Clupea harengus (Atlantic herring): 105902993
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Entry
105902993 CDS
T09045
Symbol
lrp4
Name
(RefSeq) low-density lipoprotein receptor-related protein 4 isoform X1
KO
K20051
low-density lipoprotein receptor-related protein 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
105902993 (lrp4)
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
105902993 (lrp4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
Vgb_lyase
cEGF
EGF_LRP2
EGF_CA
Motif
Other DBs
NCBI-GeneID:
105902993
NCBI-ProteinID:
XP_012686132
Ensembl:
ENSCHAG00000006035
UniProt:
A0A6P3W0H1
LinkDB
All DBs
Position
6:complement(22584836..22672052)
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AA seq
1917 aa
AA seq
DB search
MNLAVLCGTLLTMMLLNPGVLGSTECSCGRNHFTCAVSPFGECTCIPAQWQCDGDNDCGD
HSDEDGCMLPTCSPVDFHCDNGKCIRRSWVCDGDNDCEDDSDEQDCPPRECEEDEFHCQN
GYCIRSLWHCDGDNDCGDNSDEHCEMRKCSDKEFRCSDGSCIAEHWYCDGDTDCKDGTDE
ENCPSDVTTPSCSAEEFQCAYGRCILDIYHCDGDDDCGDWSDESDCSSHQPCRSVEFMCS
SGMCINAGWRCDGEFDCDDQSDEKNCTTSMCTADQFRCASGRCVRLSWRCDGEDDCADGS
DEDGCEKTETPPCASDQFMCGNGRCIGQRKVCNEVNDCGDGTDEDPHQDCRPRSSEGNCN
LNNGGCSQKCQMARGLVECTCHTGYRLTEDRKSCEDVDECAEEGYCSQGCTNTEGGFQCW
CVQGYELRPDKRTCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHNQ
ELVFWSDVTLDRIMKANLNGSNVEEVVSTGLESPGGLAIDWIHDKLYWTDSGTSRIEVAN
LDGTHRKVLLWQSMEKPRAIALHPIEGKIYWTDWGNTPRIEYANMDGSNRKIIADTHLFW
PNGLTIDYASRRVFWVDAKHHVIERSDLDGQNRKAVISQGLPHPFAITVFEDSLYWTDWH
TKSINSANKFTGKNQEIIRNKLHFPMDIHTLHPQRQPAGGLNRCGNNNGGCSHLCLPSNK
TYTCECPTGFKKVDNHNCALSLDKFLLFARRTDIRRISFDTEDMSDVVIKLADVRNAVAL
DWDASYGHIYWTDVTTDSINRALWDGSKQEVVVDTSLESPAGLAIDWVTNKLYWTDAGTD
RIEVSNADGSMRTVLIWENLDRPRDIVVDPIGGLMYWTDWGASPKIERAGMDASNRIVII
STNLTWPNGLAIDYQTERLYWADAGMKTIEYGNFDGSDRQILISSQLPHPFGLTLHEDRI
FWTDWHSKSIQSANKLTGLDRATLVENLENLMDIHMFNRHRSSVRTPCAVNNGGCSHLCL
LAPPPKGSSCACPTGINLQVDGKTCAHGMSSFLIFARRTDIRMVSLDIPYFADVVLAVNG
SMKNTIAIGVDPKEGKVYWSDSTLKKITRANINGTGQEDIIATGLMTTDGLAVDSLGRKI
YWTDTGTNRIEVANMDGSMRKVLVWQNLDSPRAIALYHEMGYMYWSDWGEHAKLERSGMD
GSDRVVLISNNLGWPNGLAIDKAGSQLLWADAHTERIEVADLNGSNRRILVSPVQHPYGL
TLLGPHIYWTDWQSRSIQRADKTTGTNTITVRSNLPGLMDIQAVDRERPLGFNKCSRRNG
GCTHLCLPRPNGTSCACPTGILLKPDGRSCDNSPETYLLFSNRVSVRRISLDTNDHTDVH
VPVPELHNVISLDYDSVDGKLYYTDVSLDVIRRSNLDGTGMETVISQGLKTTDGLAVDWV
ARNMYWTDTGRNTIEVARLDGTARKVLINNSLDEPRAIAVFPSKGYLFWTDWGHIAKIER
ACLDGSDRKVLINTDLGWPNGLTLDYDTRRIFWVDAHLDRIESSDLNGNLRQILVSPVSH
PFALTQLKPVSSPLTPFSRISQQDRWIYWTDWQTKSIQRVDKHAGRNKETVLANVEGLMD
IIVVSPQRQSGTNHCGVNNGGCTHLCFAKTNSFACACPDEPDDRPCSTISGYVPAVPSGG
VNPITRAPNKNPKLPTEKPQRGHPVVNCTDKSLSVEGCIESNVVTAPHGEGLHISYVIGG
ALTILAILILIAAFIIYKHKKSKFADPGVSNLTYSNPSYRTSTQEVKIETTQKPPIYNQL
RYKKEATCDNNYTKEKIRIVEGVCLLSGEELYWEDLKQLKMCRGGGLHACMRTDTVSLQA
SSASLDDGETEQLLQEEQSECSSINTAPATTPQRHASTHLPDTGWAPNRKPSTESEV
NT seq
5754 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttgcggtgctttgtggtactctgttaacaatgatgcttctcaatccaggcgta
ctgggaagcacggagtgttcatgtggccggaaccatttcacctgtgcggtgagtccattc
ggggagtgtacctgcattcctgctcagtggcagtgcgacggggacaacgactgcggagac
cacagtgatgaggatggctgcatgttacccacctgctctccagtagacttccactgtgac
aacggcaagtgcatccgccgctcgtgggtgtgtgacggggacaacgactgcgaggatgac
tctgacgaacaggactgccctccccgagagtgtgaggaggatgagttccactgccagaat
ggatactgcatccgcagcctgtggcactgcgatggtgacaacgactgcggggacaacagt
gacgagcactgcgagatgaggaaatgctctgataaggagttccgctgctctgatgggagc
tgcatcgctgagcactggtactgtgacggagacacggactgcaaagatggaaccgatgag
gagaattgcccttctgacgtcacaactcccagctgcagtgccgaagagttccagtgtgcg
tacggccgctgcatcctagatatttatcattgcgacggggatgatgactgtggagactgg
tccgatgagtctgactgctcctcccaccagccttgccgttcggttgagtttatgtgcagc
agtgggatgtgcatcaatgccggctggaggtgcgatggcgagtttgactgtgacgaccag
tctgatgagaagaactgcaccacgtccatgtgcacggcagatcagtttcgttgcgcgtcg
ggccgctgtgtgcggttgtcatggcgatgtgacggtgaagatgactgcgctgacggcagt
gatgaagatggctgtgaaaagacagagaccccaccctgtgcctcagatcagttcatgtgt
gggaatggccgctgcatcggccagaggaaggtgtgcaacgaggtcaacgactgtggagac
ggcaccgacgaagacccgcaccaagactgccgccctaggtccagtgaagggaactgtaac
ctgaacaacggcggctgctctcagaagtgccagatggcgcggggcctggtcgagtgcact
tgccacactggctacaggctgacggaggaccgcaagtcatgcgaagatgtggacgagtgt
gcagaggaaggctactgcagccagggctgcaccaacacggaggggggtttccagtgctgg
tgtgtacagggttacgagctgaggcctgacaagcgcacctgcaaagcgctgggtccggaa
ccggttctgctgtttgccaatcgcatcgacatccgccaggttctgcctcaccgctctgag
tacacgctgctgctgaacaacctggagaacgccatcgccctggacttccaccacaaccag
gagctggtgttctggtccgatgtgacgctggaccgcatcatgaaggccaacctgaatggc
agtaacgtagaggaggtggtgtccactggcctggagagcccaggtggtctggccattgac
tggattcatgacaagctgtactggacggactctgggacgtcacgcatcgaggttgccaat
ctggacgggacacaccgcaaggtcctcctgtggcagagcatggaaaagccccgggctatt
gcccttcaccccatcgaggggaagatctactggacagactggggaaatacccctcgcata
gagtacgccaacatggatggctcaaaccgcaaaataatcgcagatactcatctattctgg
cccaacggactgaccattgactacgccagccgccgcgtcttctgggtggatgccaagcac
cacgtcatcgagcgctctgatcttgatggacagaaccggaaggctgtcattagccaagga
ctccctcatccctttgccatcactgtgtttgaggacagcctgtactggacagactggcac
accaagagcatcaacagcgccaacaagttcactggcaagaaccaggaaatcatccgcaac
aagctgcacttccccatggacattcacaccctgcatccccagaggcagccagcaggtggg
ctaaatcgctgtgggaacaacaatggaggctgcagtcacctgtgtctccctagcaacaag
acctacacctgtgaatgccccacaggcttcaagaaagtggacaaccataactgtgccctg
agtcttgacaagttcctgctttttgcccgaaggacggacatccgtcggatcagctttgac
acagaggacatgtccgatgttgtcattaaactggcagatgttcgcaacgccgtggccctg
gactgggatgccagctacggccacatctactggactgacgtcaccacagactcaatcaac
cgagcgctgtgggacggctccaaacaggaggttgtggttgacaccagccttgagagccct
gcaggtctggccattgactgggtgactaataaactgtactggactgatgcaggcacagac
aggattgaggtttccaatgcagacggcagcatgcgcactgtgctaatttgggagaatctg
gatcgcccaagggacattgttgtggatcccataggaggattgatgtactggactgactgg
ggagccagccctaaaatcgagcgtgctggaatggatgcatccaatcgcatcgtcatcatc
tccaccaatctgacctggcccaacggcctggccattgactaccaaacagaaagactgtac
tgggcggatgccggcatgaagaccatagagtatggcaactttgacggttctgacagacag
atattaattagtagccagctgccacacccgtttggcttgacgcttcacgaggacaggatc
ttctggacggactggcattccaagagcatccagagtgccaacaagctgacgggtctggat
cgtgccacactggtggagaacctggagaacctcatggacatccacatgttcaaccgccat
cgctcgtcagtgcggaccccgtgcgctgtgaacaatggaggttgcagccacctgtgtctc
ctggctccccctcccaaaggctccagttgtgcctgtcccactggcatcaacctccaggtg
gatgggaagacctgtgcccatggaatgagcagcttcctgatatttgctcgacgcacagac
atccgtatggtttctctggacatcccctactttgctgatgtggtcctggctgtcaacggc
tccatgaagaacaccatcgccattggggtggaccctaaagagggtaaagtgtattggtca
gacagcacactgaagaaaatcactagagccaacatcaatgggacaggacaggaggacatc
attgcaactgggctcatgacaactgacgggctggctgtagactccctgggccgcaagatt
tattggacagacaccggcaccaatcgcatcgaagtcgctaatatggatgggtccatgcgt
aaagtcctggtgtggcagaacctggacagtcctcgtgctattgctctctaccacgagatg
gggtacatgtactggagtgactggggtgagcacgctaagctggagaggtctggaatggat
ggctccgaccgggtggttctcatcagtaataatttgggctggcctaacggactggcaata
gacaaggccggctctcagctcctgtgggccgacgctcacactgagcgcattgaagtggcc
gacctgaacggctccaaccgccgcatcctggtgtctccggtgcaacacccgtacgggctg
accctcctcgggccgcacatctactggacggactggcagagccgcagcatccagagagca
gacaagaccactggcaccaacaccatcaccgtcaggtccaacctgcccgggctcatggac
atacaggctgtggaccgtgagaggcctctaggttttaataagtgtagtcggaggaatggc
ggctgcacccatctctgtctgcctcggcctaatggcacgtcctgtgcctgtcccaccggc
atcctgctcaagccggacggccgctcatgtgacaacagccccgagacctacctgttgttc
tccaaccgcgtcagtgtgcgccgcatctccctggataccaacgaccacacggacgtgcac
gtgcccgtgccagagctgcataacgtcatctccctggattacgacagcgtcgacggcaag
ctctactacactgacgtttcgctagatgtcatcaggcggtctaatttggatggcactggt
atggagacggtgattagccagggactgaaaacgaccgatggtctggctgtggactgggtg
gcccggaacatgtactggacagacacaggccgcaacactattgaggtggcccgtctggat
ggcaccgcaaggaaggttctgatcaacaacagtttggacgagcccagggcaatcgctgta
ttccccagcaaagggtatttgttctggactgactggggtcacattgcaaagatagagcgg
gcatgccttgatggctccgacagaaaagtcctcattaacaccgacttgggctggccaaat
ggcctgacactggattacgacacacgcaggatattttgggtggatgctcacctggacagg
attgagagttctgacctgaatggaaatctcaggcaaatcctggtcagcccagtgtcgcac
ccttttgctctcacacagttgaagccggtctcctccccactaactcctttctcccgcatc
tcacagcaagaccgctggatatactggacggactggcagaccaagtccattcagcgggta
gataagcacgcgggccgcaataaggagaccgtgctggccaacgtagagggcctcatggac
atcatcgtggtgtcaccccagcggcagagtggcaccaatcactgtggggtaaataatgga
ggctgtacacacctgtgcttcgccaagaccaacagctttgcgtgtgcctgccccgatgag
ccggacgacaggccctgctcaaccatctcaggatatgtgcctgctgttcccagtggaggt
gtaaaccccattacgcgtgcacccaacaagaaccctaaacttcccacagagaagcctcaa
cgaggacatccagtggtcaactgcacagataagagcctcagcgtggagggatgcatagag
agcaatgtggtgactgctccacatggtgagggactccatatcagttatgtcattggtggg
gctctgaccatcttggccattcttatactcattgctgcattcatcatatacaagcataaa
aagtcaaagtttgctgacccaggagtgagtaacttgacctacagtaacccatcatacagg
acgtcaacgcaagaagtcaaaatagagacgacccagaaacctccgatttacaatcagcta
cgatataaaaaagaggcgacctgcgacaacaactacaccaaggaaaagatccgcattgtg
gagggcgtgtgcctgctttcgggcgaggagctttactgggaggacctgaaacagctgaag
atgtgccgtggcggcgggctgcacgcctgcatgcgcacggacaccgtctccctgcaggcc
agcagcgcctcgctggacgacggcgagaccgagcagctgctgcaagaggagcagtccgag
tgctccagcattaacaccgccccggccaccaccccccagcgccacgcctccacccacctc
ccagacacgggctgggcccccaaccgcaagccctccacagagagcgaggtctga
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