Clupea harengus (Atlantic herring): 105903120
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Entry
105903120 CDS
T09045
Symbol
rbm4.1
Name
(RefSeq) RNA-binding protein 4.1
KO
K13187
RNA-binding protein 4
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
char03041
]
105903120 (rbm4.1)
Spliceosome [BR:
char03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
105903120 (rbm4.1)
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
zf-CCHC
RRM_5
RRM_occluded
RRM_7
Calcipressin
zf-CCHC_3
zf-CCHC_2
MAP1B_neuraxin
zf-CCHC_5
Motif
Other DBs
NCBI-GeneID:
105903120
NCBI-ProteinID:
XP_012686276
Ensembl:
ENSCHAG00000005467
UniProt:
A0A6P3W2B2
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All DBs
Position
18:19068910..19073213
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AA seq
424 aa
AA seq
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MVKIFIGNLSPNTTTEELRALFSQYGKISECDIVKNFGFVHMDDKAEAEEAIRNLHHYEL
NGQAMNVELSRGKPRASTKLHVGNISCSCTNQELRAKFEEYGPVVECDIVKDYAFVHMER
VEDAMEAISGLDNTAFQGKLMSVKLSTSRLRTVPGMGERTGCYRCGQEGHWSKECPLDQN
GSYREGAMGPDESNGFGPPRFGGRGRGFHRGFNGADPGFGGSFAPSHGISRGGAYGGEGP
GYGRGATGYESAMGYGVPPGYGMAADPSLARAYGSEAAAYGGAAASYGAAMPGYPARRSA
YDERDPYGVVDFYEKYRARPYGGSYFEDRRAVPMPTPPPPTSSIMRDRLSSSSLDPYERR
PLPPPPAPGSSYYSRDRSPIRRVPPEAEGYSYERSRLSPVSSLPRTSAYDLPRDPYAERA
RYAY
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaatattcattggcaacctgtcccccaacacaacaacggaggaactccgtgcc
ctcttctctcaatatggcaagatttcagagtgcgacatcgtcaaaaacttcggctttgta
cacatggatgataaagcagaggcggaagaggccatccgcaacctccaccactatgagtta
aacggtcaggccatgaacgtggagctgagtcgaggcaagcccagggcctctacgaagctc
cacgttggtaacatcagctgcagctgcaccaatcaggagctgcgtgccaagttcgaagag
tatggccctgtggtagagtgtgacattgtgaaggactatgcatttgtgcatatggagcga
gtagaggatgccatggaggcaatcagtggactcgacaacaccgcctttcaaggcaaactg
atgagtgtgaagctctcaactagccgcctgcgcaccgtgccggggatgggagagaggacg
ggttgttatcggtgcgggcaggaaggccactggtctaaagagtgccctttggaccagaat
ggctcctatcgcgaaggagccatggggcccgacgagtccaacggattcggtcccccgagg
ttcggtggtcgcggccgcgggttccatcgtggcttcaatggggctgacccgggcttcggc
ggcagctttgcgccctctcatggcatcagcaggggcggggcttacggcggcgagggaccc
ggttacggccggggtgccacgggctatgagagcgctatgggttacggcgtgcctccgggt
tatggcatggcggcggaccctagcctggctcgtgcatacggaagcgaagcagcggcttat
gggggcgcggcagccagttatggtgcggcgatgccagggtaccctgctcggcggtccgcc
tacgacgagcgagatccgtacggtgtggtggacttctacgagaagtatcgggcgcgtccg
tacggtggcagttatttcgaagatcgacgcgctgttcccatgcccacccctcctcctccc
acctcctccatcatgagggatcgcttgtcctcctctagccttgacccgtatgagcggcgc
cccctaccccctccaccagctcctggctcctcgtactactcccgcgatcgaagcccaatc
cgacgcgtgcctcccgaggcagagggctactcatacgaacgctcgcggctctccccggtc
tcctcgcttccccggacctccgcgtatgacctgccgcgggatccctacgcagaacgggcg
cgctatgcttattag
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