Clupea harengus (Atlantic herring): 105902589
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Entry
105902589 CDS
T09045
Symbol
mybpc1
Name
(RefSeq) myosin-binding protein C, slow-type
KO
K12557
myosin-binding protein C, slow-type
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105902589 (mybpc1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105902589 (mybpc1)
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
105902589 (mybpc1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
I-set
Ig_3
fn3
Ig_2
ig
THB
Ig_DSCAM-DSCAML_C
V-set
PHD_4
Motif
Other DBs
NCBI-GeneID:
105902589
NCBI-ProteinID:
XP_042566075
Ensembl:
ENSCHAG00000001488
UniProt:
A0A8M1KTT9
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Position
16:4518234..4561426
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AA seq
1360 aa
AA seq
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MGRQVEVEVEAHRAVNTTPHHPASPQAGMPTVFTGGGARAFQRGGTRIVETDWHAKAHHA
KDDGQPGDSVGPDAETPPTPEIALEVSPPEEAVAESKDPIGTEGEEVTETGPIVTEVTEP
GPIVTEVQEPEPIVTEVSDQEPMVVEVTEPEPEPKPVVVEVTEAGPITAAVPESAQPIVA
EVKDLEPVVTEALEAVEVKEEAPCTPPPLDKDDDATASTPSPPPPSDDSVPVSSMGRKDS
VWSLGEGQPPEDLDKPIETPPLFTLMIERPETSSISVGADITFVAKVKAEDLLRKPTIKW
FKGKWMDLASKTGKHMQLKESFDRFTKIHTYEMHIIKAKPNYGGNYRCEVNYKDKFDSCS
FDLEVKETAEQQNVDIRSAFKRSSEGSEDAGDLDFSGLLKHREPKLEEAPDVDVWDILKN
ARPDEYEKIAFEYGITDLRGLLKRLKKTTKVVKKSEAFAKKLDPAYQADKGGKIRLIVDL
ADPTVELKWYKNGQEIRPTPNNRKYIFEHKGTQRIMVINNCQMGDDAAYSVTAGDEKCST
ELFVKEIPVNITKQLEAVKTTVNERIELECEVSEEGAKIKWMKNGVEVPTGVRSRYRVKS
EGTKHWLIIDDATKEDTGTYSLMATGGNSEAHVQVDLKPLKILQDLADVTVLLGQPLPLH
CEITPGNVPGRWYRNGQLIQSNDRINILHRAKNHRMEVQATTIHDAGDYTFVLEGYSQSL
SAKVHIIDPPRVNLDALNFPDNTLTIVAGNKLRLEVPISGEPAPRVVWMKGERVILESGN
RVRAETFADQTCLTIEITEREDSGNYKIVLQNEAGEATANVKVKVVDIPDPPPAPLVPVV
GGDWCSMTWEPPVYNGGSPILGYFIERKKKQSSRWMRLNFDLCKETTFEPKKMIEGVPYE
VRIFAVNAIGVSKASEPSKAFVPLAVTSEPTMLVVDDVTDTTVTMKWRPPDTIGAAGLDG
YLVEYQIEGSDDWITANPGLTEKTRYTVTGLPTGVKIQVRVRAINAAGASQPRTTQHAIF
VKEVIEPPKIRVPRHLKQTFTRKVGEAVNIVVPFMGKPRPKVGWLKDGEEVEPAQVNIRN
TESDSIFFIRKAERKHSGKYEMTVQVENHKDTALLDIQIVDLPGPPQCVKIEEVWGENVA
LDWSPPKDNGNAPITGYTIQKADKKTMEWYTCIEHYHRTCITISDLVVGNEYFFRIFSEN
MCGLSESATVTKDSALIVKQGLHLKNPEYIDRDFTEPPKFTQPLTSILAIAGYNATLNCS
VRANPRPKIIWMKNKIAIVDDPRYRMFSNQGVCTLEIRKPSPYDGGTYSCKAINDLGEAL
VECKLEVKGGYTFMELMKRGVPLHLIDKYMNETKQEQASN
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
atggggaggcaagtggaggtggaggtggaggcccacagggcggttaacaccaccccgcac
caccccgcctcgccccaggctggcatgcctacagtattcacaggcggaggtgccagggct
tttcagagagggggcacacggattgtggaaactgactggcatgcgaaagcccaccacgcc
aaagatgacggccaacctggagacagtgttggtcctgatgctgagacccctccgacacct
gagattgctctcgaggtgtcgccccctgaagaggctgtagcggagagcaaagaccccata
ggcactgagggggaggaagtcactgagactgggccaatagtgactgaggtcacagagcct
gggccaatcgtaactgaggtccaagagcctgagccaatcgtgacagaggtcagtgaccaa
gagccaatggtggtagaggtgactgagccagagccagagccaaagccagttgtggttgag
gtcacagaagcagggccaatcacggcagcggtgcccgagtcagcccagcctatagtagct
gaggtgaaggatctggagccagtagtgactgaggcgctagaggctgtagaggtaaaggag
gaagccccctgcacgccccctcccctggataaagatgatgacgcaacagccagcacccct
tcaccaccacccccttcagatgatagcgtgcctgtgtcgtccatggggagaaaagactca
gtgtggtccttgggcgaagggcaacctcctgaggacttagacaagccaattgaaactccg
cccctcttcaccctcatgattgagagacctgaaacatcatccatctcagtcggcgcggac
atcacctttgttgccaaggtgaaagcggaggacctgctgcgcaaacccacaatcaaatgg
ttcaagggaaaatggatggacttggccagcaagactggaaaacacatgcagctgaaggag
tcatttgatcgcttcaccaagatccacacatatgagatgcacatcattaaggccaaacct
aattatggtggcaactacaggtgtgaagtgaactacaaggacaaatttgacagttgctcc
tttgacctggaagtgaaagagacagctgagcagcagaatgttgacattcgatcggctttc
aaaagaagcagtgaaggcagcgaggatgcgggcgatcttgactttagtggtctcctaaag
catagggagcctaaactggaagaggcccccgacgtggacgtctgggatatcctcaaaaac
gctcggccagacgagtacgagaagatagccttcgagtacggcatcaccgacctacgcggg
cttctgaagagactgaagaaaacaacgaaggtcgtgaaaaagagtgaagcttttgccaaa
aagctggatccggcgtaccaggcggacaaaggtggaaaaatccgccttatagttgacctt
gccgacccgacagtggagctgaaatggtacaagaacgggcaagagattcgccccactccc
aataaccggaagtacatctttgagcacaagggcacgcagaggatcatggtcatcaacaac
tgccaaatgggcgatgatgctgcctactcagttaccgccggagatgagaagtgttccact
gagctttttgtaaaagagatccctgtgaacattactaagcaactggaggctgtgaagacc
acagtcaacgagcgcattgagctggagtgtgaagtctctgaggagggagctaaaatcaaa
tggatgaagaacggcgttgaagttccaactggagttcgttctcggtaccgggtgaaatcc
gagggcaccaagcactggctgattatagacgatgctacgaaggaggacacgggcacttac
tccctgatggcaacagggggcaacagtgaggcccatgttcaggtggacttgaagcctctg
aagattctccaggatctggcggacgtgacggttctgttgggtcagcctctgcctctccac
tgtgagatcaccccgggaaacgttccgggccgctggtaccgcaacggtcagctgatacag
tcgaacgaccgcatcaacatcctccaccgggccaagaaccacagaatggaggtccaggcc
accacaattcatgatgcaggggattacacgtttgttctggagggctactcccagagtcta
tctgccaaagttcacatcattgatcctcccagggtgaatctggatgcactcaatttccca
gacaacaccctcaccattgtggccggaaacaaactccgcctggaggtccccatcagtgga
gagccggctccaagagtggtctggatgaagggagagagggtgatcttggagtcagggaac
agagtgcgggcggagacctttgccgaccaaacctgtctcaccattgagatcacagagagg
gaggactcgggcaactacaagatagtcctgcagaacgaggcgggagaggccaccgccaat
gtcaaggtcaaggtcgtggatattccagatccacctccagctcctctagttccggtggtc
ggaggagactggtgctccatgacatgggagcctccagtctacaatggaggatcacctatt
ttgggctacttcattgagaggaagaagaaacagagctcacggtggatgaggttgaacttt
gacctctgcaaggagacgacctttgaacccaagaagatgattgagggcgttccgtatgag
gtgcgaatcttcgctgtgaacgccattggtgtctccaaggctagcgagccctccaaagcc
tttgtaccactcgctgtaaccagtgaaccaaccatgctggtggtggatgatgtcactgac
accacggtaacaatgaagtggcgtccacctgacacgatcggtgccgcgggattggacggc
tatctggtggaataccaaattgaaggatcggacgattggatcacagccaatccagggctg
acggagaagaccaggtacaccgtgacgggcctgcccacgggggtgaagatccaggtgagg
gtgagggccattaacgccgccggagccagccaaccgcgcaccacccaacacgccatcttc
gtcaaggaggtcatcgaacctccaaagatcagggttccccgtcacctgaagcagacattc
acccgtaaagtgggcgaagccgtcaatatcgtcgtgcccttcatgggcaagcctaggcca
aaggtcggctggctgaaagacggtgaggaggtggagcccgcccaggtcaacatccgcaac
acggagagcgacagcatcttcttcatacgcaaagccgagcgcaaacactccggcaagtat
gagatgaccgtgcaggtggagaaccataaggacacggctctgctggacatccagatcgtc
gatcttcctggacctccccagtgtgttaagattgaggaagtgtggggggagaacgtggca
ctggattggtctcctcccaaagacaatggaaatgctccaatcacaggctacaccattcag
aaagcagataaaaagactatggagtggtacacctgtatcgagcattaccaccgtacctgc
attaccatcagtgacctggtggtggggaatgagtatttcttccgcatcttctcagagaac
atgtgcggcctcagcgagtccgccaccgtcaccaaagacagcgctctcatcgtcaaacaa
gggctacacctcaagaacccagagtacatcgaccgcgacttcaccgagccgccgaagttc
acacagccgctcaccagcatcttagccatcgccggctacaacgccacgctcaactgcagc
gtcagggctaaccccaggcccaagatcatctggatgaagaacaagatagcaatagtagac
gacccacgctaccgcatgtttagcaaccaaggcgtgtgcaccctggagatccgtaagcct
agcccctatgacggaggcacgtactcctgcaaggccatcaatgacctcggcgaggctctg
gtggaatgcaagctggaggtcaaaggcgggtacacctttatggagctcatgaagagggga
gtgcccctacacctgattgacaagtacatgaacgagacaaaacaagagcaggcgtccaac
tga
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