Clupea harengus (Atlantic herring): 105902973
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Entry
105902973 CDS
T09045
Symbol
slc6a5
Name
(RefSeq) sodium- and chloride-dependent glycine transporter 2
KO
K05038
solute carrier family 6 (neurotransmitter transporter, glycine) member 5/9
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
105902973 (slc6a5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
105902973 (slc6a5)
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
105902973 (slc6a5)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
105902973
NCBI-ProteinID:
XP_012686112
Ensembl:
ENSCHAG00000000393
UniProt:
A0A6P3W208
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Position
6:22322806..22339694
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AA seq
787 aa
AA seq
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MDFSDQKDMLRQPANSPAGFGSPYQPEGAVGVTTNKPENGHNLPSDSHPAPQPPPVNERK
TFCPTENKPGETDSNKVYGTFKNAAPAVPVHSALHMDSAGTAPPQTDGTTVHGKAMSDPM
ANQGAMNSTTEQNNATGNWTTMSQTTIILGTDGNTSVMPGTVTGEDDDDDESGDENKARG
NWSSKMDFILSMVGYAVGLGNVWRFPYLAFQNGGGAFLIPYLTMLCIAGIPIFLLEVAIG
QFSSQGPVSVWKAIPALQGCGIAMLIISVLIAIYYNIIMCWTLYYLFASLKGSLPWANCK
NEWNTMDCKDKDMLLLDTCILRDRNITSIKNSTYCLSANAVGNLSRLLNMTTNENKTYVS
PSEEYFKYNVLHISKGIEFPGDIRWPLALCLFLAWVIVYFSLAKGIKSSGKVVYFTATFP
YVVLVILLIRGITLPGAFDGIMYFITPKWEKLIDAKVWKDAATQIFFSLSAAWGGLITLS
SYNKFHNNCYRDTIIVTCTNSATSIFAGFVIFSVIGFMAHELKVPIDKVADEGPGIAFVV
YPEALTRLPLSPFWAIIFFLMLLTLGLDTMFATIETIVTSVSDEFPAYLRKHKPQFTLVC
CFCFFILGFPMITESGMYMLQLVDTFAASYSLVIIAICELVGISYIYGLQRFCEDIEMMI
GFQPNKFWRICWAFVTPSILTFILGISLYQWKGMTYEDYTYPGWSMVMGWLMVICSVIWI
PIMFSIKMYLAPGSFRERLKLVCSPQPDWGPFLLKHRGERYKNMIDPLGTNSLGIKLPPK
DFQLSAK
NT seq
2364 nt
NT seq
+upstream
nt +downstream
nt
atggatttctccgatcaaaaagatatgttgagacaacctgcgaacagtcccgctggtttt
ggctcaccttaccagccggaaggggcggttggagttacaactaacaaaccagagaatggt
cataacctaccttccgactcgcatccagcgccacaaccaccgccggtcaacgaaaggaaa
actttctgtccaacagaaaataaacctggagaaacggattccaataaggtctatgggacg
tttaaaaacgcggcaccagcggtgcctgttcattctgctctccacatggattccgctggt
accgcgccgcctcagacggatggtacaaccgttcacgggaaagctatgtccgatccaatg
gctaatcaaggtgccatgaatagcactacggagcaaaacaatgccaccggcaattggaca
actatgagccagaccaccatcatactgggcacagatggcaatacgtctgtaatgcctggc
acagtaaccggggaggatgacgatgatgacgagagtggagatgagaataaggccagggga
aactggtctagtaaaatggatttcatcctgtctatggttggctatgcagtgggcttggga
aatgtgtggagatttccctaccttgctttccagaatggaggaggtgcttttttgattcca
tacctgacaatgttgtgcatcgctggaattccgatatttttattggaggtagccataggt
cagttttccagtcaaggcccagtgtctgtatggaaagccatcccagcactgcaaggttgc
gggattgccatgttgataatatctgtcttgatagccatatactataatattataatgtgc
tggacactgtactacctgttcgcttcgttgaagggctcactaccatgggctaactgtaag
aatgaatggaacacaatggactgtaaagacaaagacatgcttctattagatacgtgtatc
cttcgggataggaacattacatctataaagaattccacgtattgcctgtctgctaatgcc
gttggcaatctgagcagacttttaaacatgacaacaaatgagaacaaaacatatgtaagt
cccagcgaggaatacttcaaatacaatgtgctgcacatttccaaaggaattgaatttccg
ggtgatattcgttggcctttggccttgtgcctgtttctggcgtgggtcattgtttacttc
tctttggctaaaggaattaagtcatcaggaaaggtggtgtacttcacggccacattcccc
tatgtggttctggtcatcctccttatccgaggtattactctgcctggtgcattcgatgga
atcatgtacttcatcacgcctaagtgggagaagctcatcgatgcaaaggtttggaaggat
gctgcaacccagattttcttctcgttgtcggctgcctggggtggactcatcacactctcc
tcctacaacaagttccacaataactgctatagggataccatcatagtgacctgcaccaac
agtgccactagtatatttgcaggcttcgtcatcttttctgtcattggcttcatggcccac
gagctgaaggtgcccatagacaaggtggcagatgaaggtcctggcatagcctttgtggtt
tacccagaagccctcaccagactgcccctgtcgcctttctgggccatcatcttcttcctc
atgctgctcacgctggggctggatactatgtttgccaccattgagaccatcgtgacgtct
gtgtccgacgagttccctgcatacctgcgcaaacacaagccccagttcacgctggtgtgc
tgcttttgcttcttcatcctgggattccccatgataacagagagtggaatgtatatgctg
caacttgttgatacctttgcagcctcttactctctggtcatcattgccatatgtgagctg
gttggaatctcatacatatacgggttgcagaggttctgtgaagacattgaaatgatgatt
gggttccagccaaacaagttttggaggatctgctgggcttttgtcacgccatccattctg
acatttattctgggcattagtttgtaccagtggaaggggatgacgtatgaggactacacc
taccccggctggtccatggtgatgggatggctcatggtcatctgttctgtgatttggatc
cccattatgttctccattaaaatgtatctcgcccccggatccttcagggagaggctgaag
ctagtgtgttcccctcagcccgactggggccccttcctgctcaagcaccgcggcgagcgc
tacaagaacatgatcgacccgctgggcaccaactccctggggatcaaactccctcccaag
gacttccagctgtccgccaaatag
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