Clupea harengus (Atlantic herring): 105902605
Help
Entry
105902605 CDS
T09045
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase 7 homolog-like protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
char03016
]
105902605 (pus7l)
Enzymes [BR:
char01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
105902605 (pus7l)
Transfer RNA biogenesis [BR:
char03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
105902605 (pus7l)
Prokaryotic type
105902605 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
Motif
Other DBs
NCBI-GeneID:
105902605
NCBI-ProteinID:
XP_012685700
Ensembl:
ENSCHAG00000024665
UniProt:
A0A6P3W1K8
LinkDB
All DBs
Position
16:complement(4097907..4105227)
Genome browser
AA seq
693 aa
AA seq
DB search
MEEDSLIAPVVPSKFLSNHEGFLGTIKNCTQDFVVTEINIHGQLVTKATCGSPSGQVHED
SEKCHNPKRRRIEENTVSSLGSGQTTTIQDGTDQVTDDSDVTEVLQSDSFDLSVILGCSV
SEQLELFTTALRLEGSTPVLDDGRTAKGQLSLGTFTDKAQRANVHRAVRHNYPFLMTETN
QAEILVKEDPDFKKLSSLVSEGDCEDFFRFIDAKVTGSTFTFKPDASKEHRTSVHHFLMG
RFGKLVETKCFANQNGSAITVRLREKGKPHRKRSAADAGVEDDTPTYTGFTLRKENLETL
EAISYMAAGLGVLPSDFTYAGIKDKRAVTYQNMVVKKVSTQQLTEKISEFQPRGITLSHI
RSVSEPLHLGRLQGNHFDLVVRDLKPHGNRCHGDLEKLVDEAVENTKTRGFVNYYGPQRF
GSAQSIQADQIGLALLKEDMEAAIKLFFTPNDEDDLPNKAKHHFLNTGNAKESLALMPAY
KARERLMLRALHRYGAGPQGSAHAWLSLPHGMRVFYLHAYCSRVWNDAAAHRLKALGTKP
TQGDLVWASPGEGAGEGMEVGTPQIHVVTAAEAEEGVFSLEQVVLPMPGNTVQYPENLLG
RWYRERLAQDGLGSSRFRLPPLKLNVPGCYRPLLARAHNLTHTLLPHSGEDARGDGDAGR
SEQTHTPSLSLAFDLDASCYATVFLREIMRCDL
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagactcattaatagcgccggtggtcccctctaaattcttatcaaatcatgag
ggattcctgggcaccattaaaaactgcacccaagattttgtcgtgacagaaataaacatc
cacggtcagctggttaccaaagccacctgtgggtcaccctcaggccaagtacacgaggat
agtgaaaaatgccacaatcccaaacgacgtaggattgaagagaacacagtatccagcctc
gggtcagggcaaaccacaaccattcaagacggcactgaccaagtcacggatgacagtgat
gtcactgaggtgcttcagtcagattcttttgatcttagtgtgatcttggggtgctcagtg
tctgaacagctggaacttttcacgactgccttgagactcgagggcagtacgcctgtgctt
gatgatggtaggacagcaaaaggacaattgtccctgggcacgttcactgataaagcccag
agagccaacgtccacagagccgtacgccacaactacccgtttctgatgaccgaaacaaac
caggcagagatcctcgtgaaggaagaccccgacttcaaaaagctctccagcctcgtgtct
gagggagactgtgaggacttcttcaggttcatagacgccaaggtcactggatctacgttc
acgttcaaaccagacgccagtaaggagcataggacctctgtgcatcattttctcatgggc
agatttggaaaactggtggagacaaagtgcttcgccaaccagaacggcagcgccatcact
gtgaggttaagagagaaaggcaagccacacaggaagagatcagctgcggatgctggtgtt
gaagacgacactcccacgtacactggtttcactttgcggaaggagaacctggagaccttg
gaggccatcagctacatggctgcaggtctgggagtcctgccctcagacttcacctacgcg
ggcatcaaggacaagagggccgtcacctaccagaacatggtggtcaagaaggtctcgaca
cagcaacttacagagaagatctcggagttccaacccagaggaattaccctgtcccacatc
cgctctgtgtcggaacctcttcacctgggcaggcttcagggaaaccactttgacctcgtc
gtcagggacctcaaaccccatggcaaccggtgccatggtgacctggagaagctggtggac
gaggccgtggagaatacaaagacgcggggctttgtcaactattatggaccacagaggttt
gggagcgcacagagtattcaggctgatcaaattggacttgccctgttgaaggaggacatg
gaggctgccatcaagctattcttcacccctaatgatgaggatgacctaccaaacaaagcc
aaacatcatttcctcaacacaggtaatgccaaagagagcctggcgctgatgcccgcctat
aaggcccgcgagcggctgatgctgcgcgccctccaccgctacggcgcggggccacagggc
agcgcccacgcctggctcagcctgccgcacggcatgcgcgtcttctacctgcacgcctac
tgcagccgcgtgtggaacgacgcagccgctcacaggctgaaggcgctggggaccaagccc
acgcagggtgacctggtctgggcatcgccaggggagggagctggggagggcatggaggtc
ggtacaccacagatccatgtggtgacggcggccgaggcggaagagggagtattttcactt
gaacaggtggttctgccgatgccagggaacaccgttcagtacccagagaaccttctgggc
cggtggtaccgggagagattggcacaggatggcctcgggtccagtcgtttccggctgccc
cctctgaagctgaacgtgccaggctgctaccgccccctgctggcgcgcgcccacaacctc
acgcacacactcctcccacacagcggcgaggacgcacgcggcgacggtgatgccggacgc
tcggagcagacacacacgccgtctctgtcgctggcgttcgatttggacgcgtcctgctac
gccaccgtcttcctcagagaaattatgaggtgtgatctgtga
DBGET
integrated database retrieval system
