Clupea harengus (Atlantic herring): 105903109
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Entry
105903109 CDS
T09045
Symbol
chrnb1
Name
(RefSeq) acetylcholine receptor subunit beta
KO
K04812
nicotinic acetylcholine receptor beta-1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
105903109 (chrnb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
105903109 (chrnb1)
Ion channels [BR:
char04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
105903109 (chrnb1)
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Motif
Other DBs
NCBI-GeneID:
105903109
NCBI-ProteinID:
XP_012686262
Ensembl:
ENSCHAG00000016168
UniProt:
A0A6P3W0J3
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Position
18:18895060..18925254
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AA seq
493 aa
AA seq
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MKAPDLFFVVCCLYGLCCIGGATDAENTLMKSLFTGYNVKVRPAETPDQKVVVRVGMVLS
SLVALNMKDEEMNTVVIMNLAWTDYRLSWNPKDHDNVDVLRIAAGKVWLPDVVLINNNDG
VFDVALQVHVQAYSNGRVTWTPPALFRSSCGVKVTYFPFDWQNCTMVFRSYTYDSSEIDL
QYALDRKGKEIQEIVYDHTFSEGGEWRIRHNPSRKNVGEDYYEDITFYLIIERKPMFYVF
NIILPCILITIIAIFNFYLPPDAGEKMGLSINVLLTLTVFLLLLADKVPETSLGVPIIVN
YLMFTMILVTCSVILSVVVLNLHHRSPNTHEMPLWVRRIFIHLLPPYLGMLRPKVESPLS
LEIIPKKETAPTIFHHADEYFIRKPTNLTIFPKPDRFHSNGMCTDLKKFIEGPSHYTTLP
AELKSAIGAITYIAEQLQAEKDYEALKEDWQYVAMVVDRLFLWIFVVFTTVGTLAIFADA
SFNATPSDPFSGQ
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgaaggcgccggatttattcttcgtcgtatgctgtttgtatggcctctgctgtattgga
ggggctactgatgcggagaacaccctgatgaagtccctcttcaccggctacaacgtcaag
gtgcgaccagccgagacacctgaccagaaagtggtggtgagggtgggcatggtcctgtca
tcactagttgccttgaacatgaaagatgaagagatgaacacagttgtcatcatgaacctg
gcatggactgactatcgactgtcttggaaccccaaagaccatgataatgttgacgtgctg
cgtatcgccgctggaaaagtatggctccctgacgtcgtcctcatcaacaataatgacgga
gtgtttgatgttgccctccaagtccatgttcaggcctacagtaacggcagggtcacctgg
actccccctgccctcttccgcagctcctgtggagtcaaggtgacctattttccctttgac
tggcagaactgcaccatggtgtttcgctcatacacatatgactcctccgagatcgacctg
cagtacgcgctggacaggaaaggcaaggagatccaggagatcgtctacgaccacaccttc
agcgagggcggggagtggcgcatccgtcacaatccgtcgcgtaagaatgtgggagaggac
tactacgaggacatcacgttctacctgatcatcgagcgcaagcccatgttctacgtgttc
aacatcatcctgccctgcatcctcatcaccatcatagccatcttcaacttctacctgccg
cccgacgcaggagagaagatgggtctgtccattaacgtgctgctgaccctgactgtgttc
ctgttgctgctggccgataaggttcctgagacgtctctgggtgtgcccatcatcgtcaac
tacctcatgttcaccatgatcctcgtcacctgttccgtcatcctcagcgtggtcgtgctc
aacctccaccatcgctcgcccaacacgcatgaaatgcccctgtgggtgcgcaggatcttc
atccacctgctcccgccctacctggggatgctgcggcccaaagtggagtctcccttgtcc
ctggagatcattcccaagaaggaaaccgccccgaccatcttccaccacgccgatgagtac
ttcatccgcaaaccaaccaacctcaccatcttccccaagcctgacaggttccactcgaat
ggtatgtgcactgacctgaaaaagttcattgaaggtccaagtcactacaccacgctgccc
gccgagctcaagtccgccatcggtgccatcacctacatcgcagagcaacttcaggctgag
aaggactacgaagcgctgaaggaagattggcagtacgttgccatggtagtggaccggctc
tttctgtggatctttgtggtttttaccactgtgggcacattggccatctttgctgatgcc
agtttcaatgccacgcccagtgaccccttcagtggccaatga
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