Clupea harengus (Atlantic herring): 105902641
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Entry
105902641 CDS
T09045
Symbol
ptprsa
Name
(RefSeq) receptor-type tyrosine-protein phosphatase S isoform X1
KO
K06778
receptor-type tyrosine-protein phosphatase S [EC:
3.1.3.48
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
105902641 (ptprsa)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
105902641 (ptprsa)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
105902641 (ptprsa)
Enzymes [BR:
char01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
105902641 (ptprsa)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
105902641 (ptprsa)
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
Type II RPTP family
105902641 (ptprsa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
Ig_3
I-set
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
Interfer-bind
Tc-R-P
PTP-SAK
V-set
DSPc
PTPlike_phytase
Y_phosphatase3
Fn3_PTPRU
C2-set_3
DUF4405
DUF5849
Motif
Other DBs
NCBI-GeneID:
105902641
NCBI-ProteinID:
XP_042564817
Ensembl:
ENSCHAG00000010587
UniProt:
A0A8M1KLR6
LinkDB
All DBs
Position
10:16822468..17040787
Genome browser
AA seq
1937 aa
AA seq
DB search
MMARGVVTFVPFLLSLSALLLSLHSSSALSLPTFTKLPMDLIGVSGGAVSFVCQASGDPK
PKVTWNKKGKRVNSPRVESIDFDEGAGAVLRIQPLRAPRDENIYECVAENTVGEITTTAK
LSIIREDLLPTGFPRIDMGPQLKVVERTRTATMLCAASGNPDPEISWFKDLLPIDPSASN
GRIKQLRSEAFEGTPIRGALQIENSEETDQGKYECVASNVEGVRFSSPANLYVRERREVR
RVPPRFSIFPTNHEIMPGGSVNITCVAVGSPMPYVKWMLNSEDLTPEDEMPVGRNVLALD
GIHESANYTCVAMSSLGIIEAVSQITVKSLPKPPGTPMVTETTATSITITWDSGNPDPVL
HYIIQYRGKTVDSKYETMDGITTTRYSIGGLSPNTDYEIRVSAFNTIGQGPPSEPVEART
GEQAPASPPRSVQARIISANTVVVRWDEPEEPNGQIKGYRVYYTMDDSQPLSQWQIHNVQ
DSVLTTIQSLVSSETYTIRVLAFTSVGDGPPSDPIQVKMVLGVPGQPEKFQVGAVSDTSI
ELTWETAGNLNYELRYREGAKGSEVTKKFGASSSYVVEGLKPNTEYLFSLAAISKSGIGA
FTSEISQKTSQAKPSAPPQDVKCSGASSTSLLVSWLPPSAESQNGELTGYVVSHQVEGAE
VGAGELRVPDAPPSAQQLVLQGLEKWTQYSVSVAASTSKGRGPYSDPLVCRTDEDVPGGP
PRRAEVEVLNSTAIKVTWRSLQPGRQHGQIRGYQVHYVRMENGESRGLPLIKDVMLADAQ
WETDESVDYEMIIGSLQPNTTYSVTVAAYTTKGDGTRSKAKIVVTKGAVPGLPSLSVWQE
TASSALVRWQPPVPLVVGVEVQGYRLQFGRKDVSPLATLEFTASENEYTVANVHRGATYL
FRLSAKSRGGFGDEAAQELSVPEEVPRGYPQIADGANVTCCSLQLSWLPPVLAERNGAIT
EYTLAYQEADAAGAPRELSLPAGQSSYTLNSLKPNAAYDIKIRAHTSVGPGPYSPPLQYR
TAALGSDVPRNFTVKFVTKTSVLLTWKFSESRVPYRCMIEYNRQKMDVDARQMKTQVGRL
QPNTSYEFRMSCQDSGEGAQQHRVQTRTSPPIQMKRPEFDMEREPESTLTIILPPLVAKD
IIKNVYVVVVPMKKAKSPPATPDDVDLDELLKEAGTQTRQSRQLKQADPSRPYIAASFRP
ASLPPSFTLGNELIFRGYENRVLQAGQEYRVFLLAELNSTSGRMFVTSPFTDTVPVPEVE
SQPVESGGDGLIWVVGPVLAVVFIICIVIGILLYKNKPDSSKRKEAEPRTKCLLNNADIM
PHHPTDPVEMRRINFQTPDSGLSSPLSEGGFDCESMVSHPPIPISELAEHTELLKANDNL
KLSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVILAPIEGITGSDYINSNY
IDGYRKQNAYIATQGPLPETFGDFWRMVWEQRSATVVMMTRLEEKSRIKCDQYWPSRGTE
TYGMTQITLLDTIELATFCVRTFSLHKNGSSEKREVRQFQFTAWPDHGVPEYPTPFLAFL
RRVKTCNPPDAGPIIAHCSAGVGRTGCFIVIDAMLERIKHEKTVDIYGHVTLMRAQRNYM
VQTEDQYSFIHDALLEAVACGNTEVAARSLFSYIQKLAQVETGEHVTGMELEFKRLANSK
AHTSRFISANLPCNKFKNRLVNIMPYETTRVCLQPIRGLEGSDYINASFIDGYRQQHAYI
ATQGPLAETTEDFWRMMWENNSTIVVMLTKLREMGREKCHQYWPAERSARYQYFVVDPMA
EYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEGFIDFIGQVHKTKEQFG
QDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKMLRTQRPAMVQTEDEYQF
CYQAALEYLGSFDHYAT
NT seq
5814 nt
NT seq
+upstream
nt +downstream
nt
atgatggcccgtggggtcgtgacctttgtgcccttcctgctctcgctcagtgctctgctg
ctgtcgctacacagctcaagcgccttatctctccccaccttcaccaagcttcccatggac
ctgatcggagtgtcaggaggggctgtgtccttcgtgtgccaggccagcggagaccccaag
cccaaagtcacctggaacaagaaggggaagcgggtgaactcccctcgagtggagagtatt
gactttgatgaaggagcgggggcagtgttgcggatccagcccctgcgagctccccgcgat
gagaacatctatgagtgtgtggccgagaacaccgttggggagatcaccaccactgccaag
ctgtcaatcatccgagaggacctgctcccgacgggcttcccccggatagacatgggtccc
cagctgaaggtggttgagcgcacgcggacggccaccatgctgtgtgcagccagtggcaac
cccgaccccgagatcagttggttcaaggatctgttgcccatcgaccccagcgccagcaat
ggacgcatcaaacagctccgatcagaggcctttgagggtacccccatccgaggtgccctg
cagatagagaacagcgaggagactgaccaggggaagtacgagtgtgtggcgtctaacgtg
gagggcgtgcgcttctcctctcctgccaacctgtatgtgcgagagcgccgagaagtccgc
cgcgtccccccgcgcttctccattttccccaccaaccacgagatcatgccgggcggcagc
gtgaacatcacgtgtgtggcggtgggctcgcccatgccctacgtcaagtggatgctgaac
tccgaggacctgacgcccgaggacgagatgcccgtgggccgcaacgtgctggcgctggac
ggcatccacgagtcggccaactacacctgcgtggccatgagcagtctgggcatcatcgag
gccgtgtctcagatcaccgtcaagtccctgcccaaaccccctggcacccccatggtaacc
gaaaccacggcgaccagcatcaccatcacttgggacagcggcaaccctgacccggtgctc
cactacatcatccagtaccgcggcaagacggtcgacagcaagtacgagaccatggacggc
atcaccaccacgcgctacagcatcggcggcctctcgcccaacaccgactacgagatccgc
gtctccgccttcaacaccatcggccagggcccgccaagtgagccggtggaggcgcgcacg
ggcgagcaggcccccgccagcccccccaggagcgtgcaggcgcgcatcatctccgctaac
accgtggtggtgcgctgggacgagcccgaggagcccaacggccagatcaagggctaccgc
gtctactacaccatggacgacagccagccgctcagccagtggcagatccacaacgtgcag
gacagcgtcctcaccaccatccagagcctggtctccagcgagacctacaccatccgcgtc
ctggcgttcacctccgtaggagacgggccgccctcagaccccatacaggtcaaaatggtc
ctgggggttcctggccagccggagaagttccaggtgggggcggtgtctgacaccagtatc
gagctcacctgggagaccgcagggaacctgaactatgagctccgctatagagaaggagcc
aaaggcagcgaggtgactaaaaagttcggggcctcgtcctcgtacgtggtggaggggctg
aagcccaacactgagtacctcttctctctggcagccatctccaaatcgggcatcggtgcc
ttcaccagtgagatctcccagaagacctcccaagccaagccctctgccccccctcaagac
gtgaagtgctccggcgccagctccacctccctgctggtaagttggctgcccccgtcggcg
gagagccagaacggcgagctgacggggtacgtagtgagccaccaggtggagggagcggag
gtgggcgcgggggagctgagggtgcctgatgcgccccctagtgcccagcagctggtcctg
cagggcttggagaagtggacccagtacagcgtgagcgtggccgcctccacttccaagggc
cgcgggccctacagcgacccgctcgtctgccgcaccgacgaggatgtgcccggcggcccc
cctcgtcgtgcggaggtggaggtgttgaactccacggcgattaaggtgacgtggcgctcg
ctgcagccggggcggcagcacggccagatccgcggctaccaggtgcactacgtgcgcatg
gagaacggagagtcacgcggcctgccactcatcaaggacgtcatgctcgccgacgcacag
tgggaaaccgacgagtcggtcgactacgagatgatcattggcagtctacagcccaatacc
acgtactccgttaccgtggcagcctacaccaccaaaggggatgggacacgcagcaaggcc
aaaattgtggtgaccaagggagcagtgcctgggctcccatctctgagtgtgtggcaggag
actgcgagttcggcactggtgcgttggcagcctccggtgccgctggttgtcggtgtggag
gtccagggctaccggctgcagttcggccgtaaggacgtgagtcccctggccacgctggag
ttcacggcaagcgagaacgagtacaccgtcgccaacgtgcaccgcggcgccacctacctg
ttcaggctctcggccaagagccgcggcggcttcggggacgaggccgcgcaggagctctcc
gtgcccgaggaggtgccacgcggctacccccagatcgccgacggcgccaacgtcacctgc
tgctcgctgcagctgtcctggctgccgccggtgctggccgagcggaacggcgccatcaca
gagtacacgctggcgtaccaggaggcggacgcggccggggcgccccgcgagctctcgctg
cccgccggccagtccagctacacgctcaacagcctcaagcccaacgccgcctacgacatc
aaaatacgcgctcacaccagtgtaggtccgggcccctacagcccgcccctgcagtaccgc
actgcggccctcggctcagacgtccccaggaacttcacggtgaagttcgtcaccaagacg
tcggtgctcctgacctggaagttctctgagagtcgtgtcccatatcgctgcatgattgag
tataaccgtcagaagatggacgtggacgcgcgtcagatgaagacccaggtcggccgcctg
cagcccaacaccagctacgagttccgcatgtcgtgtcaggacagtggggagggggcgcag
cagcaccgggtgcagacacgcacctccccccccatccagatgaagaggccagaattcgac
atggagagggagcccgagagcactctcaccatcatattacccccactggtggccaaggac
atcatcaagaatgtctatgtggtggtggtgcccatgaagaaggctaaatcaccgccggca
acacctgatgatgtcgatctggatgagctgctgaaggaggcggggactcagacccggcag
tcgcggcagctgaagcaggcggaccccagcaggccctacatcgccgccagcttccggccc
gccagcctgcctcccagcttcacgctgggcaacgagctcattttccggggctacgagaac
cgcgtgttgcaggccggacaggagtaccgcgtgttcctgctggcggaactcaactccacc
agtggcaggatgtttgtgactagccccttcacagacacggtgccggtgccggaggtcgag
agccagccggtggagtccggtggagacgggctgatctgggtggtgggcccagtccttgcc
gtggtcttcatcatctgcatcgtcatcggcatcctcctctacaaaaacaagcctgacagc
agtaaacgtaaggaggcagagccacgcaccaaatgcctgctgaacaacgctgacatcatg
ccacaccaccccaccgaccccgtggagatgaggcgcatcaacttccaaacgccagattct
ggtctgagcagcccactaagtgaaggaggttttgactgtgaaagtatggtgagccacccc
cccatccccatctcggagctggcagaacacacagagctgctcaaggccaacgacaacctg
aagctctcccaggagtatgagtcaatcgatccgggccagcagttcacgtgggagcattcc
aacctggaggtcaacaagcccaagaaccgttacgccaacgtcatcgcctacgaccactcc
cgtgtcatcttggctcccattgaaggtatcactggcagcgactacattaattccaactac
attgacggctaccgtaagcagaatgcctacatcgccacccagggcccgctgcccgagacc
tttggggacttctggaggatggtgtgggagcagaggtccgctaccgtggtgatgatgaca
cgcctggaggaaaagtcacggataaagtgtgaccagtactggcccagccgtggcactgag
acgtatggcatgacccagatcaccttgctggacaccatcgagctcgccaccttctgtgtg
cgcaccttctccctgcacaagaacggctcgagtgagaagcgcgaggtccgccagttccag
ttcacggcgtggcccgatcacggcgtcccagagtaccccacacctttcctggccttcctg
aggagagtgaagacctgtaaccctcctgacgccggccccattattgcccactgcagtgcg
ggtgtgggccgcactggctgcttcatcgtgatcgacgccatgctggagcgcatcaagcac
gagaagacggtggacatctacggccacgtgacgctgatgcgcgcccagcgtaactacatg
gtgcagacggaggaccagtacagcttcatccacgacgcgctgctggaggcggtcgcctgc
ggcaacacggaggtggctgcgcgctccctgttctcctacatccagaagctggcgcaggtg
gagaccggagagcacgtcaccggcatggagctcgagttcaagcgattggccaactccaaa
gcgcacacatctcgtttcatcagtgccaacctgccctgcaacaagtttaagaaccgcctg
gtgaacatcatgccctacgagaccacacgagtctgtctgcagccaatcagggggctggag
ggctccgactacatcaacgccagcttcatagatggatacaggcagcagcatgcctacatc
gccacccagggacctctggcggagaccacagaggacttctggaggatgatgtgggagaac
aactccaccatcgtggtcatgctcaccaagctcagagagatgggacgggagaagtgccat
cagtactggccggcggagcgctctgcccgctaccagtacttcgtggtggaccccatggcc
gagtacaacatgccccagtacatcctgagggagtttaaggtcaccgacgccagggatggc
cagtcgcggacggtgaggcagttccagttcactgattggccggagcagggtgtgcccaag
tctggggagggcttcatagacttcattggacaggttcataaaaccaaggagcagtttggc
caggacgggcccatctctgtgcactgcagtgctggagtgggccggacaggagtgttcatc
accctgagcatcgtgctggagaggatgagatacgagggcgtggtggacatcttccagacc
gtcaagatgctccgcacacagagaccagccatggtgcaaacagaggatgagtaccagttc
tgctaccaggctgctctggagtacctcggcagcttcgaccactatgcaacgtaa
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integrated database retrieval system
