtgcaacagagtacccgcctgggaa
ccgctcaagggatggcccctggagctgatctgcgagaaggccatcgccacatgcaaccgg
ccgctaggagctggagaagccctgcgcagggtcatggaatgcctcgcctccggaatcctg
ctgcctggtggaccaggcttacacgacccgtgtgagaaggagcccaaggatacactggcc
agcatgacctcgctggaggctgaagccgtcacgtacagcgcacagcgtgctctacggctc
atggcgtttgggcagatctacaaggtcttggaaatggatgcacttccctcaagtaaaccc
tctcataagtacccttggtcagataaagaaggcatgggtctcaagagaccgtacgaagat
ggagtgacggatgacaaagacctcatcaagaagatgaaacgcaatctgagaaaagttctc
gacagtaaagtaatagactcaaaccaaccaatgaacgcgctgatgcgcctgaaccagatc
cgaccaggcctccagtacaagctgctgtcccagtcgggtcccgtgcacgcgcccgtcttc
accatgtctgtggacgtggacggcagcgtccacgaggcctctggctcctccaagaagacc
gccaagctgcacgtggctgtcaaggtcctgcaggcgatgggctaccccacaggttttgat
actgatctggactccatgagtgcggatgagaagtcagacggggagggcaagagcgagtcg
tccaccaactcaagcaataacacgtcccactccacagacagctccaacacactggaggtg
agaactcagggccccattctgacggcgagcggtaagaatcctgtgatggagcttaatgag
aagcgcagaggcctcaagtacgagctcatctcagagagtggaggaagccacgacaagcgc
ttcgtcatggaggtggaggttgacgggcagaagttccgcggcgcgggacccaataagaag
gtggcaaaggcgagtgccgccctggccgctctggagaagctcttctccggccccaacgcc
gctggcaacaagaagaagaagatcatccctccgactaaaggggccattgcggctgccgct
gctgcgtctgctgtggccgctcaggcagtcaggggtcgaggccgacccactctaacaaga
ggacccttcatcagcgccgccgcaccgggatatgtcacgcaaggctttgggactccgtat
gggtacagtgcagctgcagcagctccggcttacggtctacccaagagaatgcttctgttg
cccatcatgaaagtccctgccttccctatccctcattactccttcttttag
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