Clupea harengus (Atlantic herring): 105903001
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Entry
105903001 CDS
T09045
Symbol
large2
Name
(RefSeq) LARGE xylosyl- and glucuronyltransferase 2
KO
K09668
glycosyltransferase-like protein LARGE [EC:2.4.2.- 2.4.1.-]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00515
Mannose type O-glycan biosynthesis
char01100
Metabolic pathways
Module
char_M00872
O-glycan biosynthesis, mannose type (core M3)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00515 Mannose type O-glycan biosynthesis
105903001 (large2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
char01003
]
105903001 (large2)
Glycosyltransferases [BR:
char01003
]
Glycan extension
O-Glycan
105903001 (large2)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_49
Glyco_transf_8
Glyco_transf_24
INO80F
Motif
Other DBs
NCBI-GeneID:
105903001
NCBI-ProteinID:
XP_012686144
Ensembl:
ENSCHAG00000022634
UniProt:
A0A6P3W0H6
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Position
6:23311489..23344459
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AA seq
750 aa
AA seq
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MHCPCRGKLKLLVLSLSSVILLTWLYLLVGNLENGRSLLLSPCLVESTEARLLEREDLES
RVREVEEENRKIRLQLSQSQGLAAQPPEGNYGNQQWVASADTGPEDVENTAEERANHSDC
SRSPTVEKCELIHVACVCAGHNASRDVVTLVKSILFHRRNPLHFHFITDTVAHQILSALF
QSWMVPSVQVSFYDADELKSEVSWIPNKHYSGIYGLMKLTLTKALPSDLSKVIVLDTDIT
FATDIAELWSIFRRFTEKQVIGLVENQSDWYLGNLWKNHKPWPALGRGFNTGVILLYLEK
LRRMGWEQMWRLTAERELMNMLSTSLADQDIFNAFIKQNPVLVHQLPCFWNVQLSDHTRS
EQCYTEVSDLKVIHWNSPKKLRVKNKHVEFFRNLYLTFLEYDGNLLRRELFGCPSQATSE
ITQLQGALEELDEDDQCYEFRRERITLHRVHLYFLQYEYTPTNDNTDVTLVAQLSMDRLQ
MLEAICKHWEGPISLALYMSDAEAQQFLRYAQASEVLKNRKNVGYHIVYKEGQFYPVNLV
RNVALRNANTPYVFLTDVDFLPMYGLYEYLRKSIVQLDMANTKKALVVPAFETLRYRLSF
PKSKAELLSMLDMGTLYTFRYHVWTKGHAPTNYAKWRTATTPYKVDWEPDFEPYVVVRRD
CPEYDQRFVGFGWNKVSHIMELDAQEYDLVVLPNAYMIHMPHAPSFDISKFRSSPSYRYC
LTTLKDEFHQDLSRKYGSAALKYLTAQRNI
NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atgcactgcccgtgccgagggaagctgaagctcctggtgttgtctctgagctctgtgatt
ctgctgacatggctgtacctgctggtgggcaacctggagaacgggcgttcccttctcctc
tccccctgcctggtggagtctacggaggcccggctgctggagcgggaggatctggagtca
cgcgtccgagaagtggaggaggagaaccggaagatccgtctccagctcagccaatcgcaa
ggcctggccgcgcagcctcccgagggtaactatgggaaccagcagtgggtggcgtcagcc
gacacgggtccggaggacgtggagaacacggccgaggagagagctaatcatagcgactgc
tcccgatcacccacggtggagaagtgtgagctgatccatgtggcgtgtgtgtgtgcagga
cacaatgctagccgggatgtcgtcacccttgtcaaatctatcctgttccataggaggaac
cctctgcactttcactttatcacagatacagtggcccatcagatcctgagcgccttgttc
cagtcctggatggttccgtccgtgcaagttagcttctatgatgcagatgaactcaagtct
gaggtatcctggataccaaacaaacactattcaggaatttatggcctgatgaagctgacc
cttaccaaagccctgccctccgacctctccaaggtcattgtcttggatacggacatcacc
tttgccactgatatagcagaactgtggtccatctttaggaggttcacagagaagcaggtg
attggactagtggagaaccagagtgattggtacctgggcaacctgtggaaaaatcacaag
ccatggcctgcgctagggagaggcttcaacacaggagtaattctgctgtatttggaaaag
ctccgtcggatgggctgggagcagatgtggcgtctgacagccgagcgtgagctaatgaac
atgctctccacctcgctggccgaccaggacatctttaatgccttcataaagcagaacccc
gtcctggtgcaccagctgccttgcttctggaacgtgcagctgtcggaccacacgcggtct
gagcagtgctacaccgaggtgtctgatctgaaggtgatccactggaactcccccaagaag
ctgcgagtgaagaacaaacatgtggaatttttccgcaacctttacctgacgttcctggag
tacgatgggaatcttcttcgacgggagctctttggttgccccagccaggccacctctgag
atcacacagcttcaaggagctttggaggagcttgatgaggatgaccagtgctatgagttc
cgacgagagcgaatcacattgcaccgagttcacctctacttcctgcagtatgaatacaca
ccaaccaatgataacactgatgtgactctggttgcccagctttccatggacagacttcaa
atgcttgaggcgatttgtaagcactgggagggccccattagtttggctctctacatgtct
gatgccgaggcgcagcagttcttacgctacgcccaggcctccgaggtgctcaagaaccgc
aagaacgttggctaccacatcgtctacaaagagggccagttctacccggttaacctggtc
cgcaatgtggccctgcgcaatgccaacacaccgtatgtgtttctgactgatgtggacttc
ctacccatgtatggcctctatgaatacctcagaaaatctattgttcagttggacatggcc
aacactaagaaggctctggtggtgccggcctttgagactctgcggtatcgcctctccttt
cccaaatccaaagctgagcttctctccatgctggacatggggaccctttacaccttcagg
taccacgtttggaccaaaggccatgctccaactaactatgccaaatggcggaccgccacc
acaccttacaaggtagactgggaaccagattttgagccctatgtggtcgtccgaagagac
tgtccagagtatgatcagagattcgtgggctttggctggaacaaagtgtcacacattatg
gaacttgatgcccaggaatatgacttggtcgtattaccaaatgcctacatgatccacatg
ccccacgctccaagttttgacatttcaaagttccgatccagtccaagttaccggtactgt
ctgaccacgctcaaggacgagttccaccaagacctttcaagaaagtatggctctgctgcg
cttaagtacctcacagcccagagaaacatctga
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