Clupea harengus (Atlantic herring): 105902761
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Entry
105902761 CDS
T09045
Symbol
rab7b
Name
(RefSeq) ras-related protein Rab-7b
KO
K07897
Ras-related protein Rab-7A
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04137
Mitophagy - animal
char04140
Autophagy - animal
char04144
Endocytosis
char04145
Phagosome
char04148
Efferocytosis
char05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105902761 (rab7b)
04145 Phagosome
105902761 (rab7b)
04140 Autophagy - animal
105902761 (rab7b)
04137 Mitophagy - animal
105902761 (rab7b)
04148 Efferocytosis
105902761 (rab7b)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105902761 (rab7b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105902761 (rab7b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
105902761 (rab7b)
04031 GTP-binding proteins [BR:
char04031
]
105902761 (rab7b)
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab GTPases
105902761 (rab7b)
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105902761 (rab7b)
Exosomal proteins of other body fluids (saliva and urine)
105902761 (rab7b)
Exosomal proteins of colorectal cancer cells
105902761 (rab7b)
Exosomal proteins of bladder cancer cells
105902761 (rab7b)
GTP-binding proteins [BR:
char04031
]
Small (monomeric) G-proteins
Rab Family
Rab7/9 [OT]
105902761 (rab7b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
cobW
ATP_bind_1
PduV-EutP
nSTAND3
AAA_16
Septin
NTPase_1
AAA_22
AAA_7
AAA_24
G-alpha
AAA_5
DUF5992
SRPRB
ATPase_2
ABC_tran
NACHT
NB-ARC
AAA_14
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
105902761
NCBI-ProteinID:
XP_012685870
Ensembl:
ENSCHAG00000001427
UniProt:
A0A6P3W002
LinkDB
All DBs
Position
7:complement(4773656..4778994)
Genome browser
AA seq
205 aa
AA seq
DB search
MASRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
IWDTAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
VVLGNKIDLENRQVTTKRAQAWCQSKNNIPYFETSAKEAINVDQAFQTIARDALKQESEV
ETYDFPDQIKLRDDRPTSSSDGCSC
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggcctcccgaaagaaagtcctcttgaaggtgataatccttggtgactcaggagttgga
aaaacttctctgatgaaccagtatgtgaacaagaagttcagcaatcagtacaaagccaca
atcggagcagatttccttaccaaagaagtaatggtggatgacagacttgtgacaatgcag
atctgggatacggctggtcaggagcgcttccagtcgctgggtgtggcattctaccgcggg
gccgactgctgcgtgctggtgtatgatgttactgcgcccaacacattcaagactctagac
agctggcgggatgagttcctgatccaggctagcccccgtgacccggaaaacttcccgttc
gtggtgttgggcaacaaaatcgacctggaaaaccggcaggtgacgacaaaacgagcccag
gcatggtgtcaaagtaaaaataacatcccatattttgagaccagtgccaaggaagccatc
aatgtggaccaggccttccagaccattgcacgagatgctcttaagcaggagtccgaggtg
gagacctatgatttcccggaccagatcaaactgagggacgacaggccgacttcgtccagc
gatggctgcagctgctga
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