Clupea harengus (Atlantic herring): 105902975
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Entry
105902975 CDS
T09045
Name
(RefSeq) cytoskeleton-associated protein 5-like isoform X1
KO
K16803
cytoskeleton-associated protein 5
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
105902975
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
105902975
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
105902975
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
XMAP215
105902975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XMAP215_CLASP_TOG
CLASP_N
CEP104-like_TOG
HEAT
TOR1L1_N
HEAT_EF3_N
HEAT_ECM29
Sds3
MmeI_N
TAN
DUF1071
Glyco_hydro_4
PAS_6
Motif
Other DBs
NCBI-GeneID:
105902975
NCBI-ProteinID:
XP_012686115
Ensembl:
ENSCHAG00000009275
UniProt:
A0A6P8F9V9
LinkDB
All DBs
Position
6:complement(22564905..22582230)
Genome browser
AA seq
2009 aa
AA seq
DB search
MGDDSEWMKLPADQKCEHKVWKARLHGYEEVLKLFPTICDEKSPEWGKYIGIIKKFVTDS
NVVAQLKGLEAALAYIENAHVASRTAGEVVSGVVSKVFNQPKARAKELGKEICLMYIEIE
KAEAVQEELLKGLDNKNPKITVTCVETIRKALSEFGPKVVTLKPVVKVLPKLFESREKAV
RDESKLLAIEVYRWIREAVRPGLQNINSILLKELEEEWAKLPASAPRQSRFLRSQQDLKA
KHEQQQQQLKEAGGGGDEADGEDVEDDAPPVDPYEHLEAVEILSKLPKDFYDKIEAKKWQ
ERKEALDALEALVKNPRIESGDFGELLRALNKVVGKDSNVMLVTLAAKCMAGLATGLRTK
FGTYAGHVVPTILEKFKEKKPLVVQALQEAIDAAFLSTTLQNLSESVLSVMDNKNPSIKQ
QTSLFLSRCFRRCTAANLPKSLLKPFCVALLKQVNDSAAEVRDAAFEALGTAMKVLGERA
VNPFLADLDKLKVDRIKECADKVELAGGKAGAAAGKEKPPPKAPTAPPKKVPAAAPATTK
KAKPTAAGGGAKKNVAKKAEAKETVEAELSPEVCEERAAAVLPASCLQLLDSANWKERLA
SMEEFLKAVDCMEPSEMPCQALLRMLAKKPGWKETNFQVMQLKVRVVATVAQRGSFSKTS
ALAVLDALVEKIGDVKSGAKAKEALSVIAEACSLPWTAEQAVSVAFVQKNPKIQAETLSW
LTNAIKEFGFAGINVKSFINNVKTALGASNPAVRTAAISLLGVMFLYMGAALRMFFEDEK
AALLTQIDSEFEKMKGQSAPAPIRGCSQKAAGDLAADEADGPNEQEGGAGDVVDLFPRAD
ISDKITSDMVSKIGDKNWKIRKEGLDEAAAVISEAKFIKPNLGDLPLALKGRLSDSNKIL
VMQSLALLQQIATGMGPALKQHVKGLGFPIITVLADSKSAVRASALTTLNAWVEQTGVKE
WLEGEELADELKKENPLLRQELLGWLAEKLPTLRSVPSDLALCVLPLYACLEDRNADVRK
KAQEALPTFMMHLGFDKMNKATGKLKTASKDPVSAMLEKARTLMPAKPAAPAKSAPAKSA
VATKPASEPGSTKPQPTQVEHEAPEAKKVKSGSGDKTKRQSQEMNKSASSMDGSFNDSKN
SSSGKGVKRKNAAGKKPAGKAAAEEDKSGPLFILVSNGKEQRIKDEKSLKVLKWNFQTPR
EEYIEQLKAQMTPCVAKWLLEELFHSDFHQHIKAVGAMIENLQEEKEVTKGCLDLILKWF
TLRFFDTNTSVLMKALEYLKLLFMALSKEDYHLSDHEAMSFVPYLVLKMGESKDVVRKDV
RAILEMLCKVYPASKLFPFLMDGTKSKNSKQRTECLEELGSLISSFGMSVSQQHGNKSLK
EIAVHIGDRDTSVRNAALNTVVIAYNTCGEQVYKLIGNLNEKDLSMLEERIKRSAKAPAA
AKPVVEKVRRNSIRKPVHEEAPKVSVPEPQALASVPEEFKLDLSLFEDDMGDVVPPDLVQ
HNLDVLLEHTQVPEPKLRPLPTHYEDQQGSTDSTINFVIAQMASMDMNTSIQALSQLDEV
LRREGKAEVMAGHVDQFLSVVLMQLRWLSSHMGDEQLPRHDVFRLYSCLLGTMLSLMAVD
PVREASAAMLKDLTHALILLMLDPRLEKGEDGPQVIRTVHVLLAQLLQKADQTNILSAMI
IELKEVLATPVSSAFADMVMKCHWRLIKFLPEKIDQLNLDRVLLDIHNVMKSFPRSKHSH
LKSDMPQRTIKTLLHSLCRLVGPRILNHLTLIEDKKASELENHLKKVTNDKDGAHSKKSR
TNETLDEIFKKIVSTENSKEGLTKLLHFKKKNPHTDLSAYLKKLPTNLQGLVENGLKAVN
EEKETRARSQCPTSDPLKSTTVGCPQLSQAVSNPSSSAALQTPAYFQERLQILKQRWGQE
NTTQGDQLPEEERPAPTALPSKPVVGSSMELIQSKLSQLQEARELIRREAAPQTSSAPQT
SSAPAGPRGPPPNLSELMMRLERIKANKT
NT seq
6030 nt
NT seq
+upstream
nt +downstream
nt
atgggggatgacagtgaatggatgaagctgccagcagatcagaagtgtgaacataaggtt
tggaaagccagactccatggctatgaagaggtgttaaaactatttcccacaatatgtgat
gagaagagtccagagtggggcaaatatattgggataataaagaaatttgtcacagattca
aacgtggtggcccagctcaaaggactggaggctgctttggcatatattgagaatgcacat
gttgcgtcaaggactgctggtgaggtggtgtctggggtggtcagtaaagtgtttaaccag
cccaaggcccgagccaaagaacttggcaaggagatttgcctgatgtacattgagattgaa
aaggcagaggcagttcaggaagaactgctaaaaggtctggacaacaagaaccccaaaatc
acagtgacctgtgtggagacgataagaaaagcactcagtgaatttggcccaaaagtagtc
actctgaagccagttgtgaaagttctgcccaaactctttgagtctcgagagaaggctgtc
agggatgaatccaaactccttgccattgaagtgtacagatggatccgggaagcagtgcgg
ccaggccttcagaacatcaactccattctgttgaaagagctagaggaggagtgggcgaag
ctgccagcgtcggcgcccagacagagccgcttcctgcgctcacagcaggacctgaaagcc
aagcacgagcagcagcagcagcagctgaaggaggccggaggaggaggagacgaggctgat
ggtgaagatgttgaagatgacgctcctccagtagacccttatgagcaccttgaggccgtt
gagatcctctctaaactccctaaagacttctacgacaaaattgaggcaaagaaatggcaa
gagaggaaggaggccctggatgcactggaggccttggtcaaaaatcccagaattgagagt
ggagattttggtgaactgcttcgagccttgaataaggttgttgggaaggacagcaatgtc
atgctggtgactctcgcagccaaatgtatggctggactagccacaggactcaggacaaag
tttggaacatatgctggtcatgtggtgccaactattttagagaagttcaaggagaagaaa
cctctggtggttcaagcattgcaggaagcaatcgatgctgctttcctctctaccacgctt
cagaatctgagtgagagtgtcctatctgtgatggacaacaagaacccctccatcaagcaa
caaacttctctcttcctgtcccgatgttttcgccgctgcactgcagctaatctgccgaaa
agcctgctgaaaccattttgtgttgcactcctcaagcaagtgaatgacagtgcagctgag
gttcgagatgccgcttttgaggctcttggaacagccatgaaggttttgggtgagcgggcc
gtaaaccccttcctcgcagacctagacaaactcaaagttgacaggataaaggagtgtgcc
gataaagtggagctagccggagggaaggcaggtgctgctgctgggaaggagaagccccct
ccaaaggcccccacggccccacctaagaaggttccagcagctgcgccagcaaccaccaaa
aaggcaaagccaacagcagcaggaggaggagccaagaaaaacgtggccaaaaaagcagag
gccaaggagacagtggaggctgagctgtctcctgaggtgtgtgaagagagggctgcagct
gttcttccagcctcctgtttgcagctgctagacagcgccaactggaaggagagattggcc
agcatggaggaattccttaaggctgttgactgcatggaaccgagcgagatgccctgccaa
gctctcctccgcatgttagccaagaagcccggatggaaggagaccaacttccaggtgatg
cagctgaaggtgcgggtggtggccacggtggcacagaggggctccttctcgaaaacctcc
gctctggccgtgctggatgccctggtcgagaagatcggggatgtgaagagcggcgcgaag
gccaaggaggccctgagtgtcatcgcagaagcctgttcactgccatggactgctgagcag
gctgtctcagtggcctttgtccagaagaaccccaaaatccaagcggagaccctgagctgg
ctgactaatgccattaaggagtttgggtttgcaggcataaatgttaagtccttcatcaat
aatgtcaagacagccctgggagctagcaatcctgctgttaggacagcggccatttctctg
ctgggtgtgatgttcctctatatgggagctgctctgcggatgttctttgaagacgagaag
gcagccctgctcacgcagatcgactcagaatttgaaaagatgaagggccagtccgcccct
gcccccattagaggctgctctcagaaagcagcaggtgatctggcggcagacgaggcagac
gggccgaatgaacaggagggaggtgcaggtgatgttgtggacctcttcccaagggctgat
attagcgataagatcacttcagatatggtgtcaaagattggtgacaaaaactggaagatc
cgcaaggagggacttgatgaagctgcggcagtcatctctgaggccaagttcatcaagccg
aacctcggcgacctaccgctggccctcaaaggcagactctctgactcgaacaagatactg
gtcatgcagagtctggcactcctgcagcagatagccacaggcatgggtcctgccctgaag
cagcacgttaagggcctgggcttccccatcattactgtgctagcagacagcaagagtgca
gtgcgtgcctccgctctgaccaccctgaacgcttgggtagagcagacgggtgtgaaggag
tggctggagggcgaggagcttgctgacgagctgaagaaggagaaccccctcctccgacaa
gagctgctgggctggctggcggagaagctgcccaccctgcgctccgtgccctcggacctg
gccttgtgcgtgctgcccctttacgcctgcctggaggaccgcaacgcggacgtccgcaag
aaggcccaggaggccctgcccaccttcatgatgcacctgggcttcgacaagatgaacaaa
gccacaggcaaactcaagacagcctccaaagacccggtgtcggcaatgcttgagaaggcc
agaactctcatgcctgctaagcctgcagctccggctaaatcggctccagctaaatctgct
gttgcaaccaaacctgcttcagagccaggttcaactaagccacagccaactcaagtggag
catgaggcccctgaggctaagaaagtcaagtcaggatctggagacaaaacaaagagacaa
tcacaggagatgaacaagagcgcgagcagcatggacggtagtttcaatgactctaaaaac
agctccagtggaaagggtgtcaagcggaagaatgcagctggtaagaaacccgcaggtaag
gcagctgcggaggaagacaaatcgggccccctgttcatcctggtgtccaacggcaaagag
caaaggattaaggatgagaagagtctcaaggtgctgaaatggaacttccaaactccgcgg
gaggagtatatcgagcagctgaaggctcaaatgaccccctgtgtagccaagtggttgctg
gaggagctctttcattcagacttccaccagcacatcaaagctgtcggagccatgatcgag
aacctgcaggaggaaaaggaggtgaccaaaggctgtctggatctaatcctcaagtggttc
acactgcgcttctttgacaccaacaccagtgtgctaatgaaggccctggagtacctcaag
cttcttttcatggccctcagcaaggaagactaccacctcagtgaccacgaggccatgtcg
tttgtcccctacctcgtgctaaagatgggcgagtctaaagacgtggtgcgcaaggatgtg
cgagccatcctggaaatgctgtgcaaggtttaccctgccagcaagctcttccccttcctc
atggatggtaccaaatccaagaactcgaagcagaggacagagtgtctggaggagctgggc
tcccttatctcctcgttcggcatgtcggtctcccagcagcatggcaacaaatcgctgaaa
gaaatcgctgtgcacatcggagaccgtgacacatctgtccgtaacgccgccctcaacacg
gtggtgatcgcctacaatacctgtggagaacaggtttacaaactgatcggcaatctgaat
gagaaggacctgagcatgctggaggagaggatcaagcgctctgccaaggcccctgcagcc
gccaagccagtggtggagaaggtcaggaggaacagcattcgcaagccagtccatgaagag
gcccccaaagtcagtgtgccagagccacaggctctcgcctcagtgccagaggagttcaag
ctggacctgtccctgtttgaggacgacatgggggacgtggtgccgcctgaccttgtccag
cacaatcttgatgttctcctggaacatacgcaggtcccagagcccaagctgcgtccgctc
cccacccactatgaggaccaacagggcagcacagactccaccataaacttcgtcatcgct
caaatggccagcatggacatgaacacaagcatccaagccctgtcacagctggatgaggtc
ctgcggcgggagggcaaggcggaggtgatggccggtcacgtggaccagttcctcagcgtg
gttctcatgcagctgcgctggctctccagccacatgggggacgaacagctgccccgtcac
gacgtcttcaggctctatagctgcctcctcggcaccatgctctcgttgatggcagtggac
ccagtgcgtgaggcctcagcggctatgctgaaggacctgacccatgctctgatcttgctc
atgctggatccccggctggagaaaggggaggacggcccccaggtcatccgcacggtgcat
gtactccttgcccagctgctgcagaaggcagaccagaccaacatcctcagtgcaatgata
atagaattgaaggaagtccttgcaacccctgtatcttcagcgtttgcggacatggtcatg
aagtgtcactggcgacttattaagttccttcctgagaagatcgaccaactcaatctagat
cgtgtactcttggacatccacaatgtcatgaagtcctttcccagaagcaagcacagtcac
ctgaagagtgacatgccacaaagaaccattaaaaccctgcttcactccctctgtagactg
gtgggacccaggattttgaaccatttgactttgattgaggacaaaaaagcatctgaattg
gagaaccatctgaagaaggtgaccaacgacaaagatggcgctcattcgaagaaatccagg
acaaacgagactcttgatgagattttcaagaagatcgtttccactgagaattcaaaagag
ggcctaactaagctgctgcactttaagaagaagaacccgcacacagacctgagtgcctac
ctgaagaaactgcccacaaacctccaagggctagtagagaatggactgaaggcagtgaat
gaggagaaggagactagggctcggagtcagtgccccacctcagatcctttaaagtccacc
accgttggctgtccccagctttcacaagcggtctcaaatcccagctccagcgcagcactg
caaacccctgcttacttccaggaaagactccaaatactaaagcagcgctggggccaggag
aataccacccaaggagatcagctgcctgaagaggagaggcccgcgccgactgcgcttccc
tccaagccggtggttggctcgtccatggagctgatccagagcaaactatcccagctgcag
gaggcccgggagctgatccggcgagaggctgcaccccagacttctagcgcaccccagact
tccagcgcacctgccggtcccagagggcccccgccaaacctcagcgagctcatgatgaga
ctggaaagaataaaggccaataaaacatga
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integrated database retrieval system
