KEGG   Clupea harengus (Atlantic herring): 105902684
Entry
105902684         CDS       T09045                                 
Symbol
spopla
Name
(RefSeq) speckle-type POZ protein-like A
  KO
K10523  speckle-type POZ protein
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04340  Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04340 Hedgehog signaling pathway
    105902684 (spopla)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    105902684 (spopla)
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul3 complex
    Adoptor and target recognizing subunit (BTB)
     105902684 (spopla)
SSDB
Motif
Pfam: MATH_2 BTB BACK_BPM_SPOP MATH BTB_KLHL33
Other DBs
NCBI-GeneID: 105902684
NCBI-ProteinID: XP_012685784
Ensembl: ENSCHAG00000025257
UniProt: A0A6P8H7I5
LinkDB
Position
2:complement(23698843..23708038)
AA seq 392 aa
MSRVPTPPPPGEMSVGPVAESWCYTQVKVVKFSYMWTINNFSFCREEMGEVLKSSTFSSG
PNDKMKWCLRVNPKGLDDESKDYLSLYLLLVSCPKSEVRAKFKFSLLNAKREETKAMESQ
RAYRFVQGKDWGFKKFIRRDFLLDEANGLLPDDKLTLFCEVSVVQDSVNISGQSNMNVLK
VPECQLADDLGNLWECSRFTDCSLYVRGQEFKAHKSILAARSPVFNAMFEHEMEESKKNR
VDISDVDPEVFKEMMGFIYTGKAPNLEKMADSLLAAADKYALERLKVMCEEALCNSLSVE
NVADTLILADLHSAEQLKAQAIDFINRCSILRQLGCKDGKNWNSNHAADIMETAGWKSMI
QSHPHLVAEAFRALASAQCPPFGLPRKRLKQS
NT seq 1179 nt   +upstreamnt  +downstreamnt
atgtcacgggtccccaccccccctcctcccggggagatgtccgtcgggcctgtggcggag
agctggtgttacacccaggttaaagtagtgaagttttcctacatgtggaccataaacaac
ttcagtttttgcagagaggagatgggagaggttttaaaaagttcaaccttttcttcgggt
cccaatgacaaaatgaaatggtgcctgcgagtcaatcccaagggacttgatgatgaaagc
aaagattatttatctttgtatttacttcttgttagttgtccaaaaagtgaagtaagggca
aagttcaaattttccctactgaatgcgaagagggaagaaacaaaagctatggaaagccaa
agagcatatcgatttgtccaagggaaagactggggtttcaaaaaatttattaggagagat
tttctgctcgacgaagcaaacggactcctaccggatgacaagctcactctgttctgcgag
gtgagcgtggtccaggactcggtgaatatctcgggccagtccaacatgaacgtgctgaag
gtgccggagtgccagctggctgacgacctggggaacctctgggagtgctcgcgctttacc
gactgcagcctctacgtcaggggccaggagttcaaagcccacaaatccatcctggcagcg
agatcgccagtctttaatgctatgtttgagcacgaaatggaagaaagcaaaaagaatcga
gtagacatcagtgacgtagaccctgaagtcttcaaagagatgatgggtttcatctacacg
ggaaaagcgccaaacctggagaaaatggctgacagtttgttagcagctgcagataagtac
gctctggagcgcttaaaggtcatgtgtgaagaggctctgtgcaacagcctctcggtggag
aatgtggccgacaccctcatcctcgcagatttgcacagcgccgagcagctcaaagcacaa
gccatagattttatcaacaggtgcagtatcctcagacagctgggctgcaaagacgggaaa
aactggaatagcaaccatgccgcagacataatggaaactgcgggctggaagtcaatgatc
cagtcccaccctcacttagtggcagaggcttttcgtgcgctggcatctgcccagtgccca
ccctttggcctgcccaggaaacgcctaaaacagtcttga

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