Clupea harengus (Atlantic herring): 105902990
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Entry
105902990 CDS
T09045
Name
(RefSeq) carbohydrate sulfotransferase 1
KO
K01022
keratan sulfate 6-sulfotransferase 1 [EC:
2.8.2.21
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00533
Glycosaminoglycan biosynthesis - keratan sulfate
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00533 Glycosaminoglycan biosynthesis - keratan sulfate
105902990
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105902990
Enzymes [BR:
char01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.2 Sulfotransferases
2.8.2.21 keratan sulfotransferase
105902990
Glycosyltransferases [BR:
char01003
]
Unclassified
Sulfotransferases
105902990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sulfotransfer_1
Sulfotransfer_3
Motif
Other DBs
NCBI-GeneID:
105902990
NCBI-ProteinID:
XP_012686131
Ensembl:
ENSCHAG00000010152
UniProt:
A0A6P3W0E0
LinkDB
All DBs
Position
6:22902685..22907245
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AA seq
422 aa
AA seq
DB search
MQCSWKAVILLALASIAIQYTAIRTFTSKPFHLCPMPSPQNCGLGAQDTDPSFERGCEEY
PYFIYNASRKTHILVLATTRSGSSFVGQLLNQHSDVFYLFEPLYHVQTALIPRLSHSRNT
ADRRVMLGASRDLLRSLYGCDLHFLESYIKPPPANHTTDKLFRRGASKALCSQPVCDAFG
PGDANVEEGDCVKKCASLNMTLAAESCRERRHTAIKIVRVPEIGDLRALVEDPRLNLKVI
QLVRDPRGILSSRIETFRDTYRLWRIWRATGRKPYNLDLTQLTMVCDDFLSSVSTGLSHP
YWLKGKYMLVRYEDLARNPLQKTKEIYDYLNLPMDKNVVDWIQANTRGSSELSAKHKYGT
VRDSAANAESWRLKLSFEMVDYTQTVCQKILNILGYKSVKSAEELKNMTLSLVQDKSFVP
FS
NT seq
1269 nt
NT seq
+upstream
nt +downstream
nt
atgcaatgttcctggaaggctgtgatcctgctagccttggcctccattgccatccagtac
acagccatccggactttcacctccaagccctttcacctctgtcccatgccaagcccccag
aactgtggcctgggagcccaggacacggacccgtcttttgaacgtggctgtgaggagtac
ccctacttcatctacaatgcctcccgcaaaacccatattctggtgctggccaccacccgc
agcggctcctcttttgtgggccagctgctcaaccagcactcagatgtattttatctcttt
gagcctctctaccacgtccagacggcgctgattccacgcctctctcatagtcggaacaca
gcagaccgcagggtgatgctcggggccagccgcgacttgctgcggagcctctatggctgt
gaccttcactttctggagagctacatcaagcctcccccggccaatcacaccacggataag
ctgttccgccgcggagcgagcaaggcgctgtgctcccagccggtgtgtgacgctttcggc
ccgggggacgccaacgtggaggagggcgactgcgtaaagaagtgcgcgtccctcaacatg
acgctcgccgccgagtcttgccgcgagcggcgtcacacggccataaagattgtgcgcgtg
ccagaaatcggtgacctgcgggccctggtggaggaccctcggctcaacctgaaggtgatc
cagctggtgagggacccccgggggatactctcctctcggattgaaacgtttcgggacaca
taccggctgtggaggatctggagggctacagggaggaagccctacaacctggaccttact
cagctgactatggtgtgcgatgacttcctcagctctgtgtccacgggcctcagccacccg
tactggctgaaagggaagtacatgctagtccgatatgaggacttagcacggaaccctctg
cagaagactaaggagatctatgactaccttaacctgccgatggacaagaacgtggtggac
tggattcaggccaacaccagagggagtagtgagctttcggccaaacataagtacggtacg
gtgagggactctgcagcgaacgccgagagttggaggctgaagttgtcctttgagatggtg
gactacacgcagacagtgtgtcagaagatccttaacattcttggctacaaaagtgtcaag
tctgcagaagaactcaaaaatatgactctttcactcgtgcaggacaaaagttttgtaccc
ttttcataa
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