Clupea harengus (Atlantic herring): 105902718
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Entry
105902718 CDS
T09045
Symbol
rorb
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
KO
K08533
RAR-related orphan receptor beta
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
105902718 (rorb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
105902718 (rorb)
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
105902718 (rorb)
Nuclear receptors [BR:
char03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
105902718 (rorb)
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
105902718
NCBI-ProteinID:
XP_031426111
Ensembl:
ENSCHAG00000016560
UniProt:
A0A6P8FRC3
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Position
7:complement(5233977..5263481)
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AA seq
550 aa
AA seq
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MLALLTAQLNRPTIAQTRKLLYVIFKAAYTLWNAFAQTSSSLTAVPSKLFCRGSCFYNSL
CLFLHDCCVRERVGTTIMRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAA
YSCPRQRNCLIDRTNRNRCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQR
IANERLQASGEAEALARVYSTGLTNGLGALNQELGGAYANGHIIDMPKNGQNGNGGIPNG
PAGGFYSMDSTQPSPDQSGLDMAGIKQIKQEPIYDLTPVPNLFTYGAYQEGQLTPGVSMS
ELDRIAQNIIKSHLETCQYTAEELQQLAWQTHTYDEVKMYQSKTREALWQQCAIQITHAI
QYVVEFAKRITGFMELCQNDQILLLKSGCLEVVLVRMCRAFNPLNNTVLFEGKYGGMQMF
KALGCDDLVSAVFDFAKSLSSLQLTEEEIALFSAAVLISTDRPWLMEPRKVQKLQEKIYF
ALQHIMQKNHMDEDALAKLIGRIPTLAALCTLHTEELQAFQQLHPETVNALFPPLYKELF
NPDASAAMPK
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctcgctcttctaactgcacaactcaaccgtccgaccatcgctcagacccgcaagctg
ttgtatgttattttcaaagctgcctacacgctctggaatgcttttgcacagacatcaagc
tctttaacggccgtcccatctaaacttttttgccgaggatcttgtttttacaattcttta
tgtttgtttcttcatgactgctgcgttcgggaacgcgtcggcaccactatcatgcgagcc
caaattgaagttataccctgcaaaatctgcggggacaagtcatcagggatccactatgga
gtcatcacatgtgagggatgtaagggcttcttcaggaggagtcaacagaacaacgccgca
tactcctgcccgcggcaacgcaactgcctgatcgaccggaccaaccgaaaccgatgccag
cactgccggctgcagaagtgcctggcactgggcatgtccagagacgcggtgaagttcggc
cgcatgtctaagaagcagcgcgacagcctgtatgcggaggtgcagaagcaccagcagcga
atagcgaatgagcggctgcaggcgtcgggcgaggcagaggcgctggcacgcgtctactcc
actggcctcaccaacggcctgggagcgctcaaccaagagctcggcggtgcctacgccaac
ggccacatcatcgacatgcccaaaaacggccagaacggcaacggcggcatcccaaacggg
ccggctggcggcttctacagcatggactccacccagccgtcgccggaccagtcaggcctg
gacatggccggcataaagcagatcaagcaggagcccatctacgacctgacacccgtgccc
aacctcttcacttacggggcctaccaggagggccagctcacgccgggggtctccatgagt
gagctcgatcgcattgctcagaacatcatcaagtctcaccttgagacctgccagtacacc
gccgaggagctgcagcagctagcatggcagacgcacacttacgacgaggtcaagatgtac
caaagcaagacacgagaagccctgtggcagcagtgtgcgatccagatcactcacgccatt
cagtacgtggtggagtttgccaaacgcatcacaggcttcatggaactttgccagaatgac
cagattctgctcctcaagtcaggttgtctggaggtggtgctggtccgaatgtgccgggcg
ttcaaccccctcaacaacaccgtgctgtttgaggggaagtatggcggcatgcagatgttt
aaagcactaggctgtgacgatctggtcagcgcagtctttgactttgccaagagcctgtcc
tccctgcagctgacggaggaggagatagcgctcttctctgcagccgtcctcatttccaca
gatcggccgtggctgatggagcccagaaaggttcagaaactccaggagaagatctacttt
gccctgcagcacatcatgcagaagaaccacatggacgaggacgctctcgctaagctgatt
ggccgaatccccacattggcggccctgtgcacgctgcacaccgaggagcttcaggctttc
cagcaacttcaccccgagacggtcaacgcgctcttcccccccctctacaaggagctcttc
aaccctgatgcctctgctgccatgcccaagtga
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