Clupea harengus (Atlantic herring): 105902900
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Entry
105902900 CDS
T09045
Symbol
poli
Name
(RefSeq) DNA polymerase iota isoform X1
KO
K03510
DNA polymerase iota [EC:
2.7.7.7
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
105902900 (poli)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
105902900 (poli)
Enzymes [BR:
char01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
105902900 (poli)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
TLS (translesion DNA synthesis) factors
Y-family DNA polymerases
105902900 (poli)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IMS
UBM
IMS_HHH_1
IMS_C
IMS_HHH
Cdd1
DUF4332
Motif
Other DBs
NCBI-GeneID:
105902900
NCBI-ProteinID:
XP_031426360
Ensembl:
ENSCHAG00000027083
UniProt:
A0A6P8FSF2
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Position
7:complement(11245660..11252845)
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AA seq
714 aa
AA seq
DB search
MDIDDEDDDWNIGTDMLVMGKNLGSSDTPVSEASSSRVILHFDLDCFYAQVEMIRNPALR
NKPLGIQQKYIIVTCNYVARDLGLTKLMSVTDALEKCPQLVLVKGEDLTHYREMSYKVTE
LLMSYYPLVQRLGFDENFLDVTEMVDTKVKQAPSTDLTFSGHIYNEESLAVYASDYPRLA
IGSHIAAELREAIKSNLGLTSCAGVATNKLLAKLVSGTFKPNQQTILLPESTADIMGSLS
GLRKVPGIGHRTGERLKALGLITVRDLQCIPPAELAREFGAASAQHLQNLAQGIDNSPIT
PAGPPQSLSDEDSFKKMSLTTEVLKKIEDLLISLMERMFKDGRQPSTFRLTIRRFLATNR
YFSRESRQCPIPNHIGQKITTGSCDALAQLVNIAMKLFHKMIDTNSPFHLTLINVCFSNL
QSKSDGRGSITSFFTQRSPKKVLSVSQQQNSTLENLSVKGSSSSLPGDCTAFANDSSGKR
DSQSTSSKPSEQKKPPPLRHIGTPLSVKSPVPEWTQVPVNSNEHHRPSPSQDPEFLHLPP
DVDPDVFKHLPESIQKELLSGFYAGEHEDRQGTSSQSAAVISFHQKLTDQTEPPLQQSSM
PTDSIGSGNGSECVKQTTEQTFFFAHRERLSTCTEQEEGNNRSPDTDYPSNVDPTVFSEL
PPELQRELLSEWRQQKPVLKIPSKKVGKTASTKDKKVATKAGQANNLLNYFKPD
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
atggatattgatgatgaagatgatgactggaatattggtacagatatgctcgtcatgggt
aagaacttagggtccagtgacacccctgtcagcgaagcctcatcctcccgagttatcttg
cattttgacttggactgtttttacgcacaagtggaaatgattcgaaaccctgcactacga
aacaaacctttaggcattcaacaaaagtacatcattgtcacttgtaactatgtggcaaga
gatctcggtttgacaaaactgatgtcagtgacagatgctctagaaaagtgccctcagctg
gtgttggtcaaaggcgaggatctcactcactacagagagatgtcttacaaagtaacagag
cttctgatgtcatattacccactggtgcagagacttggctttgatgagaacttcctggat
gtgaccgagatggtggacaccaaggtgaagcaagctccatccacagatttaaccttcagt
ggtcatatttacaacgaggaatcccttgcagtatatgcgagtgactacccccgactagcc
attgggtctcatattgctgctgaattgagagaggccatcaagagcaaccttgggctcact
tcctgtgcaggagttgcaacaaataagttgcttgccaagctggtgtcaggcaccttcaag
ccaaaccagcagaccattcttctgccagagagcactgcagacataatgggaagcttaagt
ggactgcgtaaagtgcctggcataggacacaggacaggtgagaggctgaaggctcttgga
cttatcacagtgagagacctgcagtgcatccctccagctgagctagccagggagtttgga
gctgccagtgctcagcacctgcagaacctggcccaagggatcgataactcccctatcacc
cctgctggacctccacagtcacttagtgatgaagactccttcaaaaagatgtccttaaca
acagaggttctcaaaaaaattgaggacctcttgataagcctcatggagagaatgtttaaa
gatggaaggcagccgtccaccttccgcctgacaatcagacgctttttggcaacaaaccgc
tatttcagccgcgagagtagacagtgccccatacccaatcacatcggacagaagatcaca
acaggaagttgcgatgcactagcccagctggtcaacattgccatgaagctgtttcacaaa
atgattgacaccaactccccctttcacctcacactgataaacgtgtgcttcagcaacctg
cagtcaaagagtgatggcagaggctccataacatccttcttcacacagaggtcacccaaa
aaagtgctgtccgtgtctcagcaacagaattccaccctggagaatctgagtgttaaagga
tctagcagcagtcttcctggcgactgcactgcctttgcgaatgactcgtctggcaagagg
gactctcagagcacatcatccaaaccatcagagcaaaagaagcctccaccgctgaggcac
attgggactcctctgtctgtaaaatcgccagtgcctgagtggacccaggtgccagttaat
tcaaatgagcaccacagacccagtccctcacaggacccagagttcctgcacctgccccct
gatgttgacccagacgtgttcaaacacctcccagagagcatccagaaggagcttctgtct
ggtttctatgcaggagaacatgaggacaggcagggaactagtagtcagtcagccgccgtt
atttcctttcatcagaaactgactgatcagactgaaccacccttgcagcagtcaagcatg
ccaacagactccatcggctcgggtaatggcagtgagtgcgtcaaacagaccactgagcaa
acatttttctttgcacacagagaaagactaagcacatgcactgagcaggaggaaggcaac
aacaggtcgcctgacacggactacccctcaaacgtagaccccactgtgttttctgagctg
cccccagagctgcagcgagaactgctgtcagagtggaggcagcagaagccagtgctgaag
atcccctcaaagaaggtggggaagactgcctccaccaaagacaaaaaagtcgccacgaaa
gctggtcaggcaaacaacttgctgaattactttaaacctgactag
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