Clupea harengus (Atlantic herring): 105902684
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Entry
105902684 CDS
T09045
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
KO
K10523
speckle-type POZ protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
105902684 (spopla)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
105902684 (spopla)
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul3 complex
Adoptor and target recognizing subunit (BTB)
105902684 (spopla)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MATH_2
BTB
BACK_BPM_SPOP
MATH
BTB_KLHL33
Motif
Other DBs
NCBI-GeneID:
105902684
NCBI-ProteinID:
XP_012685784
Ensembl:
ENSCHAG00000025257
UniProt:
A0A6P8H7I5
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Position
2:complement(23698843..23708038)
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AA seq
392 aa
AA seq
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MSRVPTPPPPGEMSVGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNVLK
VPECQLADDLGNLWECSRFTDCSLYVRGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVDPEVFKEMMGFIYTGKAPNLEKMADSLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSILRQLGCKDGKNWNSNHAADIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgggtccccaccccccctcctcccggggagatgtccgtcgggcctgtggcggag
agctggtgttacacccaggttaaagtagtgaagttttcctacatgtggaccataaacaac
ttcagtttttgcagagaggagatgggagaggttttaaaaagttcaaccttttcttcgggt
cccaatgacaaaatgaaatggtgcctgcgagtcaatcccaagggacttgatgatgaaagc
aaagattatttatctttgtatttacttcttgttagttgtccaaaaagtgaagtaagggca
aagttcaaattttccctactgaatgcgaagagggaagaaacaaaagctatggaaagccaa
agagcatatcgatttgtccaagggaaagactggggtttcaaaaaatttattaggagagat
tttctgctcgacgaagcaaacggactcctaccggatgacaagctcactctgttctgcgag
gtgagcgtggtccaggactcggtgaatatctcgggccagtccaacatgaacgtgctgaag
gtgccggagtgccagctggctgacgacctggggaacctctgggagtgctcgcgctttacc
gactgcagcctctacgtcaggggccaggagttcaaagcccacaaatccatcctggcagcg
agatcgccagtctttaatgctatgtttgagcacgaaatggaagaaagcaaaaagaatcga
gtagacatcagtgacgtagaccctgaagtcttcaaagagatgatgggtttcatctacacg
ggaaaagcgccaaacctggagaaaatggctgacagtttgttagcagctgcagataagtac
gctctggagcgcttaaaggtcatgtgtgaagaggctctgtgcaacagcctctcggtggag
aatgtggccgacaccctcatcctcgcagatttgcacagcgccgagcagctcaaagcacaa
gccatagattttatcaacaggtgcagtatcctcagacagctgggctgcaaagacgggaaa
aactggaatagcaaccatgccgcagacataatggaaactgcgggctggaagtcaatgatc
cagtcccaccctcacttagtggcagaggcttttcgtgcgctggcatctgcccagtgccca
ccctttggcctgcccaggaaacgcctaaaacagtcttga
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